RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A MRD1Q06106 887 aaKnown RBP18.36■□□□□ 0.53
TRN1tP(UGG)A KEL3Q08979 651 aaPredicted RBP18.36■□□□□ 0.53
TRN1tP(UGG)A CHO2P05374 869 aaKnown RBP18.35■□□□□ 0.53
TRN1tP(UGG)A SKI2P35207 1287 aaKnown RBP RIP-Chip data18.35■□□□□ 0.53not detected
TRN1tP(UGG)A AAD16Q02895 342 aa18.35■□□□□ 0.53
TRN1tP(UGG)A PGA3Q12746 312 aaKnown RBP18.35■□□□□ 0.53
TRN1tP(UGG)A RTS1P38903 757 aa18.34■□□□□ 0.53
TRN1tP(UGG)A PEA2P40091 420 aa18.34■□□□□ 0.53
TRN1tP(UGG)A KRI1P42846 591 aaKnown RBP18.34■□□□□ 0.53
TRN1tP(UGG)A UFD2P54860 961 aa18.34■□□□□ 0.53
TRN1tP(UGG)A PCL8Q08966 492 aa18.34■□□□□ 0.53
TRN1tP(UGG)A ADP1P25371 1049 aa18.33■□□□□ 0.52
TRN1tP(UGG)A NIT1P40447 199 aa18.33■□□□□ 0.52
TRN1tP(UGG)A IMP2'P32351 346 aa18.32■□□□□ 0.52
TRN1tP(UGG)A PMA1P05030 918 aaKnown RBP18.31■□□□□ 0.52
TRN1tP(UGG)A MSH4P40965 878 aaPredicted RBP18.31■□□□□ 0.52
TRN1tP(UGG)A RPS15Q01855 142 aaKnown RBP18.31■□□□□ 0.52
TRN1tP(UGG)A SPN1Q06505 410 aaPredicted RBP18.3■□□□□ 0.52
TRN1tP(UGG)A KEL1P38853 1164 aaKnown RBP18.29■□□□□ 0.52
TRN1tP(UGG)A AIM9P40053 627 aaKnown RBP18.29■□□□□ 0.52
TRN1tP(UGG)A VID27P40157 782 aa18.29■□□□□ 0.52
TRN1tP(UGG)A CWC15Q03772 175 aaKnown RBP18.29■□□□□ 0.52
TRN1tP(UGG)A RAD61Q99359 647 aa18.29■□□□□ 0.52
TRN1tP(UGG)A TRL1P09880 827 aaKnown RBP18.28■□□□□ 0.52
TRN1tP(UGG)A RAD53P22216 821 aa18.28■□□□□ 0.52
TRN1tP(UGG)A PEP3P27801 918 aa18.28■□□□□ 0.52
TRN1tP(UGG)A YBL028CP38202 106 aa18.28■□□□□ 0.52
TRN1tP(UGG)A CRG1P38892 291 aaRIP-Chip data18.28■□□□□ 0.52not detected
TRN1tP(UGG)A ESF1Q06344 628 aaKnown RBP18.27■□□□□ 0.52
TRN1tP(UGG)A YDL124WQ07551 312 aaKnown RBP18.27■□□□□ 0.52
TRN1tP(UGG)A CSR2Q12734 1121 aa18.27■□□□□ 0.52
TRN1tP(UGG)A SPO22P40511 975 aa18.26■□□□□ 0.51
TRN1tP(UGG)A RNR2P09938 399 aaKnown RBP18.25■□□□□ 0.51
TRN1tP(UGG)A GAL2P13181 574 aa18.25■□□□□ 0.51
TRN1tP(UGG)A RER2P35196 286 aa18.25■□□□□ 0.51
TRN1tP(UGG)A YIR014WP40570 242 aa18.25■□□□□ 0.51
TRN1tP(UGG)A RLF2Q12495 606 aa18.25■□□□□ 0.51
TRN1tP(UGG)A YIL089WP40500 205 aa18.24■□□□□ 0.51
TRN1tP(UGG)A MPH3P0CE00 602 aa18.23■□□□□ 0.51
TRN1tP(UGG)A KIN1P13185 1064 aa18.23■□□□□ 0.51
TRN1tP(UGG)A PRE8P23639 250 aa18.23■□□□□ 0.51
TRN1tP(UGG)A TUB2P02557 457 aaKnown RBP18.22■□□□□ 0.51
TRN1tP(UGG)A ANP1P32629 500 aa18.22■□□□□ 0.51
TRN1tP(UGG)A RIT1P23796 513 aa18.21■□□□□ 0.51
TRN1tP(UGG)A PRO3P32263 286 aaKnown RBP18.21■□□□□ 0.51
TRN1tP(UGG)A MYO3P36006 1272 aa18.21■□□□□ 0.51
TRN1tP(UGG)A TPS3P38426 1054 aaKnown RBP18.21■□□□□ 0.51
TRN1tP(UGG)A SNU71P53207 620 aaKnown RBP18.21■□□□□ 0.51
TRN1tP(UGG)A HDA1P53973 706 aa18.21■□□□□ 0.51
TRN1tP(UGG)A SRM1P21827 482 aa18.2■□□□□ 0.5
TRN1tP(UGG)A CST26P38226 397 aa18.2■□□□□ 0.5
TRN1tP(UGG)A PNT1P38969 423 aa18.2■□□□□ 0.5
TRN1tP(UGG)A VPS8P39702 1274 aa18.2■□□□□ 0.5
TRN1tP(UGG)A VID28P40547 921 aa18.2■□□□□ 0.5
TRN1tP(UGG)A SPT21P35209 758 aa18.19■□□□□ 0.5
TRN1tP(UGG)A EST2Q06163 884 aa18.19■□□□□ 0.5
TRN1tP(UGG)A PFK2P16862 959 aaKnown RBP RIP-Chip data18.18■□□□□ 0.5not detected
TRN1tP(UGG)A SIS2P36024 562 aa18.18■□□□□ 0.5
TRN1tP(UGG)A PTK2P47116 818 aaKnown RBP18.18■□□□□ 0.5
TRN1tP(UGG)A ARP5P53946 755 aa18.17■□□□□ 0.5
TRN1tP(UGG)A TSR3Q12094 313 aaKnown RBP18.17■□□□□ 0.5
TRN1tP(UGG)A SKG3Q06315 1026 aa18.16■□□□□ 0.5
TRN1tP(UGG)A TFC6Q06339 672 aa18.16■□□□□ 0.5
TRN1tP(UGG)A LAP2Q10740 671 aa18.16■□□□□ 0.5
TRN1tP(UGG)A CHS3P29465 1165 aa18.15■□□□□ 0.5
TRN1tP(UGG)A GIN4Q12263 1142 aa18.15■□□□□ 0.5
TRN1tP(UGG)A SRS2P12954 1174 aa18.14■□□□□ 0.49
TRN1tP(UGG)A ACA1P39970 489 aa18.14■□□□□ 0.49
TRN1tP(UGG)A RRT6P53117 311 aaPredicted RBP18.14■□□□□ 0.49
TRN1tP(UGG)A ACE2P21192 770 aa18.13■□□□□ 0.49
TRN1tP(UGG)A FBP26P32604 452 aa18.13■□□□□ 0.49
TRN1tP(UGG)A PEX29Q03370 554 aa18.13■□□□□ 0.49
TRN1tP(UGG)A TYW1Q08960 810 aaKnown RBP18.13■□□□□ 0.49
TRN1tP(UGG)A CSM2P40465 213 aa18.12■□□□□ 0.49
TRN1tP(UGG)A ECM23Q02710 187 aa18.12■□□□□ 0.49
TRN1tP(UGG)A MAK31P23059 88 aa18.11■□□□□ 0.49
TRN1tP(UGG)A YKE2P52553 114 aa18.11■□□□□ 0.49
TRN1tP(UGG)A PCT1P13259 424 aa18.1■□□□□ 0.49
TRN1tP(UGG)A RPT6Q01939 405 aaKnown RBP18.1■□□□□ 0.49
TRN1tP(UGG)A MYO5Q04439 1219 aaKnown RBP18.09■□□□□ 0.49
TRN1tP(UGG)A TOM1Q03280 3268 aa18.08■□□□□ 0.49
TRN1tP(UGG)A MATALPHA2P0CY08 210 aa18.08■□□□□ 0.48
TRN1tP(UGG)A HMLALPHA2P0CY09 210 aa18.08■□□□□ 0.48
TRN1tP(UGG)A TIF4631P39935 952 aaKnown RBP18.08■□□□□ 0.48
TRN1tP(UGG)A ALG2P43636 503 aa18.08■□□□□ 0.48
TRN1tP(UGG)A VPS30Q02948 557 aa18.08■□□□□ 0.48
TRN1tP(UGG)A VPS20Q04272 221 aa18.08■□□□□ 0.48
TRN1tP(UGG)A KRS1P15180 591 aaKnown RBP18.07■□□□□ 0.48
TRN1tP(UGG)A SAM2P19358 384 aaKnown RBP18.07■□□□□ 0.48
TRN1tP(UGG)A RPL8BP29453 256 aaKnown RBP18.07■□□□□ 0.48
TRN1tP(UGG)A AKR1P39010 764 aa18.07■□□□□ 0.48
TRN1tP(UGG)A EPL1P43572 832 aa18.07■□□□□ 0.48
TRN1tP(UGG)A FOL1P53848 824 aa18.07■□□□□ 0.48
TRN1tP(UGG)A MYO1P08964 1928 aa18.06■□□□□ 0.48
TRN1tP(UGG)A TUS1Q06412 1307 aa18.06■□□□□ 0.48
TRN1tP(UGG)A PCS60P38137 543 aaKnown RBP RIP-Chip data18.06■□□□□ 0.48not detected
TRN1tP(UGG)A CTF18P49956 741 aa18.06■□□□□ 0.48
TRN1tP(UGG)A YOR111WQ99210 232 aa18.06■□□□□ 0.48
TRN1tP(UGG)A ENT3P47160 408 aa18.05■□□□□ 0.48
TRN1tP(UGG)A OPY1P38271 328 aa18.04■□□□□ 0.48
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms