RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W LYS14P40971 790 aa12.37□□□□□ -0.43
MSF1YPR047W YDL124WQ07551 312 aaKnown RBP12.37□□□□□ -0.43
MSF1YPR047W PAH1P32567 862 aa12.37□□□□□ -0.43
MSF1YPR047W VAB2P40003 282 aa12.37□□□□□ -0.43
MSF1YPR047W PSF2P40359 213 aa12.37□□□□□ -0.43
MSF1YPR047W KEL3Q08979 651 aaPredicted RBP12.37□□□□□ -0.43
MSF1YPR047W CFT2Q12102 859 aaPredicted RBP12.37□□□□□ -0.43
MSF1YPR047W ATG1P53104 897 aa12.36□□□□□ -0.43
MSF1YPR047W FBP1P09201 348 aa12.35□□□□□ -0.43
MSF1YPR047W CDC60P26637 1090 aaKnown RBP12.35□□□□□ -0.43
MSF1YPR047W GEF1P37020 779 aa12.35□□□□□ -0.43
MSF1YPR047W PUF6Q04373 656 aaKnown RBP12.35□□□□□ -0.43
MSF1YPR047W TY3A-GQ12173 290 aa12.35□□□□□ -0.43
MSF1YPR047W TY3A-IQ99219 290 aa12.35□□□□□ -0.43
MSF1YPR047W ULP1Q02724 621 aa12.34□□□□□ -0.43
MSF1YPR047W NPL4P33755 580 aa12.33□□□□□ -0.44
MSF1YPR047W CST26P38226 397 aa12.33□□□□□ -0.44
MSF1YPR047W MLC1P53141 149 aa12.33□□□□□ -0.44
MSF1YPR047W SUB2Q07478 446 aaKnown RBP12.33□□□□□ -0.44
MSF1YPR047W MPH3P0CE00 602 aa12.32□□□□□ -0.44
MSF1YPR047W ALO1P54783 526 aaKnown RBP12.32□□□□□ -0.44
MSF1YPR047W PDR18P53756 1333 aa12.31□□□□□ -0.44
MSF1YPR047W NOT3P06102 836 aaKnown RBP12.31□□□□□ -0.44
MSF1YPR047W NMD2P38798 1089 aaKnown RBP12.31□□□□□ -0.44
MSF1YPR047W BDP1P46678 594 aa12.31□□□□□ -0.44
MSF1YPR047W LAP2Q10740 671 aa12.31□□□□□ -0.44
MSF1YPR047W EPS1P40557 701 aa12.3□□□□□ -0.44
MSF1YPR047W IRC8P47046 822 aa12.3□□□□□ -0.44
MSF1YPR047W YJL007CP47080 104 aa12.3□□□□□ -0.44
MSF1YPR047W POL32P47110 350 aa12.3□□□□□ -0.44
MSF1YPR047W YPL260WQ08977 551 aa12.3□□□□□ -0.44
MSF1YPR047W YMR147WP40218 223 aaKnown RBP12.29□□□□□ -0.44
MSF1YPR047W IOC3P43596 787 aa12.29□□□□□ -0.44
MSF1YPR047W VPS13Q07878 3144 aa12.29□□□□□ -0.44
MSF1YPR047W SRS2P12954 1174 aa12.28□□□□□ -0.44
MSF1YPR047W PRE8P23639 250 aa12.28□□□□□ -0.44
MSF1YPR047W PRS1P32895 427 aaKnown RBP12.28□□□□□ -0.44
MSF1YPR047W MAL31P38156 614 aa12.28□□□□□ -0.44
MSF1YPR047W TIF4631P39935 952 aaKnown RBP12.28□□□□□ -0.44
MSF1YPR047W ERG12P07277 443 aa12.28□□□□□ -0.44
MSF1YPR047W KRS1P15180 591 aaKnown RBP12.28□□□□□ -0.44
MSF1YPR047W SPB4P25808 606 aaPredicted RBP12.28□□□□□ -0.44
MSF1YPR047W ECM21P38167 1117 aaKnown RBP12.28□□□□□ -0.44
MSF1YPR047W PER1P25625 357 aa12.27□□□□□ -0.45
MSF1YPR047W FUN12P39730 1002 aaKnown RBP12.27□□□□□ -0.45
MSF1YPR047W DIT2P21595 489 aa12.26□□□□□ -0.45
MSF1YPR047W SRM1P21827 482 aa12.26□□□□□ -0.45
MSF1YPR047W PBY1P38254 753 aa12.26□□□□□ -0.45
MSF1YPR047W ENP2P48234 707 aaKnown RBP12.26□□□□□ -0.45
MSF1YPR047W VPS62P53285 467 aa12.26□□□□□ -0.45
MSF1YPR047W KAR5Q04746 504 aa12.26□□□□□ -0.45
MSF1YPR047W UBX5Q06682 500 aa12.26□□□□□ -0.45
MSF1YPR047W LDH1P38139 375 aa12.24□□□□□ -0.45
MSF1YPR047W YML037CQ03703 340 aa12.24□□□□□ -0.45
MSF1YPR047W ICL2Q12031 575 aa12.24□□□□□ -0.45
MSF1YPR047W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.24□□□□□ -0.45not detected
MSF1YPR047W PKC1P24583 1151 aa12.23□□□□□ -0.45
MSF1YPR047W PIB2P53191 635 aa12.23□□□□□ -0.45
MSF1YPR047W EUG1P32474 517 aa12.22□□□□□ -0.45
MSF1YPR047W SKG3Q06315 1026 aa12.22□□□□□ -0.45
MSF1YPR047W VMA2P16140 517 aaKnown RBP12.21□□□□□ -0.45
MSF1YPR047W YKR023WP36119 530 aaKnown RBP12.21□□□□□ -0.45
MSF1YPR047W OSH3P38713 996 aaKnown RBP12.21□□□□□ -0.45
MSF1YPR047W RTS1P38903 757 aa12.21□□□□□ -0.45
MSF1YPR047W FPR3P38911 411 aaKnown RBP12.2□□□□□ -0.46
MSF1YPR047W MXR1P40029 184 aa12.2□□□□□ -0.46
MSF1YPR047W BBC1P47068 1157 aa12.2□□□□□ -0.46
MSF1YPR047W RMD1Q03441 430 aa12.2□□□□□ -0.46
MSF1YPR047W YHL050CP38721 697 aa12.2□□□□□ -0.46
MSF1YPR047W VID27P40157 782 aa12.2□□□□□ -0.46
MSF1YPR047W MRD1Q06106 887 aaKnown RBP12.2□□□□□ -0.46
MSF1YPR047W TAH18Q12181 623 aa12.2□□□□□ -0.46
MSF1YPR047W GPB2P39717 880 aa12.19□□□□□ -0.46
MSF1YPR047W SLN1P39928 1220 aaPredicted RBP12.19□□□□□ -0.46
MSF1YPR047W MRPS35P53292 345 aa12.19□□□□□ -0.46
MSF1YPR047W PKH3Q03306 898 aaPredicted RBP12.19□□□□□ -0.46
MSF1YPR047W MET7Q08645 548 aa12.19□□□□□ -0.46
MSF1YPR047W YOR131CQ12486 218 aa12.19□□□□□ -0.46
MSF1YPR047W RAD61Q99359 647 aa12.19□□□□□ -0.46
MSF1YPR047W PRE10P21242 288 aaKnown RBP RIP-Chip data12.18□□□□□ -0.46not detected
MSF1YPR047W RRP8P38961 392 aaKnown RBP12.18□□□□□ -0.46
MSF1YPR047W YAF9P53930 226 aa12.18□□□□□ -0.46
MSF1YPR047W BRE1Q07457 700 aaKnown RBP12.18□□□□□ -0.46
MSF1YPR047W COQ1P18900 473 aa12.17□□□□□ -0.46
MSF1YPR047W CHS3P29465 1165 aa12.17□□□□□ -0.46
MSF1YPR047W CLA4P48562 842 aa12.17□□□□□ -0.46
MSF1YPR047W LAM4P38800 1345 aa12.17□□□□□ -0.46
MSF1YPR047W KTR1P27810 393 aaKnown RBP12.16□□□□□ -0.46
MSF1YPR047W PRY3P47033 881 aa12.16□□□□□ -0.46
MSF1YPR047W SOL4P53315 255 aa12.16□□□□□ -0.46
MSF1YPR047W SUT2Q12286 268 aa12.16□□□□□ -0.46
MSF1YPR047W CDC16P09798 840 aa12.15□□□□□ -0.46
MSF1YPR047W RFC1P38630 861 aaKnown RBP12.15□□□□□ -0.46
MSF1YPR047W BRE5P53741 515 aaKnown RBP12.15□□□□□ -0.46
MSF1YPR047W ECM30Q06673 1274 aa12.15□□□□□ -0.46
MSF1YPR047W TUS1Q06412 1307 aa12.15□□□□□ -0.46
MSF1YPR047W TAO3P40468 2376 aa12.14□□□□□ -0.47
MSF1YPR047W YKR018CP36114 725 aa12.14□□□□□ -0.47
MSF1YPR047W VPS8P39702 1274 aa12.14□□□□□ -0.47
MSF1YPR047W AIM21P40563 679 aa12.14□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms