RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W MON2P48563 1636 aaPredicted RBP21.47■■□□□ 1.03
MSF1YPR047W INO80P53115 1489 aa21.42■■□□□ 1.02
MSF1YPR047W SWR1Q05471 1514 aa20.49■□□□□ 0.87
MSF1YPR047W TCB3Q03640 1545 aaKnown RBP20.44■□□□□ 0.86
MSF1YPR047W DNA2P38859 1522 aa20.43■□□□□ 0.86
MSF1YPR047W TY1B-DR4Q07793 1604 aa20.36■□□□□ 0.85
MSF1YPR047W SGS1P35187 1447 aa20.2■□□□□ 0.82
MSF1YPR047W KOG1P38873 1557 aa20.16■□□□□ 0.82
MSF1YPR047W HSL1P34244 1518 aa19.69■□□□□ 0.74
MSF1YPR047W SPT6P23615 1451 aaKnown RBP19.65■□□□□ 0.74
MSF1YPR047W RSE1Q04693 1361 aaKnown RBP19.61■□□□□ 0.73
MSF1YPR047W SPA2P23201 1466 aaKnown RBP19.48■□□□□ 0.71
MSF1YPR047W HIR3P47171 1648 aa19.26■□□□□ 0.67
MSF1YPR047W ECM5Q03214 1411 aa19.18■□□□□ 0.66
MSF1YPR047W THO2P53552 1597 aaKnown RBP19.08■□□□□ 0.64
MSF1YPR047W BUD4P47136 1447 aa19.06■□□□□ 0.64
MSF1YPR047W XRN1P22147 1528 aaKnown RBP18.92■□□□□ 0.62
MSF1YPR047W MDS3P53094 1487 aa18.86■□□□□ 0.61
MSF1YPR047W MTC1P47018 478 aaKnown RBP18.68■□□□□ 0.58
MSF1YPR047W PEP1P32319 1579 aa18.68■□□□□ 0.58
MSF1YPR047W SSN2P38931 1420 aa18.64■□□□□ 0.58
MSF1YPR047W ATG2P53855 1592 aa18.6■□□□□ 0.57
MSF1YPR047W REV3P14284 1504 aa18.58■□□□□ 0.57
MSF1YPR047W BPT1P14772 1559 aa18.37■□□□□ 0.53
MSF1YPR047W SIN3P22579 1536 aa18.36■□□□□ 0.53
MSF1YPR047W TAF2P23255 1407 aa18.34■□□□□ 0.53
MSF1YPR047W SKI3P17883 1432 aaKnown RBP18.31■□□□□ 0.52
MSF1YPR047W SSK2P53599 1579 aa18.21■□□□□ 0.51
MSF1YPR047W ESP1Q03018 1630 aa18.13■□□□□ 0.49
MSF1YPR047W YCF1P39109 1515 aaKnown RBP18.06■□□□□ 0.48
MSF1YPR047W DRS1P32892 752 aaKnown RBP18.02■□□□□ 0.48
MSF1YPR047W UFD4P33202 1483 aa17.97■□□□□ 0.47
MSF1YPR047W MYO2P19524 1574 aaKnown RBP17.9■□□□□ 0.46
MSF1YPR047W YPK9Q12697 1472 aa17.9■□□□□ 0.46
MSF1YPR047W SCC2Q04002 1493 aa17.88■□□□□ 0.45
MSF1YPR047W RPO31P04051 1460 aa17.77■□□□□ 0.44
MSF1YPR047W CDC25P04821 1589 aa17.69■□□□□ 0.42
MSF1YPR047W CHD1P32657 1468 aa17.66■□□□□ 0.42
MSF1YPR047W TY2B-LR1P0C2J3 1770 aa17.65■□□□□ 0.42
MSF1YPR047W TY2B-FP0CX63 1770 aa17.65■□□□□ 0.42
MSF1YPR047W TY2B-GR2P0CX64 1770 aa17.65■□□□□ 0.42
MSF1YPR047W TY2B-CP25384 1770 aa17.65■□□□□ 0.42
MSF1YPR047W TY2B-DR2Q03494 1770 aa17.65■□□□□ 0.42
MSF1YPR047W TY1B-DR1Q03855 1755 aa17.65■□□□□ 0.42
MSF1YPR047W TY2B-DR3Q07791 1770 aaKnown RBP17.65■□□□□ 0.42
MSF1YPR047W TY2B-OR1Q12113 1770 aa17.65■□□□□ 0.42
MSF1YPR047W TY2B-DR1Q12472 1770 aa17.65■□□□□ 0.42
MSF1YPR047W TY2B-OR2Q12501 1770 aa17.65■□□□□ 0.42
MSF1YPR047W ESC1Q03661 1658 aaKnown RBP17.59■□□□□ 0.41
MSF1YPR047W DNF1P32660 1571 aa17.58■□□□□ 0.4
MSF1YPR047W TY1B-BRQ12193 1756 aa17.56■□□□□ 0.4
MSF1YPR047W TY1B-GR3Q12316 1755 aa17.56■□□□□ 0.4
MSF1YPR047W TY1B-ORQ92393 1755 aa17.56■□□□□ 0.4
MSF1YPR047W RQC2Q12532 1038 aaKnown RBP17.55■□□□□ 0.4
MSF1YPR047W MET5P47169 1442 aa17.54■□□□□ 0.4
MSF1YPR047W PAN1P32521 1480 aa17.5■□□□□ 0.39
MSF1YPR047W TOP2P06786 1428 aaKnown RBP17.49■□□□□ 0.39
MSF1YPR047W TY2B-BQ12491 1770 aa17.44■□□□□ 0.38
MSF1YPR047W RKR1Q04781 1562 aa17.43■□□□□ 0.38
MSF1YPR047W TY1B-HO13535 1793 aa17.4■□□□□ 0.38
MSF1YPR047W TY1B-DR5P0C2I2 1755 aa17.4■□□□□ 0.38
MSF1YPR047W TY1B-DR6P0C2I3 1755 aa17.4■□□□□ 0.38
MSF1YPR047W TY1B-LR2P0C2I5 1755 aa17.4■□□□□ 0.38
MSF1YPR047W TY1B-LR3P0C2I6 1755 aaKnown RBP17.4■□□□□ 0.38
MSF1YPR047W TY1B-PR1P0C2I9 1755 aaKnown RBP17.4■□□□□ 0.38
MSF1YPR047W TY1B-PR2P0C2J0 1756 aa17.4■□□□□ 0.38
MSF1YPR047W TY1B-PR3P0C2J1 1755 aaKnown RBP17.4■□□□□ 0.38
MSF1YPR047W TY1B-JR1P47098 1755 aa17.4■□□□□ 0.38
MSF1YPR047W TY1B-ML2Q03434 1755 aaKnown RBP17.4■□□□□ 0.38
MSF1YPR047W TY1B-ER1Q03612 1755 aa17.4■□□□□ 0.38
MSF1YPR047W TY1B-ML1Q04711 1755 aaKnown RBP17.4■□□□□ 0.38
MSF1YPR047W TY1B-GR2Q12269 1755 aa17.4■□□□□ 0.38
MSF1YPR047W TY1B-OLQ12273 1755 aa17.4■□□□□ 0.38
MSF1YPR047W TY1B-PLQ12414 1755 aaKnown RBP17.4■□□□□ 0.38
MSF1YPR047W RPA190P10964 1664 aaKnown RBP17.4■□□□□ 0.38
MSF1YPR047W TY1B-DR3Q99231 1755 aa17.39■□□□□ 0.37
MSF1YPR047W POL1P13382 1468 aa17.35■□□□□ 0.37
MSF1YPR047W LTE1P07866 1435 aa17.34■□□□□ 0.37
MSF1YPR047W MMS22Q06164 1454 aa17.34■□□□□ 0.37
MSF1YPR047W TRM732Q03496 1420 aa17.24■□□□□ 0.35
MSF1YPR047W SMC4Q12267 1418 aa17.22■□□□□ 0.35
MSF1YPR047W YOR1P53049 1477 aa17.22■□□□□ 0.35
MSF1YPR047W STU1P38198 1513 aa17.21■□□□□ 0.34
MSF1YPR047W GEA2P39993 1459 aaKnown RBP17.16■□□□□ 0.34
MSF1YPR047W BNI1P41832 1953 aa17.15■□□□□ 0.34
MSF1YPR047W SPP41P38904 1435 aa17.14■□□□□ 0.33
MSF1YPR047W MIF2P35201 549 aa17.07■□□□□ 0.32
MSF1YPR047W NUP159P40477 1460 aa17.07■□□□□ 0.32
MSF1YPR047W YRF1-1P0CX20 1796 aa17.06■□□□□ 0.32
MSF1YPR047W YRF1-5P0CX21 1796 aa17.06■□□□□ 0.32
MSF1YPR047W YRF1-8P0CX22 1796 aa17.06■□□□□ 0.32
MSF1YPR047W TY1B-JR2P47100 1755 aaKnown RBP17.06■□□□□ 0.32
MSF1YPR047W TY1B-ER2Q03619 1755 aa17.06■□□□□ 0.32
MSF1YPR047W TY1B-MR1Q04214 1755 aa17.06■□□□□ 0.32
MSF1YPR047W TY1B-MR2Q04670 1755 aaKnown RBP17.06■□□□□ 0.32
MSF1YPR047W TY1B-LR1Q12088 1755 aaKnown RBP17.06■□□□□ 0.32
MSF1YPR047W TY1B-NL1Q12112 1755 aa17.06■□□□□ 0.32
MSF1YPR047W TY1B-GR1Q12141 1755 aa17.06■□□□□ 0.32
MSF1YPR047W TY1B-BLQ12490 1755 aa17.06■□□□□ 0.32
MSF1YPR047W ITT1Q04638 464 aa17.04■□□□□ 0.32
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms