RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	NOP2	P40991	618 aa	Known RBP	12.67	□□□□□ -0.38
PEX25	YPL112C	IRC8	P47046	822 aa		12.67	□□□□□ -0.38
PEX25	YPL112C	RBA50	Q04418	439 aa		12.67	□□□□□ -0.38
PEX25	YPL112C	PPM2	Q08282	695 aa		12.67	□□□□□ -0.38
PEX25	YPL112C	PCL8	Q08966	492 aa		12.67	□□□□□ -0.38
PEX25	YPL112C	MSH4	P40965	878 aa	Predicted RBP	12.66	□□□□□ -0.38
PEX25	YPL112C	ENP2	P48234	707 aa	Known RBP	12.66	□□□□□ -0.38
PEX25	YPL112C	PIB2	P53191	635 aa		12.66	□□□□□ -0.38
PEX25	YPL112C	MOT2	P34909	587 aa	Known RBP	12.65	□□□□□ -0.38
PEX25	YPL112C	FPR3	P38911	411 aa	Known RBP	12.65	□□□□□ -0.38
PEX25	YPL112C	MRPS35	P53292	345 aa		12.65	□□□□□ -0.38
PEX25	YPL112C	KEL3	Q08979	651 aa	Predicted RBP	12.65	□□□□□ -0.38
PEX25	YPL112C	TUB2	P02557	457 aa	Known RBP	12.64	□□□□□ -0.39
PEX25	YPL112C	CDC16	P09798	840 aa		12.64	□□□□□ -0.39
PEX25	YPL112C	NPL4	P33755	580 aa		12.64	□□□□□ -0.39
PEX25	YPL112C	JIP4	Q03361	876 aa		12.64	□□□□□ -0.39
PEX25	YPL112C	BRE1	Q07457	700 aa	Known RBP	12.64	□□□□□ -0.39
PEX25	YPL112C	OSH3	P38713	996 aa	Known RBP	12.63	□□□□□ -0.39
PEX25	YPL112C	ACA1	P39970	489 aa		12.63	□□□□□ -0.39
PEX25	YPL112C	IOC3	P43596	787 aa		12.63	□□□□□ -0.39
PEX25	YPL112C	KAR5	Q04746	504 aa		12.63	□□□□□ -0.39
PEX25	YPL112C	NKP2	Q06162	153 aa		12.63	□□□□□ -0.39
PEX25	YPL112C	YDL124W	Q07551	312 aa	Known RBP	12.63	□□□□□ -0.39
PEX25	YPL112C	KIN1	P13185	1064 aa		12.62	□□□□□ -0.39
PEX25	YPL112C	RIM101	P33400	625 aa		12.62	□□□□□ -0.39
PEX25	YPL112C	SNU71	P53207	620 aa	Known RBP	12.62	□□□□□ -0.39
PEX25	YPL112C	YPL260W	Q08977	551 aa		12.62	□□□□□ -0.39
PEX25	YPL112C	ASH1	P34233	588 aa		12.61	□□□□□ -0.39
PEX25	YPL112C	KTR1	P27810	393 aa	Known RBP	12.6	□□□□□ -0.39
PEX25	YPL112C	NCS6	P53088	359 aa		12.6	□□□□□ -0.39
PEX25	YPL112C	MPH3	P0CE00	602 aa		12.59	□□□□□ -0.39
PEX25	YPL112C	OCT1	P35999	772 aa		12.59	□□□□□ -0.39
PEX25	YPL112C	CST26	P38226	397 aa		12.59	□□□□□ -0.39
PEX25	YPL112C	STM1	P39015	273 aa	Known RBP	12.59	□□□□□ -0.39
PEX25	YPL112C	BBC1	P47068	1157 aa		12.59	□□□□□ -0.39
PEX25	YPL112C	LAM4	P38800	1345 aa		12.59	□□□□□ -0.39
PEX25	YPL112C	ECM16	Q04217	1267 aa	Known RBP	12.58	□□□□□ -0.4
PEX25	YPL112C	TAH18	Q12181	623 aa		12.58	□□□□□ -0.4
PEX25	YPL112C	RRP8	P38961	392 aa	Known RBP	12.57	□□□□□ -0.4
PEX25	YPL112C	SPR3	P41901	512 aa		12.57	□□□□□ -0.4
PEX25	YPL112C	PKH3	Q03306	898 aa	Predicted RBP	12.57	□□□□□ -0.4
PEX25	YPL112C	SGD1	Q06132	899 aa		12.57	□□□□□ -0.4
PEX25	YPL112C	PRE8	P23639	250 aa		12.56	□□□□□ -0.4
PEX25	YPL112C	YHL050C	P38721	697 aa		12.56	□□□□□ -0.4
PEX25	YPL112C	MRD1	Q06106	887 aa	Known RBP	12.56	□□□□□ -0.4
PEX25	YPL112C	LAP2	Q10740	671 aa		12.56	□□□□□ -0.4
PEX25	YPL112C	SLN1	P39928	1220 aa	Predicted RBP	12.55	□□□□□ -0.4
PEX25	YPL112C	LYS14	P40971	790 aa		12.55	□□□□□ -0.4
PEX25	YPL112C	NET1	P47035	1189 aa		12.55	□□□□□ -0.4
PEX25	YPL112C	COQ1	P18900	473 aa		12.54	□□□□□ -0.4
PEX25	YPL112C	SRM1	P21827	482 aa		12.54	□□□□□ -0.4
PEX25	YPL112C	OPI1	P21957	404 aa		12.54	□□□□□ -0.4
PEX25	YPL112C	YDJ1	P25491	409 aa	Known RBP	12.54	□□□□□ -0.4
PEX25	YPL112C	RTS1	P38903	757 aa		12.54	□□□□□ -0.4
PEX25	YPL112C	VID27	P40157	782 aa		12.54	□□□□□ -0.4
PEX25	YPL112C	YLR225C	Q05948	407 aa	Known RBP	12.54	□□□□□ -0.4
PEX25	YPL112C	FBP1	P09201	348 aa		12.53	□□□□□ -0.4
PEX25	YPL112C	IXR1	P33417	597 aa		12.53	□□□□□ -0.4
PEX25	YPL112C	MCD4	P36051	919 aa		12.53	□□□□□ -0.4
PEX25	YPL112C	ERG7	P38604	731 aa		12.53	□□□□□ -0.4
PEX25	YPL112C	TIF4631	P39935	952 aa	Known RBP	12.53	□□□□□ -0.4
PEX25	YPL112C	RIM20	Q12033	661 aa		12.53	□□□□□ -0.4
PEX25	YPL112C	RAD50	P12753	1312 aa		12.53	□□□□□ -0.4
PEX25	YPL112C	CHO2	P05374	869 aa	Known RBP	12.52	□□□□□ -0.41
PEX25	YPL112C	KRS1	P15180	591 aa	Known RBP	12.52	□□□□□ -0.41
PEX25	YPL112C	MET1	P36150	593 aa		12.52	□□□□□ -0.41
PEX25	YPL112C	VAB2	P40003	282 aa		12.52	□□□□□ -0.41
PEX25	YPL112C	RAD61	Q99359	647 aa		12.52	□□□□□ -0.41
PEX25	YPL112C	VAS1	P07806	1104 aa	Known RBP	12.51	□□□□□ -0.41
PEX25	YPL112C	SDH2	P21801	266 aa		12.51	□□□□□ -0.41
PEX25	YPL112C	SUB2	Q07478	446 aa	Known RBP	12.51	□□□□□ -0.41
PEX25	YPL112C	UFD2	P54860	961 aa		12.5	□□□□□ -0.41
PEX25	YPL112C	CFT2	Q12102	859 aa	Predicted RBP	12.5	□□□□□ -0.41
PEX25	YPL112C	ERG12	P07277	443 aa		12.49	□□□□□ -0.41
PEX25	YPL112C	SKG3	Q06315	1026 aa		12.49	□□□□□ -0.41
PEX25	YPL112C	CDC60	P26637	1090 aa	Known RBP	12.48	□□□□□ -0.41
PEX25	YPL112C	CHS3	P29465	1165 aa		12.48	□□□□□ -0.41
PEX25	YPL112C	YJL007C	P47080	104 aa		12.48	□□□□□ -0.41
PEX25	YPL112C	RPS15	Q01855	142 aa	Known RBP	12.48	□□□□□ -0.41
PEX25	YPL112C	YKR023W	P36119	530 aa	Known RBP	12.47	□□□□□ -0.41
PEX25	YPL112C	AAP1	P37898	856 aa	Known RBP	12.47	□□□□□ -0.41
PEX25	YPL112C	VPS8	P39702	1274 aa		12.47	□□□□□ -0.41
PEX25	YPL112C	YML037C	Q03703	340 aa		12.47	□□□□□ -0.41
PEX25	YPL112C	FPR4	Q06205	392 aa	Predicted RBP	12.47	□□□□□ -0.41
PEX25	YPL112C	SPB4	P25808	606 aa	Predicted RBP	12.46	□□□□□ -0.41
PEX25	YPL112C	PRO3	P32263	286 aa	Known RBP	12.46	□□□□□ -0.41
PEX25	YPL112C	ATG1	P53104	897 aa		12.46	□□□□□ -0.41
PEX25	YPL112C	SSF2	Q12153	453 aa	Predicted RBP	12.46	□□□□□ -0.41
PEX25	YPL112C	SRS2	P12954	1174 aa		12.45	□□□□□ -0.42
PEX25	YPL112C	UBX5	Q06682	500 aa		12.45	□□□□□ -0.42
PEX25	YPL112C	TY3A-G	Q12173	290 aa		12.45	□□□□□ -0.42
PEX25	YPL112C	TY3A-I	Q99219	290 aa		12.45	□□□□□ -0.42
PEX25	YPL112C	SAM2	P19358	384 aa	Known RBP	12.44	□□□□□ -0.42
PEX25	YPL112C	RIT1	P23796	513 aa		12.44	□□□□□ -0.42
PEX25	YPL112C	PER1	P25625	357 aa		12.44	□□□□□ -0.42
PEX25	YPL112C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	12.44	□□□□□ -0.42	not detected
PEX25	YPL112C	TUS1	Q06412	1307 aa		12.43	□□□□□ -0.42
PEX25	YPL112C	ACE2	P21192	770 aa		12.43	□□□□□ -0.42
PEX25	YPL112C	PAM1	P37304	830 aa	Known RBP	12.43	□□□□□ -0.42
PEX25	YPL112C	ANP1	P32629	500 aa		12.42	□□□□□ -0.42

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms