RNA–Protein interactions for RNA: YPL031C

PHO85, Transcript of Cyclin-dependent kinase, yeast

Gene PHO85, Length 918 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO85	YPL031C	ATE1	P16639	503 aa		8	□□□□□ -1.13
PHO85	YPL031C	HCA4	P20448	770 aa	Known RBP	8	□□□□□ -1.13
PHO85	YPL031C	OXP1	P28273	1286 aa		8	□□□□□ -1.13
PHO85	YPL031C	GRX7	P38068	203 aa		8	□□□□□ -1.13
PHO85	YPL031C	ALD3	P54114	506 aa		8	□□□□□ -1.13
PHO85	YPL031C	SPN1	Q06505	410 aa	Predicted RBP	8	□□□□□ -1.13
PHO85	YPL031C	PPM2	Q08282	695 aa		8	□□□□□ -1.13
PHO85	YPL031C	DPH6	Q12429	685 aa		8	□□□□□ -1.13
PHO85	YPL031C	HSP82	P02829	709 aa	Known RBP	7.99	□□□□□ -1.13
PHO85	YPL031C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	7.99	□□□□□ -1.13	not detected
PHO85	YPL031C	COQ1	P18900	473 aa		7.99	□□□□□ -1.13
PHO85	YPL031C	RER2	P35196	286 aa		7.99	□□□□□ -1.13
PHO85	YPL031C	CRG1	P38892	291 aa	RIP-Chip data	7.99	□□□□□ -1.13	not detected
PHO85	YPL031C	YER130C	P39959	443 aa		7.99	□□□□□ -1.13
PHO85	YPL031C	ICP55	P40051	511 aa		7.99	□□□□□ -1.13
PHO85	YPL031C	EST2	Q06163	884 aa		7.99	□□□□□ -1.13
PHO85	YPL031C	CYC8	P14922	966 aa		7.98	□□□□□ -1.13
PHO85	YPL031C	UBP1	P25037	809 aa		7.98	□□□□□ -1.13
PHO85	YPL031C	AKR1	P39010	764 aa		7.98	□□□□□ -1.13
PHO85	YPL031C	NUG1	P40010	520 aa	Known RBP	7.98	□□□□□ -1.13
PHO85	YPL031C	TIM50	Q02776	476 aa		7.98	□□□□□ -1.13
PHO85	YPL031C	ESC2	Q06340	456 aa		7.98	□□□□□ -1.13
PHO85	YPL031C	DIB1	Q06819	143 aa	Predicted RBP	7.98	□□□□□ -1.13
PHO85	YPL031C	BDF2	Q07442	638 aa		7.98	□□□□□ -1.13
PHO85	YPL031C	RIX7	Q07844	837 aa	Known RBP	7.98	□□□□□ -1.13
PHO85	YPL031C	CHO2	P05374	869 aa	Known RBP	7.97	□□□□□ -1.13
PHO85	YPL031C	CAF20	P12962	161 aa	Known RBP	7.97	□□□□□ -1.13
PHO85	YPL031C	DIT2	P21595	489 aa		7.97	□□□□□ -1.13
PHO85	YPL031C	FRD1	P32614	470 aa	Known RBP	7.97	□□□□□ -1.13
PHO85	YPL031C	MFT1	P33441	392 aa	Known RBP	7.97	□□□□□ -1.13
PHO85	YPL031C	MPE1	P35728	441 aa	Known RBP	7.97	□□□□□ -1.13
PHO85	YPL031C	RPN10	P38886	268 aa	Known RBP	7.97	□□□□□ -1.13
PHO85	YPL031C	FYV10	P40492	516 aa		7.97	□□□□□ -1.13
PHO85	YPL031C	IOC3	P43596	787 aa		7.97	□□□□□ -1.13
PHO85	YPL031C	TCB2	P48231	1178 aa		7.97	□□□□□ -1.13
PHO85	YPL031C	YPT11	P48559	417 aa		7.97	□□□□□ -1.13
PHO85	YPL031C	UTP22	P53254	1237 aa	Predicted RBP	7.97	□□□□□ -1.13
PHO85	YPL031C	RPT4	P53549	437 aa	Known RBP	7.97	□□□□□ -1.13
PHO85	YPL031C	HPC2	Q01448	625 aa		7.97	□□□□□ -1.13
PHO85	YPL031C	SYF1	Q04048	859 aa	Predicted RBP	7.97	□□□□□ -1.13
PHO85	YPL031C	SSA2	P10592	639 aa	Known RBP	7.96	□□□□□ -1.14
PHO85	YPL031C	PGI1	P12709	554 aa	Known RBP	7.96	□□□□□ -1.14
PHO85	YPL031C	RGP1	P16664	663 aa		7.96	□□□□□ -1.14
PHO85	YPL031C	RPT3	P33298	428 aa	Known RBP	7.96	□□□□□ -1.14
PHO85	YPL031C	EBP2	P36049	427 aa	Known RBP	7.96	□□□□□ -1.14
PHO85	YPL031C	RPN1	P38764	993 aa	Known RBP	7.96	□□□□□ -1.14
PHO85	YPL031C	RRM3	P38766	723 aa		7.96	□□□□□ -1.14
PHO85	YPL031C	NOC2	P39744	710 aa	Known RBP	7.96	□□□□□ -1.14
PHO85	YPL031C	UFD2	P54860	961 aa		7.96	□□□□□ -1.14
PHO85	YPL031C	CYB2	P00175	591 aa		7.95	□□□□□ -1.14
PHO85	YPL031C	HXK1	P04806	485 aa	Known RBP	7.95	□□□□□ -1.14
PHO85	YPL031C	MPH3	P0CE00	602 aa		7.95	□□□□□ -1.14
PHO85	YPL031C	BDF1	P35817	686 aa		7.95	□□□□□ -1.14
PHO85	YPL031C	PTK1	P36002	662 aa	Predicted RBP	7.95	□□□□□ -1.14
PHO85	YPL031C	SPL2	P38839	148 aa		7.95	□□□□□ -1.14
PHO85	YPL031C	HDA1	P53973	706 aa		7.95	□□□□□ -1.14
PHO85	YPL031C	RPS15	Q01855	142 aa	Known RBP	7.95	□□□□□ -1.14
PHO85	YPL031C	GSY2	P27472	705 aa		7.94	□□□□□ -1.14
PHO85	YPL031C	SRP40	P32583	406 aa	Predicted RBP	7.94	□□□□□ -1.14
PHO85	YPL031C	NPL4	P33755	580 aa		7.94	□□□□□ -1.14
PHO85	YPL031C	MNR2	P35724	969 aa		7.94	□□□□□ -1.14
PHO85	YPL031C	YKT6	P36015	200 aa	Known RBP	7.94	□□□□□ -1.14
PHO85	YPL031C	BCH2	P36122	765 aa		7.94	□□□□□ -1.14
PHO85	YPL031C	BOI1	P38041	980 aa	Known RBP	7.94	□□□□□ -1.14
PHO85	YPL031C	RFT1	P38206	574 aa	Predicted RBP	7.94	□□□□□ -1.14
PHO85	YPL031C	SCY1	P53009	804 aa		7.94	□□□□□ -1.14
PHO85	YPL031C	IRC4	Q03036	179 aa		7.94	□□□□□ -1.14
PHO85	YPL031C	SAS4	Q04003	481 aa		7.94	□□□□□ -1.14
PHO85	YPL031C	IRC3	Q06683	689 aa		7.94	□□□□□ -1.14
PHO85	YPL031C	SWI4	P25302	1093 aa	Known RBP	7.93	□□□□□ -1.14
PHO85	YPL031C	MCM4	P30665	933 aa	Known RBP	7.93	□□□□□ -1.14
PHO85	YPL031C	MDL2	P33311	773 aa		7.93	□□□□□ -1.14
PHO85	YPL031C	GEF1	P37020	779 aa		7.93	□□□□□ -1.14
PHO85	YPL031C	PTK2	P47116	818 aa	Known RBP	7.93	□□□□□ -1.14
PHO85	YPL031C	MRD1	Q06106	887 aa	Known RBP	7.93	□□□□□ -1.14
PHO85	YPL031C	TFC6	Q06339	672 aa		7.93	□□□□□ -1.14
PHO85	YPL031C	NOP58	Q12499	511 aa	Known RBP	7.93	□□□□□ -1.14
PHO85	YPL031C	CBP3	P21560	335 aa		7.92	□□□□□ -1.14
PHO85	YPL031C	VPS1	P21576	704 aa	Known RBP	7.92	□□□□□ -1.14
PHO85	YPL031C	LCB1	P25045	558 aa	Known RBP	7.92	□□□□□ -1.14
PHO85	YPL031C	ANP1	P32629	500 aa		7.92	□□□□□ -1.14
PHO85	YPL031C	BMH2	P34730	273 aa	Known RBP	7.92	□□□□□ -1.14
PHO85	YPL031C	DCS2	Q12123	353 aa		7.92	□□□□□ -1.14
PHO85	YPL031C	CDC6	P09119	513 aa		7.91	□□□□□ -1.14
PHO85	YPL031C	KRE2	P27809	442 aa		7.91	□□□□□ -1.14
PHO85	YPL031C	TPM2	P40414	161 aa		7.91	□□□□□ -1.14
PHO85	YPL031C	YFH7	P43591	353 aa		7.91	□□□□□ -1.14
PHO85	YPL031C	STU2	P46675	888 aa		7.91	□□□□□ -1.14
PHO85	YPL031C	WAR1	Q03631	944 aa		7.91	□□□□□ -1.14
PHO85	YPL031C	CSC1	Q06538	782 aa		7.91	□□□□□ -1.14
PHO85	YPL031C	TOS1	P38288	455 aa		7.9	□□□□□ -1.14
PHO85	YPL031C	LEO1	P38439	464 aa		7.9	□□□□□ -1.14
PHO85	YPL031C	MSH4	P40965	878 aa	Predicted RBP	7.9	□□□□□ -1.14
PHO85	YPL031C	GET3	Q12154	354 aa	Known RBP	7.9	□□□□□ -1.14
PHO85	YPL031C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.9	□□□□□ -1.14	not detected
PHO85	YPL031C	URA1	P28272	314 aa	Predicted RBP	7.89	□□□□□ -1.15
PHO85	YPL031C	SAC6	P32599	642 aa	Known RBP	7.89	□□□□□ -1.15
PHO85	YPL031C	YHL050C	P38721	697 aa		7.89	□□□□□ -1.15
PHO85	YPL031C	RTS1	P38903	757 aa		7.89	□□□□□ -1.15
PHO85	YPL031C	CSM2	P40465	213 aa		7.89	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms