RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W ECM21P38167 1117 aaKnown RBP9.14□□□□□ -0.95
NUP53YMR153W MSH4P40965 878 aaPredicted RBP9.14□□□□□ -0.95
NUP53YMR153W ALO1P54783 526 aaKnown RBP9.14□□□□□ -0.95
NUP53YMR153W PBY1P38254 753 aa9.14□□□□□ -0.95
NUP53YMR153W ENP2P48234 707 aaKnown RBP9.14□□□□□ -0.95
NUP53YMR153W SNU71P53207 620 aaKnown RBP9.14□□□□□ -0.95
NUP53YMR153W RMD1Q03441 430 aa9.14□□□□□ -0.95
NUP53YMR153W YLR225CQ05948 407 aaKnown RBP9.14□□□□□ -0.95
NUP53YMR153W KIN1P13185 1064 aa9.13□□□□□ -0.95
NUP53YMR153W IXR1P33417 597 aa9.13□□□□□ -0.95
NUP53YMR153W GEF1P37020 779 aa9.13□□□□□ -0.95
NUP53YMR153W PAM1P37304 830 aaKnown RBP9.13□□□□□ -0.95
NUP53YMR153W EPS1P40557 701 aa9.13□□□□□ -0.95
NUP53YMR153W IRC8P47046 822 aa9.13□□□□□ -0.95
NUP53YMR153W MCD4P36051 919 aa9.12□□□□□ -0.95
NUP53YMR153W CST26P38226 397 aa9.12□□□□□ -0.95
NUP53YMR153W ERG7P38604 731 aa9.12□□□□□ -0.95
NUP53YMR153W LYS14P40971 790 aa9.12□□□□□ -0.95
NUP53YMR153W NET1P47035 1189 aa9.12□□□□□ -0.95
NUP53YMR153W YPL260WQ08977 551 aa9.12□□□□□ -0.95
NUP53YMR153W MPH3P0CE00 602 aa9.11□□□□□ -0.95
NUP53YMR153W YDJ1P25491 409 aaKnown RBP9.1□□□□□ -0.95
NUP53YMR153W RFC1P38630 861 aaKnown RBP9.1□□□□□ -0.95
NUP53YMR153W VAB2P40003 282 aa9.1□□□□□ -0.95
NUP53YMR153W IOC3P43596 787 aa9.1□□□□□ -0.95
NUP53YMR153W LAP2Q10740 671 aa9.1□□□□□ -0.95
NUP53YMR153W FBP1P09201 348 aa9.09□□□□□ -0.95
NUP53YMR153W NPL4P33755 580 aa9.09□□□□□ -0.95
NUP53YMR153W FPR3P38911 411 aaKnown RBP9.09□□□□□ -0.95
NUP53YMR153W ATG1P53104 897 aa9.09□□□□□ -0.95
NUP53YMR153W PIB2P53191 635 aa9.09□□□□□ -0.95
NUP53YMR153W PIB1Q06651 286 aa9.09□□□□□ -0.95
NUP53YMR153W CFT2Q12102 859 aaPredicted RBP9.09□□□□□ -0.95
NUP53YMR153W RRP8P38961 392 aaKnown RBP9.08□□□□□ -0.96
NUP53YMR153W KAR5Q04746 504 aa9.08□□□□□ -0.96
NUP53YMR153W PRE8P23639 250 aa9.07□□□□□ -0.96
NUP53YMR153W CDC60P26637 1090 aaKnown RBP9.07□□□□□ -0.96
NUP53YMR153W MRPS35P53292 345 aa9.07□□□□□ -0.96
NUP53YMR153W MRD1Q06106 887 aaKnown RBP9.07□□□□□ -0.96
NUP53YMR153W BRE1Q07457 700 aaKnown RBP9.07□□□□□ -0.96
NUP53YMR153W SRS2P12954 1174 aa9.06□□□□□ -0.96
NUP53YMR153W KRS1P15180 591 aaKnown RBP9.06□□□□□ -0.96
NUP53YMR153W MAC1P35192 417 aa9.06□□□□□ -0.96
NUP53YMR153W OSH3P38713 996 aaKnown RBP9.06□□□□□ -0.96
NUP53YMR153W SLN1P39928 1220 aaPredicted RBP9.06□□□□□ -0.96
NUP53YMR153W SUB2Q07478 446 aaKnown RBP9.06□□□□□ -0.96
NUP53YMR153W ERG12P07277 443 aa9.05□□□□□ -0.96
NUP53YMR153W SRM1P21827 482 aa9.05□□□□□ -0.96
NUP53YMR153W PAH1P32567 862 aa9.05□□□□□ -0.96
NUP53YMR153W STM1P39015 273 aaKnown RBP9.05□□□□□ -0.96
NUP53YMR153W PSF2P40359 213 aa9.05□□□□□ -0.96
NUP53YMR153W YJL007CP47080 104 aa9.05□□□□□ -0.96
NUP53YMR153W TY3A-GQ12173 290 aa9.05□□□□□ -0.96
NUP53YMR153W TAH18Q12181 623 aa9.05□□□□□ -0.96
NUP53YMR153W TY3A-IQ99219 290 aa9.05□□□□□ -0.96
NUP53YMR153W KTR1P27810 393 aaKnown RBP9.05□□□□□ -0.96
NUP53YMR153W YHL050CP38721 697 aa9.05□□□□□ -0.96
NUP53YMR153W RTS1P38903 757 aa9.05□□□□□ -0.96
NUP53YMR153W TIF4631P39935 952 aaKnown RBP9.05□□□□□ -0.96
NUP53YMR153W VID27P40157 782 aa9.05□□□□□ -0.96
NUP53YMR153W CDC16P09798 840 aa9.04□□□□□ -0.96
NUP53YMR153W BBC1P47068 1157 aa9.04□□□□□ -0.96
NUP53YMR153W YML037CQ03703 340 aa9.04□□□□□ -0.96
NUP53YMR153W NKP2Q06162 153 aa9.04□□□□□ -0.96
NUP53YMR153W LAM4P38800 1345 aa9.03□□□□□ -0.96
NUP53YMR153W ECM29P38737 1868 aa9.03□□□□□ -0.96
NUP53YMR153W COQ1P18900 473 aa9.03□□□□□ -0.96
NUP53YMR153W ULP1Q02724 621 aa9.03□□□□□ -0.96
NUP53YMR153W RAD61Q99359 647 aa9.03□□□□□ -0.96
NUP53YMR153W PER1P25625 357 aa9.02□□□□□ -0.97
NUP53YMR153W SPB4P25808 606 aaPredicted RBP9.02□□□□□ -0.97
NUP53YMR153W PKH3Q03306 898 aaPredicted RBP9.02□□□□□ -0.97
NUP53YMR153W UBX5Q06682 500 aa9.02□□□□□ -0.97
NUP53YMR153W VPS8P39702 1274 aa9.01□□□□□ -0.97
NUP53YMR153W SKG3Q06315 1026 aa9.01□□□□□ -0.97
NUP53YMR153W CHO2P05374 869 aaKnown RBP9□□□□□ -0.97
NUP53YMR153W VMA2P16140 517 aaKnown RBP9□□□□□ -0.97
NUP53YMR153W OPI1P21957 404 aa9□□□□□ -0.97
NUP53YMR153W CHS3P29465 1165 aa9□□□□□ -0.97
NUP53YMR153W MET1P36150 593 aa9□□□□□ -0.97
NUP53YMR153W UFD2P54860 961 aa9□□□□□ -0.97
NUP53YMR153W ECM16Q04217 1267 aaKnown RBP9□□□□□ -0.97
NUP53YMR153W SAM2P19358 384 aaKnown RBP8.99□□□□□ -0.97
NUP53YMR153W ACE2P21192 770 aa8.99□□□□□ -0.97
NUP53YMR153W EUG1P32474 517 aa8.99□□□□□ -0.97
NUP53YMR153W PKC1P24583 1151 aa8.98□□□□□ -0.97
NUP53YMR153W VPS62P53285 467 aa8.98□□□□□ -0.97
NUP53YMR153W RPS15Q01855 142 aaKnown RBP8.98□□□□□ -0.97
NUP53YMR153W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
NUP53YMR153W VAS1P07806 1104 aaKnown RBP8.97□□□□□ -0.97
NUP53YMR153W DIT2P21595 489 aa8.97□□□□□ -0.97
NUP53YMR153W PRO3P32263 286 aaKnown RBP8.97□□□□□ -0.97
NUP53YMR153W ICL2Q12031 575 aa8.97□□□□□ -0.97
NUP53YMR153W RIM20Q12033 661 aa8.97□□□□□ -0.97
NUP53YMR153W RIT1P23796 513 aa8.97□□□□□ -0.97
NUP53YMR153W LDH1P38139 375 aa8.97□□□□□ -0.97
NUP53YMR153W SOL4P53315 255 aa8.97□□□□□ -0.97
NUP53YMR153W YAF9P53930 226 aa8.97□□□□□ -0.97
NUP53YMR153W SSF2Q12153 453 aaPredicted RBP8.97□□□□□ -0.97
NUP53YMR153W YOR131CQ12486 218 aa8.97□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms