RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W MON2P48563 1636 aaPredicted RBP15.61■□□□□ 0.09
NUP53YMR153W INO80P53115 1489 aa15.55■□□□□ 0.08
NUP53YMR153W TCB3Q03640 1545 aaKnown RBP14.95□□□□□ -0.02
NUP53YMR153W SWR1Q05471 1514 aa14.94□□□□□ -0.02
NUP53YMR153W TY1B-DR4Q07793 1604 aa14.9□□□□□ -0.02
NUP53YMR153W DNA2P38859 1522 aa14.84□□□□□ -0.03
NUP53YMR153W SGS1P35187 1447 aa14.82□□□□□ -0.04
NUP53YMR153W KOG1P38873 1557 aa14.69□□□□□ -0.06
NUP53YMR153W HSL1P34244 1518 aa14.43□□□□□ -0.1
NUP53YMR153W SPT6P23615 1451 aaKnown RBP14.4□□□□□ -0.1
NUP53YMR153W SPA2P23201 1466 aaKnown RBP14.31□□□□□ -0.12
NUP53YMR153W RSE1Q04693 1361 aaKnown RBP14.2□□□□□ -0.14
NUP53YMR153W HIR3P47171 1648 aa14.12□□□□□ -0.15
NUP53YMR153W ECM5Q03214 1411 aa13.98□□□□□ -0.17
NUP53YMR153W THO2P53552 1597 aaKnown RBP13.96□□□□□ -0.18
NUP53YMR153W BUD4P47136 1447 aa13.92□□□□□ -0.18
NUP53YMR153W XRN1P22147 1528 aaKnown RBP13.89□□□□□ -0.19
NUP53YMR153W MDS3P53094 1487 aa13.79□□□□□ -0.2
NUP53YMR153W SSN2P38931 1420 aa13.75□□□□□ -0.21
NUP53YMR153W REV3P14284 1504 aa13.67□□□□□ -0.22
NUP53YMR153W PEP1P32319 1579 aa13.64□□□□□ -0.23
NUP53YMR153W ATG2P53855 1592 aa13.64□□□□□ -0.23
NUP53YMR153W MTC1P47018 478 aaKnown RBP13.63□□□□□ -0.23
NUP53YMR153W TAF2P23255 1407 aa13.5□□□□□ -0.25
NUP53YMR153W SIN3P22579 1536 aa13.5□□□□□ -0.25
NUP53YMR153W BPT1P14772 1559 aa13.44□□□□□ -0.26
NUP53YMR153W SKI3P17883 1432 aaKnown RBP13.43□□□□□ -0.26
NUP53YMR153W SSK2P53599 1579 aa13.41□□□□□ -0.26
NUP53YMR153W ESP1Q03018 1630 aa13.37□□□□□ -0.27
NUP53YMR153W DRS1P32892 752 aaKnown RBP13.3□□□□□ -0.28
NUP53YMR153W MYO2P19524 1574 aaKnown RBP13.21□□□□□ -0.29
NUP53YMR153W YCF1P39109 1515 aaKnown RBP13.2□□□□□ -0.3
NUP53YMR153W UFD4P33202 1483 aa13.16□□□□□ -0.3
NUP53YMR153W YPK9Q12697 1472 aa13.12□□□□□ -0.31
NUP53YMR153W SCC2Q04002 1493 aa13.12□□□□□ -0.31
NUP53YMR153W TY2B-LR1P0C2J3 1770 aa13.01□□□□□ -0.33
NUP53YMR153W TY2B-FP0CX63 1770 aa13.01□□□□□ -0.33
NUP53YMR153W TY2B-GR2P0CX64 1770 aa13.01□□□□□ -0.33
NUP53YMR153W TY2B-CP25384 1770 aa13.01□□□□□ -0.33
NUP53YMR153W TY2B-DR2Q03494 1770 aa13.01□□□□□ -0.33
NUP53YMR153W TY1B-DR1Q03855 1755 aa13.01□□□□□ -0.33
NUP53YMR153W TY2B-DR3Q07791 1770 aaKnown RBP13.01□□□□□ -0.33
NUP53YMR153W TY2B-OR1Q12113 1770 aa13.01□□□□□ -0.33
NUP53YMR153W TY2B-DR1Q12472 1770 aa13.01□□□□□ -0.33
NUP53YMR153W TY2B-OR2Q12501 1770 aa13.01□□□□□ -0.33
NUP53YMR153W RPO31P04051 1460 aa13.01□□□□□ -0.33
NUP53YMR153W ESC1Q03661 1658 aaKnown RBP12.98□□□□□ -0.33
NUP53YMR153W CDC25P04821 1589 aa12.97□□□□□ -0.33
NUP53YMR153W TY1B-BRQ12193 1756 aa12.93□□□□□ -0.34
NUP53YMR153W TY1B-GR3Q12316 1755 aa12.93□□□□□ -0.34
NUP53YMR153W TY1B-ORQ92393 1755 aa12.93□□□□□ -0.34
NUP53YMR153W RQC2Q12532 1038 aaKnown RBP12.91□□□□□ -0.34
NUP53YMR153W CHD1P32657 1468 aa12.91□□□□□ -0.34
NUP53YMR153W TY2B-BQ12491 1770 aa12.87□□□□□ -0.35
NUP53YMR153W RKR1Q04781 1562 aa12.86□□□□□ -0.35
NUP53YMR153W DNF1P32660 1571 aa12.84□□□□□ -0.35
NUP53YMR153W TY1B-DR3Q99231 1755 aa12.84□□□□□ -0.35
NUP53YMR153W TY1B-HO13535 1793 aa12.83□□□□□ -0.36
NUP53YMR153W TY1B-DR5P0C2I2 1755 aa12.83□□□□□ -0.36
NUP53YMR153W TY1B-DR6P0C2I3 1755 aa12.83□□□□□ -0.36
NUP53YMR153W TY1B-LR2P0C2I5 1755 aa12.83□□□□□ -0.36
NUP53YMR153W TY1B-LR3P0C2I6 1755 aaKnown RBP12.83□□□□□ -0.36
NUP53YMR153W TY1B-PR1P0C2I9 1755 aaKnown RBP12.83□□□□□ -0.36
NUP53YMR153W TY1B-PR2P0C2J0 1756 aa12.83□□□□□ -0.36
NUP53YMR153W TY1B-PR3P0C2J1 1755 aaKnown RBP12.83□□□□□ -0.36
NUP53YMR153W TY1B-JR1P47098 1755 aa12.83□□□□□ -0.36
NUP53YMR153W TY1B-ML2Q03434 1755 aaKnown RBP12.83□□□□□ -0.36
NUP53YMR153W TY1B-ER1Q03612 1755 aa12.83□□□□□ -0.36
NUP53YMR153W TY1B-ML1Q04711 1755 aaKnown RBP12.83□□□□□ -0.36
NUP53YMR153W TY1B-GR2Q12269 1755 aa12.83□□□□□ -0.36
NUP53YMR153W TY1B-OLQ12273 1755 aa12.83□□□□□ -0.36
NUP53YMR153W TY1B-PLQ12414 1755 aaKnown RBP12.83□□□□□ -0.36
NUP53YMR153W TOP2P06786 1428 aaKnown RBP12.82□□□□□ -0.36
NUP53YMR153W PAN1P32521 1480 aa12.8□□□□□ -0.36
NUP53YMR153W RPA190P10964 1664 aaKnown RBP12.78□□□□□ -0.36
NUP53YMR153W POL1P13382 1468 aa12.76□□□□□ -0.37
NUP53YMR153W MET5P47169 1442 aa12.75□□□□□ -0.37
NUP53YMR153W MMS22Q06164 1454 aa12.72□□□□□ -0.37
NUP53YMR153W STU1P38198 1513 aa12.69□□□□□ -0.38
NUP53YMR153W YOR1P53049 1477 aa12.66□□□□□ -0.38
NUP53YMR153W SMC4Q12267 1418 aa12.64□□□□□ -0.39
NUP53YMR153W TRM732Q03496 1420 aa12.63□□□□□ -0.39
NUP53YMR153W LTE1P07866 1435 aa12.62□□□□□ -0.39
NUP53YMR153W SPP41P38904 1435 aa12.58□□□□□ -0.4
NUP53YMR153W TY1B-JR2P47100 1755 aaKnown RBP12.57□□□□□ -0.4
NUP53YMR153W TY1B-ER2Q03619 1755 aa12.57□□□□□ -0.4
NUP53YMR153W TY1B-MR1Q04214 1755 aa12.57□□□□□ -0.4
NUP53YMR153W TY1B-MR2Q04670 1755 aaKnown RBP12.57□□□□□ -0.4
NUP53YMR153W TY1B-LR1Q12088 1755 aaKnown RBP12.57□□□□□ -0.4
NUP53YMR153W TY1B-NL1Q12112 1755 aa12.57□□□□□ -0.4
NUP53YMR153W TY1B-GR1Q12141 1755 aa12.57□□□□□ -0.4
NUP53YMR153W TY1B-BLQ12490 1755 aa12.57□□□□□ -0.4
NUP53YMR153W NTE1Q04958 1679 aa12.57□□□□□ -0.4
NUP53YMR153W YRF1-1P0CX20 1796 aa12.53□□□□□ -0.4
NUP53YMR153W YRF1-5P0CX21 1796 aa12.53□□□□□ -0.4
NUP53YMR153W YRF1-8P0CX22 1796 aa12.53□□□□□ -0.4
NUP53YMR153W GEA2P39993 1459 aaKnown RBP12.53□□□□□ -0.4
NUP53YMR153W VTH1P40438 1549 aa12.51□□□□□ -0.41
NUP53YMR153W VTH2P40890 1549 aa12.51□□□□□ -0.41
NUP53YMR153W NUP159P40477 1460 aa12.51□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms