RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A ESF1Q06344 628 aaKnown RBP14.84□□□□□ -0.03
LSM3YLR438C-A PCL8Q08966 492 aa14.84□□□□□ -0.03
LSM3YLR438C-A KEL3Q08979 651 aaPredicted RBP14.84□□□□□ -0.03
LSM3YLR438C-A IMP2'P32351 346 aa14.83□□□□□ -0.04
LSM3YLR438C-A UTP7P40055 554 aaKnown RBP14.83□□□□□ -0.04
LSM3YLR438C-A YIR014WP40570 242 aa14.83□□□□□ -0.04
LSM3YLR438C-A SPN1Q06505 410 aaPredicted RBP14.83□□□□□ -0.04
LSM3YLR438C-A CRG1P38892 291 aaRIP-Chip data14.82□□□□□ -0.04not detected
LSM3YLR438C-A SPO22P40511 975 aa14.82□□□□□ -0.04
LSM3YLR438C-A UFD2P54860 961 aa14.82□□□□□ -0.04
LSM3YLR438C-A RPS15Q01855 142 aaKnown RBP14.82□□□□□ -0.04
LSM3YLR438C-A RNR2P09938 399 aaKnown RBP14.81□□□□□ -0.04
LSM3YLR438C-A NIT1P40447 199 aa14.81□□□□□ -0.04
LSM3YLR438C-A MSH4P40965 878 aaPredicted RBP14.81□□□□□ -0.04
LSM3YLR438C-A PGA3Q12746 312 aaKnown RBP14.81□□□□□ -0.04
LSM3YLR438C-A ADP1P25371 1049 aa14.8□□□□□ -0.04
LSM3YLR438C-A RLF2Q12495 606 aa14.8□□□□□ -0.04
LSM3YLR438C-A PMA1P05030 918 aaKnown RBP14.79□□□□□ -0.04
LSM3YLR438C-A CHO2P05374 869 aaKnown RBP14.79□□□□□ -0.04
LSM3YLR438C-A TRL1P09880 827 aaKnown RBP14.79□□□□□ -0.04
LSM3YLR438C-A PEP3P27801 918 aa14.79□□□□□ -0.04
LSM3YLR438C-A YBL028CP38202 106 aa14.79□□□□□ -0.04
LSM3YLR438C-A VHR2P40041 505 aa14.79□□□□□ -0.04
LSM3YLR438C-A RAD61Q99359 647 aa14.79□□□□□ -0.04
LSM3YLR438C-A RER2P35196 286 aa14.78□□□□□ -0.04
LSM3YLR438C-A PEA2P40091 420 aa14.78□□□□□ -0.04
LSM3YLR438C-A VID27P40157 782 aa14.78□□□□□ -0.04
LSM3YLR438C-A ARP5P53946 755 aa14.78□□□□□ -0.04
LSM3YLR438C-A CWC15Q03772 175 aaKnown RBP14.78□□□□□ -0.04
LSM3YLR438C-A GAL2P13181 574 aa14.77□□□□□ -0.05
LSM3YLR438C-A RAD53P22216 821 aa14.76□□□□□ -0.05
LSM3YLR438C-A YDL124WQ07551 312 aaKnown RBP14.76□□□□□ -0.05
LSM3YLR438C-A ANP1P32629 500 aa14.75□□□□□ -0.05
LSM3YLR438C-A TPS3P38426 1054 aaKnown RBP14.75□□□□□ -0.05
LSM3YLR438C-A YHL050CP38721 697 aa14.75□□□□□ -0.05
LSM3YLR438C-A VPS8P39702 1274 aa14.75□□□□□ -0.05
LSM3YLR438C-A AIM9P40053 627 aaKnown RBP14.75□□□□□ -0.05
LSM3YLR438C-A EST2Q06163 884 aa14.75□□□□□ -0.05
LSM3YLR438C-A SSA4P22202 642 aaKnown RBP14.74□□□□□ -0.05
LSM3YLR438C-A PRE8P23639 250 aa14.74□□□□□ -0.05
LSM3YLR438C-A SNU71P53207 620 aaKnown RBP14.74□□□□□ -0.05
LSM3YLR438C-A FLO1P32768 1537 aa14.74□□□□□ -0.05
LSM3YLR438C-A MPH3P0CE00 602 aa14.73□□□□□ -0.05
LSM3YLR438C-A KIN1P13185 1064 aa14.73□□□□□ -0.05
LSM3YLR438C-A KEL1P38853 1164 aaKnown RBP14.73□□□□□ -0.05
LSM3YLR438C-A RIT1P23796 513 aa14.72□□□□□ -0.05
LSM3YLR438C-A CST26P38226 397 aa14.72□□□□□ -0.05
LSM3YLR438C-A VID28P40547 921 aa14.72□□□□□ -0.05
LSM3YLR438C-A SRS2P12954 1174 aa14.71□□□□□ -0.05
LSM3YLR438C-A SRM1P21827 482 aa14.71□□□□□ -0.05
LSM3YLR438C-A MYO3P36006 1272 aa14.71□□□□□ -0.05
LSM3YLR438C-A ALG2P43636 503 aa14.7□□□□□ -0.06
LSM3YLR438C-A YKE2P52553 114 aa14.7□□□□□ -0.06
LSM3YLR438C-A CSR2Q12734 1121 aa14.7□□□□□ -0.06
LSM3YLR438C-A FBP26P32604 452 aa14.68□□□□□ -0.06
LSM3YLR438C-A SPT21P35209 758 aa14.68□□□□□ -0.06
LSM3YLR438C-A PCT1P13259 424 aa14.67□□□□□ -0.06
LSM3YLR438C-A YIL089WP40500 205 aa14.67□□□□□ -0.06
LSM3YLR438C-A RRT6P53117 311 aaPredicted RBP14.67□□□□□ -0.06
LSM3YLR438C-A TFC6Q06339 672 aa14.67□□□□□ -0.06
LSM3YLR438C-A LAP2Q10740 671 aa14.67□□□□□ -0.06
LSM3YLR438C-A TSR3Q12094 313 aaKnown RBP14.67□□□□□ -0.06
LSM3YLR438C-A ACE2P21192 770 aa14.66□□□□□ -0.06
LSM3YLR438C-A MAK31P23059 88 aa14.66□□□□□ -0.06
LSM3YLR438C-A PES4P39684 611 aa14.66□□□□□ -0.06
LSM3YLR438C-A HDA1P53973 706 aa14.66□□□□□ -0.06
LSM3YLR438C-A RPT6Q01939 405 aaKnown RBP14.66□□□□□ -0.06
LSM3YLR438C-A TUB2P02557 457 aaKnown RBP14.65□□□□□ -0.06
LSM3YLR438C-A RPL19AP0CX82 189 aaKnown RBP14.65□□□□□ -0.06
LSM3YLR438C-A RPL19BP0CX83 189 aaPredicted RBP14.65□□□□□ -0.06
LSM3YLR438C-A PFK2P16862 959 aaKnown RBP RIP-Chip data14.65□□□□□ -0.06not detected
LSM3YLR438C-A RPL8BP29453 256 aaKnown RBP14.65□□□□□ -0.06
LSM3YLR438C-A PRO3P32263 286 aaKnown RBP14.65□□□□□ -0.06
LSM3YLR438C-A PTK2P47116 818 aaKnown RBP14.65□□□□□ -0.06
LSM3YLR438C-A SKG3Q06315 1026 aa14.65□□□□□ -0.06
LSM3YLR438C-A PSK2Q08217 1101 aa14.65□□□□□ -0.06
LSM3YLR438C-A CLF1Q12309 687 aaPredicted RBP14.65□□□□□ -0.06
LSM3YLR438C-A MATALPHA2P0CY08 210 aa14.64□□□□□ -0.07
LSM3YLR438C-A HMLALPHA2P0CY09 210 aa14.64□□□□□ -0.07
LSM3YLR438C-A MAL31P38156 614 aa14.64□□□□□ -0.07
LSM3YLR438C-A PNT1P38969 423 aa14.64□□□□□ -0.07
LSM3YLR438C-A ACA1P39970 489 aa14.64□□□□□ -0.07
LSM3YLR438C-A VPS20Q04272 221 aa14.64□□□□□ -0.07
LSM3YLR438C-A GIN4Q12263 1142 aa14.64□□□□□ -0.07
LSM3YLR438C-A CHS3P29465 1165 aa14.63□□□□□ -0.07
LSM3YLR438C-A OPY1P38271 328 aa14.63□□□□□ -0.07
LSM3YLR438C-A YHL017WP38745 532 aa14.63□□□□□ -0.07
LSM3YLR438C-A FOL1P53848 824 aa14.63□□□□□ -0.07
LSM3YLR438C-A ERG12P07277 443 aa14.62□□□□□ -0.07
LSM3YLR438C-A ENT3P47160 408 aa14.62□□□□□ -0.07
LSM3YLR438C-A CTF18P49956 741 aa14.62□□□□□ -0.07
LSM3YLR438C-A MYO5Q04439 1219 aaKnown RBP14.62□□□□□ -0.07
LSM3YLR438C-A TYW1Q08960 810 aaKnown RBP14.62□□□□□ -0.07
LSM3YLR438C-A TTI1P36097 1038 aa14.61□□□□□ -0.07
LSM3YLR438C-A AKR1P39010 764 aa14.61□□□□□ -0.07
LSM3YLR438C-A BUD6P41697 788 aa14.61□□□□□ -0.07
LSM3YLR438C-A UBP10P53874 792 aaPredicted RBP14.61□□□□□ -0.07
LSM3YLR438C-A ECM23Q02710 187 aa14.61□□□□□ -0.07
LSM3YLR438C-A VPS30Q02948 557 aa14.61□□□□□ -0.07
LSM3YLR438C-A CSM2P40465 213 aa14.6□□□□□ -0.07
Retrieved 100 of 5,963 RNA–protein pairs in 95.1 ms