RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A SGS1P35187 1447 aa23.52■■□□□ 1.36
LSM3YLR438C-A INO80P53115 1489 aa23.48■■□□□ 1.35
LSM3YLR438C-A MON2P48563 1636 aaPredicted RBP23.34■■□□□ 1.33
LSM3YLR438C-A TCB3Q03640 1545 aaKnown RBP23.15■■□□□ 1.3
LSM3YLR438C-A TY1B-DR4Q07793 1604 aa22.81■■□□□ 1.24
LSM3YLR438C-A SWR1Q05471 1514 aa22.67■■□□□ 1.22
LSM3YLR438C-A DNA2P38859 1522 aa22.31■■□□□ 1.16
LSM3YLR438C-A SPT6P23615 1451 aaKnown RBP22.31■■□□□ 1.16
LSM3YLR438C-A HSL1P34244 1518 aa22.29■■□□□ 1.16
LSM3YLR438C-A SPA2P23201 1466 aaKnown RBP22.25■■□□□ 1.15
LSM3YLR438C-A KOG1P38873 1557 aa22.15■■□□□ 1.14
LSM3YLR438C-A SSN2P38931 1420 aa22.08■■□□□ 1.13
LSM3YLR438C-A HIR3P47171 1648 aa21.88■■□□□ 1.09
LSM3YLR438C-A XRN1P22147 1528 aaKnown RBP21.7■■□□□ 1.06
LSM3YLR438C-A DRS1P32892 752 aaKnown RBP21.59■■□□□ 1.05
LSM3YLR438C-A ECM5Q03214 1411 aa21.49■■□□□ 1.03
LSM3YLR438C-A BUD4P47136 1447 aa21.43■■□□□ 1.02
LSM3YLR438C-A THO2P53552 1597 aaKnown RBP21.38■■□□□ 1.01
LSM3YLR438C-A REV3P14284 1504 aa21.3■■□□□ 1
LSM3YLR438C-A TAF2P23255 1407 aa21.17■□□□□ 0.98
LSM3YLR438C-A RSE1Q04693 1361 aaKnown RBP21.13■□□□□ 0.97
LSM3YLR438C-A MDS3P53094 1487 aa21.07■□□□□ 0.96
LSM3YLR438C-A SIN3P22579 1536 aa21.06■□□□□ 0.96
LSM3YLR438C-A SKI3P17883 1432 aaKnown RBP20.96■□□□□ 0.95
LSM3YLR438C-A ATG2P53855 1592 aa20.96■□□□□ 0.95
LSM3YLR438C-A SSK2P53599 1579 aa20.93■□□□□ 0.94
LSM3YLR438C-A PEP1P32319 1579 aa20.91■□□□□ 0.94
LSM3YLR438C-A ESP1Q03018 1630 aa20.78■□□□□ 0.92
LSM3YLR438C-A MYO2P19524 1574 aaKnown RBP20.67■□□□□ 0.9
LSM3YLR438C-A MTC1P47018 478 aaKnown RBP20.62■□□□□ 0.89
LSM3YLR438C-A YPK9Q12697 1472 aa20.56■□□□□ 0.88
LSM3YLR438C-A BPT1P14772 1559 aa20.48■□□□□ 0.87
LSM3YLR438C-A UFD4P33202 1483 aa20.45■□□□□ 0.86
LSM3YLR438C-A SCC2Q04002 1493 aa20.43■□□□□ 0.86
LSM3YLR438C-A RPO31P04051 1460 aa20.34■□□□□ 0.85
LSM3YLR438C-A POL1P13382 1468 aa20.24■□□□□ 0.83
LSM3YLR438C-A RQC2Q12532 1038 aaKnown RBP20.18■□□□□ 0.82
LSM3YLR438C-A TOP2P06786 1428 aaKnown RBP20.17■□□□□ 0.82
LSM3YLR438C-A STU1P38198 1513 aa20.16■□□□□ 0.82
LSM3YLR438C-A YCF1P39109 1515 aaKnown RBP20.14■□□□□ 0.81
LSM3YLR438C-A RKR1Q04781 1562 aa20.13■□□□□ 0.81
LSM3YLR438C-A YOR1P53049 1477 aa20.01■□□□□ 0.79
LSM3YLR438C-A TY2B-LR1P0C2J3 1770 aa20■□□□□ 0.79
LSM3YLR438C-A TY2B-FP0CX63 1770 aa20■□□□□ 0.79
LSM3YLR438C-A TY2B-GR2P0CX64 1770 aa20■□□□□ 0.79
LSM3YLR438C-A TY2B-CP25384 1770 aa20■□□□□ 0.79
LSM3YLR438C-A TY2B-DR2Q03494 1770 aa20■□□□□ 0.79
LSM3YLR438C-A TY1B-DR1Q03855 1755 aa20■□□□□ 0.79
LSM3YLR438C-A TY2B-DR3Q07791 1770 aaKnown RBP20■□□□□ 0.79
LSM3YLR438C-A TY2B-OR1Q12113 1770 aa20■□□□□ 0.79
LSM3YLR438C-A TY2B-DR1Q12472 1770 aa20■□□□□ 0.79
LSM3YLR438C-A TY2B-OR2Q12501 1770 aa20■□□□□ 0.79
LSM3YLR438C-A CHD1P32657 1468 aa19.99■□□□□ 0.79
LSM3YLR438C-A SMC4Q12267 1418 aa19.98■□□□□ 0.79
LSM3YLR438C-A YTA7P40340 1379 aa19.96■□□□□ 0.79
LSM3YLR438C-A CDC25P04821 1589 aa19.92■□□□□ 0.78
LSM3YLR438C-A MMS22Q06164 1454 aa19.86■□□□□ 0.77
LSM3YLR438C-A PAN1P32521 1480 aa19.85■□□□□ 0.77
LSM3YLR438C-A TY1B-DR3Q99231 1755 aa19.8■□□□□ 0.76
LSM3YLR438C-A TY1B-BRQ12193 1756 aa19.8■□□□□ 0.76
LSM3YLR438C-A TY1B-GR3Q12316 1755 aa19.8■□□□□ 0.76
LSM3YLR438C-A TY1B-ORQ92393 1755 aa19.8■□□□□ 0.76
LSM3YLR438C-A TY2B-BQ12491 1770 aa19.79■□□□□ 0.76
LSM3YLR438C-A SPP41P38904 1435 aa19.76■□□□□ 0.75
LSM3YLR438C-A MYO4P32492 1471 aa19.73■□□□□ 0.75
LSM3YLR438C-A TY1B-HO13535 1793 aa19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-DR5P0C2I2 1755 aa19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-DR6P0C2I3 1755 aa19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-LR2P0C2I5 1755 aa19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-LR3P0C2I6 1755 aaKnown RBP19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-PR1P0C2I9 1755 aaKnown RBP19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-PR2P0C2J0 1756 aa19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-PR3P0C2J1 1755 aaKnown RBP19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-JR1P47098 1755 aa19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-ML2Q03434 1755 aaKnown RBP19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-ER1Q03612 1755 aa19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-ML1Q04711 1755 aaKnown RBP19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-GR2Q12269 1755 aa19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-OLQ12273 1755 aa19.7■□□□□ 0.74
LSM3YLR438C-A TY1B-PLQ12414 1755 aaKnown RBP19.7■□□□□ 0.74
LSM3YLR438C-A ESC1Q03661 1658 aaKnown RBP19.68■□□□□ 0.74
LSM3YLR438C-A TRM732Q03496 1420 aa19.67■□□□□ 0.74
LSM3YLR438C-A DNF1P32660 1571 aa19.66■□□□□ 0.74
LSM3YLR438C-A SAS10Q12136 610 aaPredicted RBP19.64■□□□□ 0.73
LSM3YLR438C-A TSC11P40061 1430 aa19.6■□□□□ 0.73
LSM3YLR438C-A MET5P47169 1442 aa19.54■□□□□ 0.72
LSM3YLR438C-A VTH1P40438 1549 aa19.53■□□□□ 0.72
LSM3YLR438C-A VTH2P40890 1549 aa19.53■□□□□ 0.72
LSM3YLR438C-A STH1P32597 1359 aa19.52■□□□□ 0.72
LSM3YLR438C-A RPA190P10964 1664 aaKnown RBP19.52■□□□□ 0.71
LSM3YLR438C-A TAF7Q05021 590 aa19.49■□□□□ 0.71
LSM3YLR438C-A SNQ2P32568 1501 aaKnown RBP19.43■□□□□ 0.7
LSM3YLR438C-A NUP159P40477 1460 aa19.37■□□□□ 0.69
LSM3YLR438C-A RTT106P40161 455 aa19.37■□□□□ 0.69
LSM3YLR438C-A TY1B-JR2P47100 1755 aaKnown RBP19.35■□□□□ 0.69
LSM3YLR438C-A TY1B-ER2Q03619 1755 aa19.35■□□□□ 0.69
LSM3YLR438C-A TY1B-MR1Q04214 1755 aa19.35■□□□□ 0.69
LSM3YLR438C-A TY1B-MR2Q04670 1755 aaKnown RBP19.35■□□□□ 0.69
LSM3YLR438C-A TY1B-LR1Q12088 1755 aaKnown RBP19.35■□□□□ 0.69
LSM3YLR438C-A TY1B-NL1Q12112 1755 aa19.35■□□□□ 0.69
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms