RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	CSE4	P36012	229 aa		4.44	□□□□□ -1.7
RPS13	YDR064W	OPY1	P38271	328 aa		4.44	□□□□□ -1.7
RPS13	YDR064W	UBP2	Q01476	1272 aa		4.44	□□□□□ -1.7
RPS13	YDR064W	ISU1	Q03020	165 aa		4.44	□□□□□ -1.7
RPS13	YDR064W	HEL2	Q05580	639 aa	Known RBP	4.44	□□□□□ -1.7
RPS13	YDR064W	ISR1	Q06098	443 aa	Known RBP	4.44	□□□□□ -1.7
RPS13	YDR064W	YPR172W	Q06608	200 aa		4.44	□□□□□ -1.7
RPS13	YDR064W	CCP1	P00431	361 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	VMA4	P22203	233 aa	Known RBP	4.43	□□□□□ -1.7
RPS13	YDR064W	PHO87	P25360	923 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	PWP2	P25635	923 aa	Known RBP	4.43	□□□□□ -1.7
RPS13	YDR064W	PSO2	P30620	661 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	PEX5	P35056	612 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	MUM2	P38236	366 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	OSH7	P38755	437 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	HAL5	P38970	855 aa	Known RBP	4.43	□□□□□ -1.7
RPS13	YDR064W	ROG3	P43602	733 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	APL6	P46682	809 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	BTN2	P53286	410 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	PAP2	P53632	584 aa	Known RBP	4.43	□□□□□ -1.7
RPS13	YDR064W	YNL108C	P53929	270 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	VTC3	Q02725	835 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	HPF1	Q05164	967 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	JIP5	Q06214	492 aa	Predicted RBP	4.43	□□□□□ -1.7
RPS13	YDR064W	YDL121C	Q07541	149 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	APC5	Q08683	685 aa		4.43	□□□□□ -1.7
RPS13	YDR064W	SGT2	Q12118	346 aa	Known RBP	4.43	□□□□□ -1.7
RPS13	YDR064W	RUD3	Q12234	484 aa	Known RBP	4.43	□□□□□ -1.7
RPS13	YDR064W	BRF1	P29056	596 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	STE5	P32917	917 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	MET10	P39692	1035 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	ERP2	P39704	215 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	BOI2	P39969	1040 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	SLX8	P40072	274 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	YTA6	P40328	754 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	KEL2	P50090	882 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	ITC1	P53125	1264 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	PXR1	P53335	271 aa	Predicted RBP	4.42	□□□□□ -1.7
RPS13	YDR064W	NAM8	Q00539	523 aa	Known RBP	4.42	□□□□□ -1.7
RPS13	YDR064W	RSC2	Q06488	889 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	UBX5	Q06682	500 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	CEX1	Q12453	761 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	BRR1	Q99177	341 aa	Predicted RBP	4.42	□□□□□ -1.7
RPS13	YDR064W	MYO4	P32492	1471 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	PAN1	P32521	1480 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	YPK9	Q12697	1472 aa		4.42	□□□□□ -1.7
RPS13	YDR064W	TOP2	P06786	1428 aa	Known RBP	4.41	□□□□□ -1.7
RPS13	YDR064W	CDC19	P00549	500 aa	Known RBP	4.41	□□□□□ -1.7
RPS13	YDR064W	ENO2	P00925	437 aa	Known RBP	4.41	□□□□□ -1.7
RPS13	YDR064W	CDC31	P06704	161 aa	Known RBP	4.41	□□□□□ -1.7
RPS13	YDR064W	GCD6	P32501	712 aa	Known RBP	4.41	□□□□□ -1.7
RPS13	YDR064W	EXO84	P38261	753 aa		4.41	□□□□□ -1.7
RPS13	YDR064W	TPS3	P38426	1054 aa	Known RBP	4.41	□□□□□ -1.7
RPS13	YDR064W	PET100	P38958	111 aa		4.41	□□□□□ -1.7
RPS13	YDR064W	FAF1	P40546	346 aa	Predicted RBP	4.41	□□□□□ -1.7
RPS13	YDR064W	BFA1	P47113	574 aa		4.41	□□□□□ -1.7
RPS13	YDR064W	YGR035C	P53222	116 aa		4.41	□□□□□ -1.7
RPS13	YDR064W	YAF9	P53930	226 aa		4.41	□□□□□ -1.7
RPS13	YDR064W	RNT1	Q02555	471 aa		4.41	□□□□□ -1.7
RPS13	YDR064W	TY1A-MR1	Q04215	440 aa		4.41	□□□□□ -1.7
RPS13	YDR064W	YRF1-1	P0CX20	1796 aa		4.4	□□□□□ -1.7
RPS13	YDR064W	YRF1-5	P0CX21	1796 aa		4.4	□□□□□ -1.7
RPS13	YDR064W	YRF1-8	P0CX22	1796 aa		4.4	□□□□□ -1.7
RPS13	YDR064W	TY1B-BR	Q12193	1756 aa		4.4	□□□□□ -1.7
RPS13	YDR064W	TY1B-GR3	Q12316	1755 aa		4.4	□□□□□ -1.7
RPS13	YDR064W	TY1B-OR	Q92393	1755 aa		4.4	□□□□□ -1.7
RPS13	YDR064W	SPT5	P27692	1063 aa	Known RBP	4.4	□□□□□ -1.71
RPS13	YDR064W	TOM20	P35180	183 aa		4.4	□□□□□ -1.71
RPS13	YDR064W	KDX1	P36005	433 aa		4.4	□□□□□ -1.71
RPS13	YDR064W	NDC80	P40460	691 aa		4.4	□□□□□ -1.71
RPS13	YDR064W	DSL1	P53847	754 aa		4.4	□□□□□ -1.71
RPS13	YDR064W	PSR1	Q07800	427 aa		4.4	□□□□□ -1.71
RPS13	YDR064W	NOC3	Q07896	663 aa	Predicted RBP	4.4	□□□□□ -1.71
RPS13	YDR064W	WTM2	Q12206	467 aa		4.4	□□□□□ -1.71
RPS13	YDR064W	VPS15	P22219	1454 aa		4.4	□□□□□ -1.71
RPS13	YDR064W	NTE1	Q04958	1679 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	SUP45	P12385	437 aa	Known RBP	4.39	□□□□□ -1.71
RPS13	YDR064W	SEC6	P32844	805 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	ARC19	P33204	171 aa	Known RBP	4.39	□□□□□ -1.71
RPS13	YDR064W	TIF3	P34167	436 aa	Known RBP	4.39	□□□□□ -1.71
RPS13	YDR064W	MED8	P38304	223 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	SOH1	P38633	127 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	LAM1	P38851	1228 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	TPM2	P40414	161 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	YJL007C	P47080	104 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	HGH1	P48362	394 aa	Known RBP	4.39	□□□□□ -1.71
RPS13	YDR064W	GYP7	P48365	746 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	PRP43	P53131	767 aa	Known RBP	4.39	□□□□□ -1.71
RPS13	YDR064W	CTF4	Q01454	927 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	RRP9	Q06506	573 aa	Known RBP	4.39	□□□□□ -1.71
RPS13	YDR064W	APC2	Q12440	853 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	ERP4	Q12450	207 aa		4.39	□□□□□ -1.71
RPS13	YDR064W	RAD3	P06839	778 aa		4.38	□□□□□ -1.71
RPS13	YDR064W	CLB1	P24868	471 aa		4.38	□□□□□ -1.71
RPS13	YDR064W	TRK2	P28584	889 aa		4.38	□□□□□ -1.71
RPS13	YDR064W	ETP1	P38748	585 aa	Known RBP	4.38	□□□□□ -1.71
RPS13	YDR064W	ECM1	P39715	212 aa		4.38	□□□□□ -1.71
RPS13	YDR064W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
RPS13	YDR064W	SHE4	P51534	789 aa		4.38	□□□□□ -1.71
RPS13	YDR064W	ELA1	P53861	379 aa	Predicted RBP	4.38	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms