RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Ipo9Q91YE6 1041 aa18.88■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Plekhg1F6S200 1446 aa18.87■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Map4k4P97820 1233 aaKnown RBP18.87■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Ralbp1Q62172 648 aa18.87■□□□□ 0.61
Rnf4-207ENSMUST00000182709 PzpQ61838 1495 aa18.86■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Gtf3c3Q3TMP1 882 aa18.86■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Pank1Q8K4K6 548 aa18.86■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Dbr1Q923B1 550 aa18.86■□□□□ 0.61
Rnf4-207ENSMUST00000182709 NktrP30415 1453 aa18.85■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Nrxn1Q9CS84 1514 aa18.85■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Zc3h13E9Q784 1729 aaKnown RBP18.84■□□□□ 0.61
Rnf4-207ENSMUST00000182709 CatipB9EKE5 520 aa18.84■□□□□ 0.61
Rnf4-207ENSMUST00000182709 B4galnt3Q6L8S8 986 aa18.84■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Adgrl1Q80TR1 1466 aa18.84■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Dip2aQ8BWT5 1523 aa18.84■□□□□ 0.61
Rnf4-207ENSMUST00000182709 PplQ9R269 1755 aa18.84■□□□□ 0.61
Rnf4-207ENSMUST00000182709 MpripP97434 1024 aa18.84■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Cabp4Q8VHC5 271 aa18.84■□□□□ 0.61
Rnf4-207ENSMUST00000182709 Plekhh1Q80TI1 1356 aa18.83■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Tspyl2Q7TQI8 677 aa18.82■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Gm21190A0A0G2JGJ6 266 aa18.82■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Hsp90aa1P07901 733 aaKnown RBP18.82■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Ap3b2Q9JME5 1082 aa18.82■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Gm6268A2A3U9 297 aa18.81■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Nckap5lQ6GQX2 1323 aa18.81■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Znf330Q922H9 316 aa18.81■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Armcx1Q9CX83 456 aa18.81■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Eif2ak4Q9QZ05 1648 aa18.8■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Pip4k2bQ80XI4 416 aa18.8■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Cabp2Q9JLK4 216 aa18.8■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Chd2E9PZM4 1827 aaKnown RBP18.79■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Slc35g1Q8BY79 368 aa18.79■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Ccdc9Q8VC31 543 aaKnown RBP18.79■□□□□ 0.6
Rnf4-207ENSMUST00000182709 KdrP35918 1367 aa18.78■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Dip2bQ3UH60 1574 aa18.78■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Nwd1A6H603 1563 aa18.78■□□□□ 0.6
Rnf4-207ENSMUST00000182709 1700019A02RikA0A087WPV9 146 aa18.77■□□□□ 0.6
Rnf4-207ENSMUST00000182709 Irx3P81067 507 aa18.77■□□□□ 0.6
Rnf4-207ENSMUST00000182709 U2surpQ6NV83 1029 aaKnown RBP18.76■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Uhrf1bp1lA2RSJ4 1457 aa18.76■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Pibf1E9Q6K3 756 aa18.75■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Trim28Q62318 834 aa18.75■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Plcd4Q8K3R3 807 aa18.75■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Cavin4A2AMM0 362 aa18.75■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Nectin2P32507 530 aa18.75■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Ppp1r3fQ9JIG4 799 aa18.74■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Evi5lH3BKQ3 813 aa18.74■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Pik3c2bE9QAN8 1632 aa18.74■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Ppp1r15aP17564 657 aa18.74■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Dennd6aQ8BH65 605 aa18.74■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Tmco5bQ80X59 307 aa18.73■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Nutm1Q8BHP2 1126 aa18.73■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Slit3Q9WVB4 1523 aa18.72■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Rbm25B2RY56 838 aaKnown RBP18.72■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Rsph6aQ8CDR2 708 aa18.72■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Eif4a2P10630 407 aa18.72■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Q4VA45 678 aa18.72■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Ccdc60Q8C4J0 545 aa18.72■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Prkrip1Q9CWV6 186 aaKnown RBP18.72■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Klhdc4Q921I2 584 aa18.71■□□□□ 0.59
Rnf4-207ENSMUST00000182709 Swt1Q9DBQ9 907 aa18.71■□□□□ 0.59
Rnf4-207ENSMUST00000182709 PtpruB1AUH1 1446 aa18.71■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Tmem132eQ6IEE6 982 aa18.7■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Ccar1Q8CH18 1146 aaKnown RBP18.7■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Irx6Q9ER75 438 aa18.7■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Usp32F8VPZ3 1604 aa18.69■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Gemin5Q8BX17 1502 aaKnown RBP18.69■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.67■□□□□ 0.58
Rnf4-207ENSMUST00000182709 4933416C03RikQ3V063 378 aa18.67■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Ddx17Q501J6 650 aaKnown RBP18.67■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Ccne1Q61457 408 aa18.67■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Nlgn1Q99K10 843 aa18.67■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Pik3r4Q8VD65 1358 aa18.67■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Snap23O09044 210 aa18.66■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Iqcf3Q9D498 203 aa18.66■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Frmpd2A0A140LI67 1392 aa18.66■□□□□ 0.58
Rnf4-207ENSMUST00000182709 TnikP83510 1323 aa18.65■□□□□ 0.58
Rnf4-207ENSMUST00000182709 ChgaP26339 463 aaKnown RBP18.65■□□□□ 0.58
Rnf4-207ENSMUST00000182709 GnpatP98192 678 aa18.65■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Stk31Q99MW1 1018 aa18.65■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Cps1Q8C196 1500 aa18.65■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Fgd1P52734 960 aa18.65■□□□□ 0.58
Rnf4-207ENSMUST00000182709 Iqsec2Q5DU25 1478 aa18.64■□□□□ 0.58
Rnf4-207ENSMUST00000182709 DaxxO35613 739 aa18.64■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Cluap1Q8R3P7 413 aa18.63■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Fyb1O35601 819 aa18.63■□□□□ 0.57
Rnf4-207ENSMUST00000182709 CastP51125 788 aa18.63■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Usp16Q99LG0 825 aa18.63■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Chd4Q6PDQ2 1915 aaKnown RBP18.63■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Rreb1Q3UH06 1700 aaKnown RBP18.63■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Fchsd2Q3USJ8 740 aa18.63■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Slain2Q8CI08 581 aa18.62■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Trim58Q5NCC9 485 aa18.62■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Cdc37l1Q9CZP7 335 aa18.62■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Ttll13A4Q9F6 804 aa18.61■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Ggnbp2Q5SV77 696 aa18.61■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Sirt1Q923E4 737 aa18.61■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Aplp1Q03157 653 aa18.6■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Chmp5Q9D7S9 219 aa18.6■□□□□ 0.57
Rnf4-207ENSMUST00000182709 G3bp1P97855 465 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms