Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Gm25239-201ENSMUST00000174915 86 ntBASIC56,72■■■■■ 6,67
Zc3h13E9Q784 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC53,06■■■■■ 6,08
Zc3h13E9Q784 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC51,87■■■■■ 5,89
Zc3h13E9Q784 Gm24109-201ENSMUST00000175489 103 ntBASIC49,79■■■■■ 5,56
Zc3h13E9Q784 Gm15042-201ENSMUST00000120212 883 ntBASIC48,79■■■■■ 5,4
Zc3h13E9Q784 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC48,01■■■■■ 5,28
Zc3h13E9Q784 Gm15045-201ENSMUST00000117359 883 ntBASIC47,9■■■■■ 5,26
Zc3h13E9Q784 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC47,82■■■■■ 5,25
Zc3h13E9Q784 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC47,81■■■■■ 5,24
Zc3h13E9Q784 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC47,45■■■■■ 5,19
Zc3h13E9Q784 Gm23366-201ENSMUST00000175022 89 ntBASIC47,18■■■■■ 5,14
Zc3h13E9Q784 AC153911.1-202ENSMUST00000218534 1034 ntBASIC46,68■■■■■ 5,06
Zc3h13E9Q784 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC46,29■■■■■ 5
Zc3h13E9Q784 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC46,23■■■■■ 4,99
Zc3h13E9Q784 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC46,12■■■■■ 4,97
Zc3h13E9Q784 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC46,1■■■■■ 4,97
Zc3h13E9Q784 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC45,83■■■■■ 4,93
Zc3h13E9Q784 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC45,34■■■■■ 4,85
Zc3h13E9Q784 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC45,33■■■■■ 4,85
Zc3h13E9Q784 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC45,18■■■■■ 4,82
Zc3h13E9Q784 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC45,16■■■■■ 4,82
Zc3h13E9Q784 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC45,09■■■■■ 4,81
Zc3h13E9Q784 Gm25238-201ENSMUST00000174914 89 ntBASIC45,07■■■■■ 4,81
Zc3h13E9Q784 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC44,85■■■■■ 4,77
Zc3h13E9Q784 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC44,34■■■■■ 4,69
Zc3h13E9Q784 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC44,32■■■■■ 4,69
Zc3h13E9Q784 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC44,26■■■■■ 4,68
Zc3h13E9Q784 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC44,19■■■■■ 4,66
Zc3h13E9Q784 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC44,08■■■■■ 4,65
Zc3h13E9Q784 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC44,01■■■■■ 4,64
Zc3h13E9Q784 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC43,96■■■■■ 4,63
Zc3h13E9Q784 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC43,89■■■■■ 4,62
Zc3h13E9Q784 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC43,76■■■■■ 4,6
Zc3h13E9Q784 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC43,69■■■■■ 4,58
Zc3h13E9Q784 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC43,56■■■■■ 4,56
Zc3h13E9Q784 Gm25262-201ENSMUST00000174934 133 ntBASIC43,56■■■■■ 4,56
Zc3h13E9Q784 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC43,51■■■■■ 4,56
Zc3h13E9Q784 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC43,46■■■■■ 4,55
Zc3h13E9Q784 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC43,31■■■■■ 4,52
Zc3h13E9Q784 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC43,2■■■■■ 4,51
Zc3h13E9Q784 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC43,13■■■■■ 4,49
Zc3h13E9Q784 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC43,08■■■■■ 4,49
Zc3h13E9Q784 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC42,94■■■■■ 4,47
Zc3h13E9Q784 Gm26115-201ENSMUST00000175605 87 ntBASIC42,94■■■■■ 4,46
Zc3h13E9Q784 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC42,87■■■■■ 4,45
Zc3h13E9Q784 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC42,79■■■■■ 4,44
Zc3h13E9Q784 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC42,76■■■■■ 4,44
Zc3h13E9Q784 Gm8109-201ENSMUST00000194076 746 ntBASIC42,71■■■■■ 4,43
Zc3h13E9Q784 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC42,65■■■■■ 4,42
Zc3h13E9Q784 Gm27325-201ENSMUST00000175467 74 ntBASIC42,65■■■■■ 4,42
Zc3h13E9Q784 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC42,63■■■■■ 4,42
Zc3h13E9Q784 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC42,55■■■■■ 4,4
Zc3h13E9Q784 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC42,53■■■■■ 4,4
Zc3h13E9Q784 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC42,39■■■■■ 4,38
Zc3h13E9Q784 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC42,36■■■■■ 4,37
Zc3h13E9Q784 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC42,3■■■■■ 4,36
Zc3h13E9Q784 Rab21-202ENSMUST00000218831 843 ntBASIC42,28■■■■■ 4,36
Zc3h13E9Q784 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC42,23■■■■■ 4,35
Zc3h13E9Q784 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC42,1■■■■■ 4,33
Zc3h13E9Q784 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC42,03■■■■■ 4,32
Zc3h13E9Q784 Psd-208ENSMUST00000224556 2034 ntBASIC41,89■■■■■ 4,3
Zc3h13E9Q784 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC41,89■■■■■ 4,3
Zc3h13E9Q784 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC41,86■■■■■ 4,29
Zc3h13E9Q784 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC41,74■■■■■ 4,27
Zc3h13E9Q784 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC41,72■■■■■ 4,27
Zc3h13E9Q784 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC41,7■■■■■ 4,27
Zc3h13E9Q784 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC41,63■■■■■ 4,25
Zc3h13E9Q784 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC41,58■■■■■ 4,25
Zc3h13E9Q784 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC41,48■■■■■ 4,23
Zc3h13E9Q784 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC41,41■■■■■ 4,22
Zc3h13E9Q784 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC41,37■■■■■ 4,21
Zc3h13E9Q784 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC41,3■■■■■ 4,2
Zc3h13E9Q784 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC41,29■■■■■ 4,2
Zc3h13E9Q784 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC41,2■■■■■ 4,19
Zc3h13E9Q784 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC41,19■■■■■ 4,18
Zc3h13E9Q784 Gm17082-201ENSMUST00000166043 1091 ntBASIC41,18■■■■■ 4,18
Zc3h13E9Q784 Gm24804-201ENSMUST00000174982 85 ntBASIC41,16■■■■■ 4,18
Zc3h13E9Q784 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC41,15■■■■■ 4,18
Zc3h13E9Q784 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC41,15■■■■■ 4,18
Zc3h13E9Q784 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC41,13■■■■■ 4,18
Zc3h13E9Q784 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC41,01■■■■■ 4,16
Zc3h13E9Q784 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC40,99■■■■■ 4,15
Zc3h13E9Q784 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC40,99■■■■■ 4,15
Zc3h13E9Q784 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC40,9■■■■■ 4,14
Zc3h13E9Q784 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC40,83■■■■■ 4,13
Zc3h13E9Q784 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC40,79■■■■■ 4,12
Zc3h13E9Q784 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC40,77■■■■■ 4,12
Zc3h13E9Q784 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC40,73■■■■■ 4,11
Zc3h13E9Q784 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC40,68■■■■■ 4,1
Zc3h13E9Q784 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC40,66■■■■■ 4,1
Zc3h13E9Q784 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC40,64■■■■■ 4,1
Zc3h13E9Q784 Zfp131-205ENSMUST00000223812 663 ntBASIC40,62■■■■■ 4,09
Zc3h13E9Q784 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC40,6■■■■■ 4,09
Zc3h13E9Q784 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC40,53■■■■■ 4,08
Zc3h13E9Q784 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC40,53■■■■■ 4,08
Zc3h13E9Q784 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC40,53■■■■■ 4,08
Zc3h13E9Q784 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC40,52■■■■■ 4,08
Zc3h13E9Q784 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC40,46■■■■■ 4,07
Zc3h13E9Q784 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC40,45■■■■■ 4,07
Zc3h13E9Q784 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC40,43■■■■■ 4,06
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms