Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm25239-201ENSMUST00000174915 86 ntBASIC55.16■■■■■ 6.42
Cps1Q8C196 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC51.25■■■■■ 5.79
Cps1Q8C196 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC50.21■■■■■ 5.63
Cps1Q8C196 Gm24109-201ENSMUST00000175489 103 ntBASIC48.13■■■■■ 5.3
Cps1Q8C196 Gm15042-201ENSMUST00000120212 883 ntBASIC47.92■■■■■ 5.26
Cps1Q8C196 Gm15045-201ENSMUST00000117359 883 ntBASIC46.97■■■■■ 5.11
Cps1Q8C196 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC46.62■■■■■ 5.05
Cps1Q8C196 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC46.44■■■■■ 5.02
Cps1Q8C196 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC46.18■■■■■ 4.98
Cps1Q8C196 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC46■■■■■ 4.95
Cps1Q8C196 Gm23366-201ENSMUST00000175022 89 ntBASIC45.96■■■■■ 4.95
Cps1Q8C196 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC45.19■■■■■ 4.82
Cps1Q8C196 AC153911.1-202ENSMUST00000218534 1034 ntBASIC44.81■■■■■ 4.76
Cps1Q8C196 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC44.57■■■■■ 4.73
Cps1Q8C196 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC44.57■■■■■ 4.73
Cps1Q8C196 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC44.49■■■■■ 4.71
Cps1Q8C196 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC44.34■■■■■ 4.69
Cps1Q8C196 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC44.33■■■■■ 4.69
Cps1Q8C196 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC44.06■■■■■ 4.64
Cps1Q8C196 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC43.83■■■■■ 4.61
Cps1Q8C196 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC43.82■■■■■ 4.61
Cps1Q8C196 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC43.74■■■■■ 4.59
Cps1Q8C196 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC43.69■■■■■ 4.58
Cps1Q8C196 Gm25238-201ENSMUST00000174914 89 ntBASIC43.62■■■■■ 4.57
Cps1Q8C196 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC43.61■■■■■ 4.57
Cps1Q8C196 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC43.59■■■■■ 4.57
Cps1Q8C196 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC43.35■■■■■ 4.53
Cps1Q8C196 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC43.28■■■■■ 4.52
Cps1Q8C196 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC43.2■■■■■ 4.51
Cps1Q8C196 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC43.05■■■■■ 4.48
Cps1Q8C196 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC42.93■■■■■ 4.46
Cps1Q8C196 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC42.9■■■■■ 4.46
Cps1Q8C196 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC42.88■■■■■ 4.46
Cps1Q8C196 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC42.72■■■■■ 4.43
Cps1Q8C196 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC42.6■■■■■ 4.41
Cps1Q8C196 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC42.35■■■■■ 4.37
Cps1Q8C196 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC42.34■■■■■ 4.37
Cps1Q8C196 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC42.26■■■■■ 4.36
Cps1Q8C196 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC42.22■■■■■ 4.35
Cps1Q8C196 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC42.02■■■■■ 4.32
Cps1Q8C196 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC41.91■■■■■ 4.3
Cps1Q8C196 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC41.89■■■■■ 4.3
Cps1Q8C196 Gm27325-201ENSMUST00000175467 74 ntBASIC41.89■■■■■ 4.3
Cps1Q8C196 Gm25262-201ENSMUST00000174934 133 ntBASIC41.82■■■■■ 4.29
Cps1Q8C196 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC41.74■■■■■ 4.27
Cps1Q8C196 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC41.63■■■■■ 4.25
Cps1Q8C196 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC41.57■■■■■ 4.25
Cps1Q8C196 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC41.53■■■■■ 4.24
Cps1Q8C196 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC41.39■■■■■ 4.22
Cps1Q8C196 Rab21-202ENSMUST00000218831 843 ntBASIC41.36■■■■■ 4.21
Cps1Q8C196 Psd-208ENSMUST00000224556 2034 ntBASIC41.32■■■■■ 4.21
Cps1Q8C196 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC41.23■■■■■ 4.19
Cps1Q8C196 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC41.22■■■■■ 4.19
Cps1Q8C196 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC41.21■■■■■ 4.19
Cps1Q8C196 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
Cps1Q8C196 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40.98■■■■■ 4.15
Cps1Q8C196 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC40.97■■■■■ 4.15
Cps1Q8C196 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC40.97■■■■■ 4.15
Cps1Q8C196 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC40.94■■■■■ 4.14
Cps1Q8C196 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC40.94■■■■■ 4.14
Cps1Q8C196 Gm26115-201ENSMUST00000175605 87 ntBASIC40.93■■■■■ 4.14
Cps1Q8C196 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC40.89■■■■■ 4.14
Cps1Q8C196 Gm8109-201ENSMUST00000194076 746 ntBASIC40.8■■■■■ 4.12
Cps1Q8C196 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
Cps1Q8C196 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC40.67■■■■■ 4.1
Cps1Q8C196 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC40.66■■■■■ 4.1
Cps1Q8C196 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC40.64■■■■■ 4.1
Cps1Q8C196 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC40.57■■■■■ 4.09
Cps1Q8C196 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
Cps1Q8C196 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC40.55■■■■■ 4.08
Cps1Q8C196 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
Cps1Q8C196 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC40.48■■■■■ 4.07
Cps1Q8C196 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC40.42■■■■■ 4.06
Cps1Q8C196 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
Cps1Q8C196 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC40.38■■■■■ 4.06
Cps1Q8C196 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC40.31■■■■■ 4.04
Cps1Q8C196 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
Cps1Q8C196 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC40.22■■■■■ 4.03
Cps1Q8C196 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC40.19■■■■■ 4.02
Cps1Q8C196 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC40.13■■■■■ 4.01
Cps1Q8C196 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC40.12■■■■■ 4.01
Cps1Q8C196 Gm17082-201ENSMUST00000166043 1091 ntBASIC40.09■■■■■ 4.01
Cps1Q8C196 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC40.07■■■■■ 4
Cps1Q8C196 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC40.04■■■■■ 4
Cps1Q8C196 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC39.94■■■■□ 3.98
Cps1Q8C196 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
Cps1Q8C196 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
Cps1Q8C196 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.98
Cps1Q8C196 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC39.87■■■■□ 3.97
Cps1Q8C196 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC39.79■■■■□ 3.96
Cps1Q8C196 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC39.77■■■■□ 3.96
Cps1Q8C196 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC39.76■■■■□ 3.96
Cps1Q8C196 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC39.67■■■■□ 3.94
Cps1Q8C196 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC39.63■■■■□ 3.93
Cps1Q8C196 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
Cps1Q8C196 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC39.58■■■■□ 3.93
Cps1Q8C196 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
Cps1Q8C196 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
Cps1Q8C196 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Cps1Q8C196 Gm24804-201ENSMUST00000174982 85 ntBASIC39.46■■■■□ 3.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms