RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	RRB1	Q04225	511 aa	Known RBP	4.92	□□□□□ -1.62
UPC2	YDR213W	PEX19	Q07418	342 aa		4.92	□□□□□ -1.62
UPC2	YDR213W	RRP43	P25359	394 aa	Predicted RBP	4.92	□□□□□ -1.62
UPC2	YDR213W	SCT1	P32784	759 aa		4.92	□□□□□ -1.62
UPC2	YDR213W	BDP1	P46678	594 aa		4.92	□□□□□ -1.62
UPC2	YDR213W	YJL007C	P47080	104 aa		4.92	□□□□□ -1.62
UPC2	YDR213W	CTH1	P47976	325 aa		4.92	□□□□□ -1.62
UPC2	YDR213W	RCM1	P53972	490 aa		4.92	□□□□□ -1.62
UPC2	YDR213W	GAS4	Q08271	471 aa		4.92	□□□□□ -1.62
UPC2	YDR213W	TIF1	P10081	395 aa	Known RBP	4.91	□□□□□ -1.62
UPC2	YDR213W	ATE1	P16639	503 aa		4.91	□□□□□ -1.62
UPC2	YDR213W	YGL015C	P33199	130 aa		4.91	□□□□□ -1.62
UPC2	YDR213W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
UPC2	YDR213W	FYV10	P40492	516 aa		4.91	□□□□□ -1.62
UPC2	YDR213W	ALD4	P46367	519 aa	Known RBP	4.91	□□□□□ -1.62
UPC2	YDR213W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
UPC2	YDR213W	ETT1	Q08421	412 aa	Known RBP	4.91	□□□□□ -1.62
UPC2	YDR213W	TYW1	Q08960	810 aa	Known RBP	4.91	□□□□□ -1.62
UPC2	YDR213W	PCH2	P38126	564 aa		4.91	□□□□□ -1.62
UPC2	YDR213W	NPR3	P38742	1146 aa		4.91	□□□□□ -1.62
UPC2	YDR213W	CCT5	P40413	562 aa	Known RBP	4.91	□□□□□ -1.62
UPC2	YDR213W	BIO2	P32451	375 aa		4.9	□□□□□ -1.62
UPC2	YDR213W	MRS2	Q01926	470 aa		4.9	□□□□□ -1.62
UPC2	YDR213W	SRT1	Q03175	343 aa		4.9	□□□□□ -1.62
UPC2	YDR213W	PET123	P17558	318 aa		4.9	□□□□□ -1.63
UPC2	YDR213W	SWC3	P31376	625 aa		4.9	□□□□□ -1.63
UPC2	YDR213W	SAP190	P36123	1033 aa		4.9	□□□□□ -1.63
UPC2	YDR213W	SWH1	P35845	1188 aa		4.89	□□□□□ -1.63
UPC2	YDR213W	NOC2	P39744	710 aa	Known RBP	4.89	□□□□□ -1.63
UPC2	YDR213W	CSN12	P47130	423 aa		4.89	□□□□□ -1.63
UPC2	YDR213W	YOL087C	Q99247	1116 aa		4.89	□□□□□ -1.63
UPC2	YDR213W	PPH3	P32345	308 aa		4.89	□□□□□ -1.63
UPC2	YDR213W	PRX1	P34227	261 aa	Known RBP	4.89	□□□□□ -1.63
UPC2	YDR213W	YNL011C	P53980	444 aa		4.89	□□□□□ -1.63
UPC2	YDR213W	GIN4	Q12263	1142 aa		4.89	□□□□□ -1.63
UPC2	YDR213W	POM152	P39685	1337 aa		4.89	□□□□□ -1.63
UPC2	YDR213W	RPL19A	P0CX82	189 aa	Known RBP	4.88	□□□□□ -1.63
UPC2	YDR213W	RPL19B	P0CX83	189 aa	Predicted RBP	4.88	□□□□□ -1.63
UPC2	YDR213W	MPE1	P35728	441 aa	Known RBP	4.88	□□□□□ -1.63
UPC2	YDR213W	TTI1	P36097	1038 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	PDI1	P17967	522 aa	Known RBP	4.88	□□□□□ -1.63
UPC2	YDR213W	MRC1	P25588	1096 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	MSH1	P25846	959 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	CPS1	P27614	576 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	RGD1	P38339	666 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	YER130C	P39959	443 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	CTF18	P49956	741 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	DSD1	P53095	428 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	YML083C	Q04526	418 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	PIB1	Q06651	286 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	YPL225W	Q08971	146 aa	Known RBP	4.88	□□□□□ -1.63
UPC2	YDR213W	RFC5	P38251	354 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	VID28	P40547	921 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	SEN54	Q02825	467 aa	Predicted RBP	4.88	□□□□□ -1.63
UPC2	YDR213W	RBA50	Q04418	439 aa		4.88	□□□□□ -1.63
UPC2	YDR213W	LYS2	P07702	1392 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	SIR4	P11978	1358 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	CDC15	P27636	974 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	ORC6	P38826	435 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	GYP7	P48365	746 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	GRX3	Q03835	250 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	COG4	Q06096	861 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	SDH5	Q08230	162 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	APL4	Q12028	832 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	AUS1	Q08409	1394 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	TOP1	P04786	769 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	GPA1	P08539	472 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	RDS1	P25611	832 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	HSP104	P31539	908 aa	Known RBP	4.87	□□□□□ -1.63
UPC2	YDR213W	REI1	P38344	393 aa	Predicted RBP	4.87	□□□□□ -1.63
UPC2	YDR213W	HYR1	P40581	163 aa	Known RBP	4.87	□□□□□ -1.63
UPC2	YDR213W	WAR1	Q03631	944 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	YOR238W	Q08634	303 aa		4.87	□□□□□ -1.63
UPC2	YDR213W	RAD24	P32641	659 aa		4.86	□□□□□ -1.63
UPC2	YDR213W	PEX14	P53112	341 aa		4.86	□□□□□ -1.63
UPC2	YDR213W	NNF2	P53253	936 aa		4.86	□□□□□ -1.63
UPC2	YDR213W	PUS1	Q12211	544 aa	Known RBP	4.86	□□□□□ -1.63
UPC2	YDR213W	ZDS1	P50111	915 aa	Known RBP	4.86	□□□□□ -1.63
UPC2	YDR213W	CPA2	P03965	1118 aa	Known RBP	4.85	□□□□□ -1.63
UPC2	YDR213W	UBP1	P25037	809 aa		4.85	□□□□□ -1.63
UPC2	YDR213W	SPT5	P27692	1063 aa	Known RBP	4.85	□□□□□ -1.63
UPC2	YDR213W	PUP2	P32379	260 aa		4.85	□□□□□ -1.63
UPC2	YDR213W	AKL1	P38080	1108 aa	Known RBP	4.85	□□□□□ -1.63
UPC2	YDR213W	AOS1	Q06624	347 aa		4.85	□□□□□ -1.63
UPC2	YDR213W	DUR1,2	P32528	1835 aa	Known RBP	4.85	□□□□□ -1.63
UPC2	YDR213W	VMA1	P17255	1071 aa	Known RBP	4.85	□□□□□ -1.63
UPC2	YDR213W	CDC60	P26637	1090 aa	Known RBP	4.85	□□□□□ -1.63
UPC2	YDR213W	ECM32	P32644	1121 aa	Known RBP	4.85	□□□□□ -1.63
UPC2	YDR213W	BRL1	P38770	471 aa		4.85	□□□□□ -1.63
UPC2	YDR213W	YGR273C	P53329	174 aa		4.85	□□□□□ -1.63
UPC2	YDR213W	RIA1	P53893	1110 aa		4.85	□□□□□ -1.63
UPC2	YDR213W	BYE1	P36106	594 aa		4.84	□□□□□ -1.63
UPC2	YDR213W	RRM3	P38766	723 aa		4.84	□□□□□ -1.63
UPC2	YDR213W	YGL242C	P53066	181 aa		4.84	□□□□□ -1.63
UPC2	YDR213W	SFH1	Q06168	426 aa		4.84	□□□□□ -1.63
UPC2	YDR213W	JIP3	O13555	125 aa		4.84	□□□□□ -1.63
UPC2	YDR213W	CDC16	P09798	840 aa		4.84	□□□□□ -1.63
UPC2	YDR213W	RGR1	P19263	1082 aa		4.84	□□□□□ -1.63
UPC2	YDR213W	BUD31	P25337	157 aa	Predicted RBP	4.84	□□□□□ -1.63
UPC2	YDR213W	SRP40	P32583	406 aa	Predicted RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms