RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 BBC1P47068 1157 aa11.92□□□□□ -0.5
RDN18-1RDN18-1 PKH3Q03306 898 aaPredicted RBP11.92□□□□□ -0.5
RDN18-1RDN18-1 LCD1Q04377 747 aa11.92□□□□□ -0.5
RDN18-1RDN18-1 CPA2P03965 1118 aaKnown RBP11.91□□□□□ -0.5
RDN18-1RDN18-1 DID4P36108 232 aa11.91□□□□□ -0.5
RDN18-1RDN18-1 OPI1P21957 404 aa11.9□□□□□ -0.5
RDN18-1RDN18-1 AIM44Q99299 758 aa11.9□□□□□ -0.5
RDN18-1RDN18-1 POM152P39685 1337 aa11.9□□□□□ -0.5
RDN18-1RDN18-1 TPM1P17536 199 aaKnown RBP11.9□□□□□ -0.5
RDN18-1RDN18-1 NGR1P32831 672 aaKnown RBP11.9□□□□□ -0.5
RDN18-1RDN18-1 ARP5P53946 755 aa11.9□□□□□ -0.5
RDN18-1RDN18-1 FRS2P15625 503 aaKnown RBP11.89□□□□□ -0.51
RDN18-1RDN18-1 GLO3P38682 493 aaKnown RBP11.89□□□□□ -0.51
RDN18-1RDN18-1 RSM25P40496 264 aa11.89□□□□□ -0.51
RDN18-1RDN18-1 RRI2Q12348 645 aa11.89□□□□□ -0.51
RDN18-1RDN18-1 PIL1P53252 339 aaKnown RBP11.88□□□□□ -0.51
RDN18-1RDN18-1 CTI6Q08923 506 aa11.88□□□□□ -0.51
RDN18-1RDN18-1 FAS2P19097 1887 aaKnown RBP11.88□□□□□ -0.51
RDN18-1RDN18-1 IMP2'P32351 346 aa11.88□□□□□ -0.51
RDN18-1RDN18-1 YPL150WQ12152 901 aa11.88□□□□□ -0.51
RDN18-1RDN18-1 PEP3P27801 918 aa11.87□□□□□ -0.51
RDN18-1RDN18-1 PEX14P53112 341 aa11.87□□□□□ -0.51
RDN18-1RDN18-1 ECM23Q02710 187 aa11.87□□□□□ -0.51
RDN18-1RDN18-1 ELG1Q12050 791 aa11.87□□□□□ -0.51
RDN18-1RDN18-1 FBP26P32604 452 aa11.86□□□□□ -0.51
RDN18-1RDN18-1 ELM1P32801 640 aa11.86□□□□□ -0.51
RDN18-1RDN18-1 CCT5P40413 562 aaKnown RBP11.86□□□□□ -0.51
RDN18-1RDN18-1 THI3Q07471 609 aa11.86□□□□□ -0.51
RDN18-1RDN18-1 RDS1P25611 832 aa11.86□□□□□ -0.51
RDN18-1RDN18-1 TTI1P36097 1038 aa11.86□□□□□ -0.51
RDN18-1RDN18-1 KAR5Q04746 504 aa11.86□□□□□ -0.51
RDN18-1RDN18-1 MATALPHA2P0CY08 210 aa11.85□□□□□ -0.51
RDN18-1RDN18-1 HMLALPHA2P0CY09 210 aa11.85□□□□□ -0.51
RDN18-1RDN18-1 LYS4P49367 693 aaPredicted RBP11.85□□□□□ -0.51
RDN18-1RDN18-1 RAT1Q02792 1006 aaKnown RBP11.85□□□□□ -0.51
RDN18-1RDN18-1 PMD1P32634 1753 aa11.84□□□□□ -0.51
RDN18-1RDN18-1 MGM1P32266 881 aa11.84□□□□□ -0.51
RDN18-1RDN18-1 MCM2P29469 868 aa11.83□□□□□ -0.51
RDN18-1RDN18-1 MAL33P38157 468 aa11.83□□□□□ -0.51
RDN18-1RDN18-1 YHL017WP38745 532 aa11.83□□□□□ -0.51
RDN18-1RDN18-1 ESF1Q06344 628 aaKnown RBP11.83□□□□□ -0.51
RDN18-1RDN18-1 PSK2Q08217 1101 aa11.83□□□□□ -0.51
RDN18-1RDN18-1 BUG1Q12191 341 aa11.83□□□□□ -0.51
RDN18-1RDN18-1 PIF1P07271 859 aa11.83□□□□□ -0.52
RDN18-1RDN18-1 YIR042CP40586 236 aa11.83□□□□□ -0.52
RDN18-1RDN18-1 YKE2P52553 114 aa11.83□□□□□ -0.52
RDN18-1RDN18-1 CTR9P89105 1077 aa11.83□□□□□ -0.52
RDN18-1RDN18-1 SSL2Q00578 843 aa11.83□□□□□ -0.52
RDN18-1RDN18-1 YMR074CQ04773 145 aa11.83□□□□□ -0.52
RDN18-1RDN18-1 YLR407WQ06070 228 aa11.83□□□□□ -0.52
RDN18-1RDN18-1 TAH18Q12181 623 aa11.83□□□□□ -0.52
RDN18-1RDN18-1 SKI2P35207 1287 aaKnown RBP RIP-Chip data11.82□□□□□ -0.52not detected
RDN18-1RDN18-1 SRC1Q03707 834 aa11.82□□□□□ -0.52
RDN18-1RDN18-1 PPM2Q08282 695 aa11.82□□□□□ -0.52
RDN18-1RDN18-1 TRS33Q99394 268 aa11.82□□□□□ -0.52
RDN18-1RDN18-1 MET1P36150 593 aa11.81□□□□□ -0.52
RDN18-1RDN18-1 GRX7P38068 203 aa11.81□□□□□ -0.52
RDN18-1RDN18-1 RIX7Q07844 837 aaKnown RBP11.81□□□□□ -0.52
RDN18-1RDN18-1 RFC5P38251 354 aa11.81□□□□□ -0.52
RDN18-1RDN18-1 NPR3P38742 1146 aa11.81□□□□□ -0.52
RDN18-1RDN18-1 ICP55P40051 511 aa11.81□□□□□ -0.52
RDN18-1RDN18-1 EPL1P43572 832 aa11.81□□□□□ -0.52
RDN18-1RDN18-1 INM2Q05533 292 aa11.8□□□□□ -0.52
RDN18-1RDN18-1 SSF2Q12153 453 aaPredicted RBP11.8□□□□□ -0.52
RDN18-1RDN18-1 DPH6Q12429 685 aa11.8□□□□□ -0.52
RDN18-1RDN18-1 SPL2P38839 148 aa11.79□□□□□ -0.52
RDN18-1RDN18-1 COQ1P18900 473 aa11.79□□□□□ -0.52
RDN18-1RDN18-1 IRC8P47046 822 aa11.79□□□□□ -0.52
RDN18-1RDN18-1 ALD3P54114 506 aa11.79□□□□□ -0.52
RDN18-1RDN18-1 DDP1Q99321 188 aaKnown RBP11.79□□□□□ -0.52
RDN18-1RDN18-1 FIG2P25653 1609 aa11.78□□□□□ -0.52
RDN18-1RDN18-1 CHO2P05374 869 aaKnown RBP11.78□□□□□ -0.52
RDN18-1RDN18-1 CAF20P12962 161 aaKnown RBP11.78□□□□□ -0.52
RDN18-1RDN18-1 BUD6P41697 788 aa11.78□□□□□ -0.52
RDN18-1RDN18-1 CTH1P47976 325 aa11.78□□□□□ -0.52
RDN18-1RDN18-1 UTP22P53254 1237 aaPredicted RBP11.78□□□□□ -0.52
RDN18-1RDN18-1 SYF1Q04048 859 aaPredicted RBP11.78□□□□□ -0.52
RDN18-1RDN18-1 RER2P35196 286 aa11.77□□□□□ -0.52
RDN18-1RDN18-1 MIC60P36112 540 aa11.77□□□□□ -0.52
RDN18-1RDN18-1 MRPL10P36520 322 aa11.77□□□□□ -0.52
RDN18-1RDN18-1 CRG1P38892 291 aaRIP-Chip data11.77□□□□□ -0.52not detected
RDN18-1RDN18-1 SPN1Q06505 410 aaPredicted RBP11.77□□□□□ -0.52
RDN18-1RDN18-1 BDF2Q07442 638 aa11.77□□□□□ -0.52
RDN18-1RDN18-1 BUD31P25337 157 aaPredicted RBP11.76□□□□□ -0.53
RDN18-1RDN18-1 RPG1P38249 964 aaKnown RBP11.76□□□□□ -0.53
RDN18-1RDN18-1 GPA1P08539 472 aa11.76□□□□□ -0.53
RDN18-1RDN18-1 BDF1P35817 686 aa11.76□□□□□ -0.53
RDN18-1RDN18-1 NUG1P40010 520 aaKnown RBP11.76□□□□□ -0.53
RDN18-1RDN18-1 ENP2P48234 707 aaKnown RBP11.76□□□□□ -0.53
RDN18-1RDN18-1 HDA1P53973 706 aa11.76□□□□□ -0.53
RDN18-1RDN18-1 DIB1Q06819 143 aaPredicted RBP11.76□□□□□ -0.53
RDN18-1RDN18-1 ATE1P16639 503 aa11.75□□□□□ -0.53
RDN18-1RDN18-1 RPT3P33298 428 aaKnown RBP11.75□□□□□ -0.53
RDN18-1RDN18-1 RPT4P53549 437 aaKnown RBP11.75□□□□□ -0.53
RDN18-1RDN18-1 SGD1Q06132 899 aa11.75□□□□□ -0.53
RDN18-1RDN18-1 FRD1P32614 470 aaKnown RBP11.74□□□□□ -0.53
RDN18-1RDN18-1 TOS1P38288 455 aa11.74□□□□□ -0.53
RDN18-1RDN18-1 YER130CP39959 443 aa11.74□□□□□ -0.53
RDN18-1RDN18-1 VMS1Q04311 632 aaKnown RBP11.74□□□□□ -0.53
RDN18-1RDN18-1 EST2Q06163 884 aa11.74□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms