RNA–Protein interactions for RNA: YMR086W

SEG1, Transcript of Component of eisosome required for proper eisosome assembly, yeast

Gene SEG1, Length 2,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEG1	YMR086W	PET111	P08468	800 aa		4.4	□□□□□ -1.71
SEG1	YMR086W	SPC110	P32380	944 aa		4.4	□□□□□ -1.71
SEG1	YMR086W	ACP1	P32463	125 aa		4.4	□□□□□ -1.71
SEG1	YMR086W	PAF1	P38351	445 aa		4.4	□□□□□ -1.71
SEG1	YMR086W	APE4	P38821	490 aa		4.4	□□□□□ -1.71
SEG1	YMR086W	REB1	P21538	810 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
SEG1	YMR086W	SEC8	P32855	1065 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	BOI1	P38041	980 aa	Known RBP	4.39	□□□□□ -1.71
SEG1	YMR086W	RSC1	P53236	928 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	GRC3	Q07845	632 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	BMS1	Q08965	1183 aa	Known RBP	4.39	□□□□□ -1.71
SEG1	YMR086W	NOP58	Q12499	511 aa	Known RBP	4.39	□□□□□ -1.71
SEG1	YMR086W	RPL5	P26321	297 aa	Known RBP	4.39	□□□□□ -1.71
SEG1	YMR086W	URA1	P28272	314 aa	Predicted RBP	4.39	□□□□□ -1.71
SEG1	YMR086W	KIP2	P28743	706 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	HGH1	P48362	394 aa	Known RBP	4.39	□□□□□ -1.71
SEG1	YMR086W	APC5	Q08683	685 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	MSC6	Q08818	692 aa	Known RBP	4.39	□□□□□ -1.71
SEG1	YMR086W	RAD27	P26793	382 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	DEP1	P31385	405 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
SEG1	YMR086W	VPS29	P38759	282 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	VAC8	P39968	578 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	YEN1	P40028	759 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	RIC1	P40395	1056 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	NST1	P53935	1240 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	RNH1	Q04740	348 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	YDR286C	Q05530	114 aa		4.39	□□□□□ -1.71
SEG1	YMR086W	UTP13	Q05946	817 aa	Known RBP	4.39	□□□□□ -1.71
SEG1	YMR086W	AAD3	P25612	363 aa		4.38	□□□□□ -1.71
SEG1	YMR086W	PEP12	P32854	288 aa		4.38	□□□□□ -1.71
SEG1	YMR086W	VTC4	P47075	721 aa		4.38	□□□□□ -1.71
SEG1	YMR086W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
SEG1	YMR086W	VIP1	Q06685	1146 aa	Known RBP	4.38	□□□□□ -1.71
SEG1	YMR086W	PIN2	Q12057	282 aa		4.38	□□□□□ -1.71
SEG1	YMR086W	RRP36	Q12481	300 aa	Predicted RBP	4.38	□□□□□ -1.71
SEG1	YMR086W	ARC19	P33204	171 aa	Known RBP	4.38	□□□□□ -1.71
SEG1	YMR086W	TAF5	P38129	798 aa		4.38	□□□□□ -1.71
SEG1	YMR086W	ARB1	P40024	610 aa	Known RBP	4.38	□□□□□ -1.71
SEG1	YMR086W	ACF4	P47129	309 aa		4.38	□□□□□ -1.71
SEG1	YMR086W	PEX21	P50091	288 aa		4.38	□□□□□ -1.71
SEG1	YMR086W	MTO1	P53070	669 aa		4.38	□□□□□ -1.71
SEG1	YMR086W	BUD2	P33314	1104 aa		4.37	□□□□□ -1.71
SEG1	YMR086W	DAK2	P43550	591 aa		4.37	□□□□□ -1.71
SEG1	YMR086W	ARV1	Q06541	321 aa		4.37	□□□□□ -1.71
SEG1	YMR086W	BDF2	Q07442	638 aa		4.37	□□□□□ -1.71
SEG1	YMR086W	RME1	P32338	300 aa	Known RBP	4.37	□□□□□ -1.71
SEG1	YMR086W	HSE1	P38753	452 aa		4.37	□□□□□ -1.71
SEG1	YMR086W	MNN1	P39106	762 aa		4.37	□□□□□ -1.71
SEG1	YMR086W	MSH4	P40965	878 aa	Predicted RBP	4.37	□□□□□ -1.71
SEG1	YMR086W	TCB2	P48231	1178 aa		4.37	□□□□□ -1.71
SEG1	YMR086W	CTR9	P89105	1077 aa		4.37	□□□□□ -1.71
SEG1	YMR086W	KTR1	P27810	393 aa	Known RBP	4.36	□□□□□ -1.71
SEG1	YMR086W	MCM2	P29469	868 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	SAP190	P36123	1033 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	ERP5	P38819	212 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	YJR107W	P47145	328 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	PSD2	P53037	1138 aa	Known RBP	4.36	□□□□□ -1.71
SEG1	YMR086W	POB3	Q04636	552 aa	Known RBP	4.36	□□□□□ -1.71
SEG1	YMR086W	TUF1	P02992	437 aa	Known RBP	4.36	□□□□□ -1.71
SEG1	YMR086W	GUT1	P32190	709 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	SNF7	P39929	240 aa	Known RBP	4.36	□□□□□ -1.71
SEG1	YMR086W	MDJ2	P42834	146 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	MSH6	Q03834	1242 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	RPN7	Q06103	429 aa	Known RBP	4.36	□□□□□ -1.71
SEG1	YMR086W	TFB4	Q12004	338 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	MNL2	Q12205	849 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	PUS1	Q12211	544 aa	Known RBP	4.36	□□□□□ -1.71
SEG1	YMR086W	YOL087C	Q99247	1116 aa		4.36	□□□□□ -1.71
SEG1	YMR086W	LAM1	P38851	1228 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	POL32	P47110	350 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	RUD3	Q12234	484 aa	Known RBP	4.35	□□□□□ -1.71
SEG1	YMR086W	FRT1	Q99332	602 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	PEX6	P33760	1030 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	NPR3	P38742	1146 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	ALF1	P53904	254 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	ATG16	Q03818	150 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	MPC54	Q08550	464 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	RTP1	Q12751	981 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	MSH3	P25336	1018 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	SRP40	P32583	406 aa	Predicted RBP	4.35	□□□□□ -1.71
SEG1	YMR086W	YKL091C	P33324	310 aa	Known RBP	4.35	□□□□□ -1.71
SEG1	YMR086W	YKL222C	P35995	705 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	GRX7	P38068	203 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	MEF2	P39677	819 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	APP1	P53933	587 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	RPL34A	P87262	121 aa	Predicted RBP	4.35	□□□□□ -1.71
SEG1	YMR086W	MRD1	Q06106	887 aa	Known RBP	4.35	□□□□□ -1.71
SEG1	YMR086W	PGC1	Q08959	321 aa		4.35	□□□□□ -1.71
SEG1	YMR086W	RAD4	P14736	754 aa		4.34	□□□□□ -1.71
SEG1	YMR086W	RRP8	P38961	392 aa	Known RBP	4.34	□□□□□ -1.71
SEG1	YMR086W	IRR1	P40541	1150 aa		4.34	□□□□□ -1.71
SEG1	YMR086W	TIM54	P47045	478 aa		4.34	□□□□□ -1.71
SEG1	YMR086W	SXM1	Q04175	944 aa	Known RBP	4.34	□□□□□ -1.71
SEG1	YMR086W	MCD1	Q12158	566 aa		4.34	□□□□□ -1.71
SEG1	YMR086W	APN1	P22936	367 aa		4.34	□□□□□ -1.72
SEG1	YMR086W	MRPL25	P23369	157 aa		4.34	□□□□□ -1.72
SEG1	YMR086W	NIP100	P33420	868 aa		4.34	□□□□□ -1.72
SEG1	YMR086W	NOP4	P37838	685 aa	Known RBP	4.34	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms