Protein–RNA interactions for Protein: Q04740

RNH1, Ribonuclease H, yeastyeast

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RNH1Q04740 NSR1YGR159C 1245 nt18.43■□□□□ 0.54
RNH1Q04740 YML009W-BYML009W-B 477 nt18.23■□□□□ 0.51
RNH1Q04740 NOP1YDL014W 984 nt17.48■□□□□ 0.39
RNH1Q04740 MDJ1YFL016C 1536 nt16.91■□□□□ 0.3
RNH1Q04740 YKL036CYKL036C 393 nt15.66■□□□□ 0.1
RNH1Q04740 YJL027CYJL027C 417 nt15.56■□□□□ 0.08
RNH1Q04740 SRX1YKL086W 384 nt15.23■□□□□ 0.03
RNH1Q04740 Q0297Q0297 156 nt15.07■□□□□ 0
RNH1Q04740 DBP2YNL112W 1641 nt14.66□□□□□ -0.06
RNH1Q04740 YCR051WYCR051W 669 nt14.51□□□□□ -0.09
RNH1Q04740 YBR190WYBR190W 312 nt14.48□□□□□ -0.09
RNH1Q04740 SCS3YGL126W 1143 nt14.28□□□□□ -0.12
RNH1Q04740 RTC3YHR087W 336 nt14.25□□□□□ -0.13
RNH1Q04740 TRN1tP(UGG)A 72 nt14.05□□□□□ -0.16
RNH1Q04740 SUF9tP(UGG)F 72 nt14.05□□□□□ -0.16
RNH1Q04740 SUF8tP(UGG)H 72 nt14.05□□□□□ -0.16
RNH1Q04740 tP(UGG)LtP(UGG)L 72 nt14.05□□□□□ -0.16
RNH1Q04740 SUF7tP(UGG)M 72 nt14.05□□□□□ -0.16
RNH1Q04740 tP(UGG)N1tP(UGG)N1 72 nt14.05□□□□□ -0.16
RNH1Q04740 tP(UGG)N2tP(UGG)N2 72 nt14.05□□□□□ -0.16
RNH1Q04740 tP(UGG)O1tP(UGG)O1 72 nt14.05□□□□□ -0.16
RNH1Q04740 SUF11tP(UGG)O2 72 nt14.05□□□□□ -0.16
RNH1Q04740 CCC1YLR220W 969 nt14.02□□□□□ -0.17
RNH1Q04740 SSA3YBL075C 1950 nt13.78□□□□□ -0.2
RNH1Q04740 RVS167YDR388W 1449 nt13.78□□□□□ -0.2
RNH1Q04740 SCJ1YMR214W 1134 nt13.56□□□□□ -0.24
RNH1Q04740 YOL085CYOL085C 342 nt13.56□□□□□ -0.24
RNH1Q04740 RPP1BYDL130W 321 nt13.55□□□□□ -0.24
RNH1Q04740 PKP1YIL042C 1185 nt13.5□□□□□ -0.25
RNH1Q04740 PUT4YOR348C 1884 nt13.49□□□□□ -0.25
RNH1Q04740 tP(UGG)O3tP(UGG)O3 72 nt13.16□□□□□ -0.3
RNH1Q04740 SHR5YOL110W 714 nt13.13□□□□□ -0.31
RNH1Q04740 POA1YBR022W 534 nt13.12□□□□□ -0.31
RNH1Q04740 ARE1YCR048W 1833 nt13.11□□□□□ -0.31
RNH1Q04740 URN1YPR152C 1398 nt13.1□□□□□ -0.31
RNH1Q04740 SAH1YER043C 1350 nt13.06□□□□□ -0.32
RNH1Q04740 PET122YER153C 765 nt13.04□□□□□ -0.32
RNH1Q04740 YHR049C-AYHR049C-A 297 nt13.02□□□□□ -0.33
RNH1Q04740 DEP1YAL013W 1218 nt13.02□□□□□ -0.33
RNH1Q04740 OPI9YLR338W 858 nt12.96□□□□□ -0.33
RNH1Q04740 ATS1YAL020C 1002 nt12.91□□□□□ -0.34
RNH1Q04740 BSC6YOL137W 1494 nt12.91□□□□□ -0.34
RNH1Q04740 RPN10YHR200W 807 nt12.8□□□□□ -0.36
RNH1Q04740 SCR1SCR1 522 nt12.79□□□□□ -0.36
RNH1Q04740 SSA1YAL005C 1929 nt12.74□□□□□ -0.37
RNH1Q04740 BUD23YCR047C 828 nt12.74□□□□□ -0.37
RNH1Q04740 YDJ1YNL064C 1230 nt12.69□□□□□ -0.38
RNH1Q04740 YNL208WYNL208W 600 nt12.69□□□□□ -0.38
RNH1Q04740 RRN5YLR141W 1092 nt12.61□□□□□ -0.39
RNH1Q04740 PUN1YLR414C 792 nt12.61□□□□□ -0.39
RNH1Q04740 GAR1YHR089C 618 nt12.58□□□□□ -0.4
RNH1Q04740 PTC2YER089C 1395 nt12.56□□□□□ -0.4
RNH1Q04740 SPT5YML010W 3192 nt12.47□□□□□ -0.41
RNH1Q04740 YJR018WYJR018W 363 nt12.46□□□□□ -0.41
RNH1Q04740 NAB2YGL122C 1578 nt12.43□□□□□ -0.42
RNH1Q04740 FPS1YLL043W 2010 nt12.42□□□□□ -0.42
RNH1Q04740 Q0182Q0182 405 nt12.41□□□□□ -0.42
RNH1Q04740 SSA4YER103W 1929 nt12.39□□□□□ -0.43
RNH1Q04740 YER088W-BYER088W-B 147 nt12.34□□□□□ -0.43
RNH1Q04740 FPR4YLR449W 1179 nt12.26□□□□□ -0.45
RNH1Q04740 RSB1YOR049C 1065 nt12.26□□□□□ -0.45
RNH1Q04740 FIS1YIL065C 468 nt12.19□□□□□ -0.46
RNH1Q04740 DAL1YIR027C 1383 nt12.18□□□□□ -0.46
RNH1Q04740 TIR1YER011W 765 nt12.14□□□□□ -0.47
RNH1Q04740 MEP2YNL142W 1500 nt12.13□□□□□ -0.47
RNH1Q04740 RPP2BYDR382W 333 nt12.11□□□□□ -0.47
RNH1Q04740 YJR120WYJR120W 351 nt12.09□□□□□ -0.47
RNH1Q04740 PHO4YFR034C 939 nt12.08□□□□□ -0.48
RNH1Q04740 NVJ2YPR091C 2313 nt12.07□□□□□ -0.48
RNH1Q04740 INM2YDR287W 879 nt12.05□□□□□ -0.48
RNH1Q04740 YPS1YLR120C 1710 nt11.98□□□□□ -0.49
RNH1Q04740 YHR165W-AYHR165W-A 312 nt11.97□□□□□ -0.49
RNH1Q04740 DCW1YKL046C 1350 nt11.95□□□□□ -0.5
RNH1Q04740 YBL100CYBL100C 315 nt11.9□□□□□ -0.5
RNH1Q04740 PAC11YDR488C 1602 nt11.89□□□□□ -0.51
RNH1Q04740 BDF1YLR399C 2061 nt11.88□□□□□ -0.51
RNH1Q04740 PST2YDR032C 597 nt11.87□□□□□ -0.51
RNH1Q04740 YDR095CYDR095C 411 nt11.82□□□□□ -0.52
RNH1Q04740 EMI2YDR516C 1503 nt11.79□□□□□ -0.52
RNH1Q04740 YMR090WYMR090W 684 nt11.78□□□□□ -0.52
RNH1Q04740 SRB2YHR041C 633 nt11.77□□□□□ -0.53
RNH1Q04740 BDH2YAL061W 1254 nt11.73□□□□□ -0.53
RNH1Q04740 TAT1YBR069C 1860 nt11.72□□□□□ -0.53
RNH1Q04740 FUN26YAL022C 1554 nt11.72□□□□□ -0.53
RNH1Q04740 ALF1YNL148C 765 nt11.72□□□□□ -0.53
RNH1Q04740 YBR220CYBR220C 1683 nt11.68□□□□□ -0.54
RNH1Q04740 YKL097CYKL097C 411 nt11.65□□□□□ -0.54
RNH1Q04740 YDL221WYDL221W 552 nt11.64□□□□□ -0.55
RNH1Q04740 TRM9YML014W 840 nt11.64□□□□□ -0.55
RNH1Q04740 RPP2AYOL039W 321 nt11.63□□□□□ -0.55
RNH1Q04740 CAC2YML102W 1407 nt11.61□□□□□ -0.55
RNH1Q04740 PTP1YDL230W 1008 nt11.58□□□□□ -0.56
RNH1Q04740 SDH1YKL148C 1923 nt11.58□□□□□ -0.56
RNH1Q04740 WWM1YFL010C 636 nt11.54□□□□□ -0.56
RNH1Q04740 CCT6YDR188W 1641 nt11.47□□□□□ -0.57
RNH1Q04740 SUF2tP(AGG)C 72 nt11.47□□□□□ -0.57
RNH1Q04740 SUF10tP(AGG)N 72 nt11.47□□□□□ -0.57
RNH1Q04740 SCC4YER147C 1875 nt11.46□□□□□ -0.57
RNH1Q04740 LSM3YLR438C-A 270 nt11.46□□□□□ -0.57
RNH1Q04740 SIS1YNL007C 1059 nt11.44□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 48.3 ms