RNA–Protein interactions for RNA: YMR086W

SEG1, Transcript of Component of eisosome required for proper eisosome assembly, yeast

Gene SEG1, Length 2,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEG1	YMR086W	RQC2	Q12532	1038 aa	Known RBP	6.94	□□□□□ -1.3
SEG1	YMR086W	DRS1	P32892	752 aa	Known RBP	6.51	□□□□□ -1.37
SEG1	YMR086W	TFA1	P36100	482 aa		6.51	□□□□□ -1.37
SEG1	YMR086W	TAF7	Q05021	590 aa		6.44	□□□□□ -1.38
SEG1	YMR086W	BFR2	Q06631	534 aa	Known RBP	6.17	□□□□□ -1.42
SEG1	YMR086W	URN1	Q06525	465 aa	Known RBP	5.92	□□□□□ -1.46
SEG1	YMR086W	IOC4	Q04213	475 aa		5.73	□□□□□ -1.49
SEG1	YMR086W	LEO1	P38439	464 aa		5.73	□□□□□ -1.49
SEG1	YMR086W	DMA1	P38823	416 aa		5.72	□□□□□ -1.49
SEG1	YMR086W	NAP1	P25293	417 aa	Known RBP	5.63	□□□□□ -1.51
SEG1	YMR086W	AVT3	P36062	692 aa		5.62	□□□□□ -1.51
SEG1	YMR086W	IFH1	P39520	1085 aa		5.61	□□□□□ -1.51
SEG1	YMR086W	ABP1	P15891	592 aa	Known RBP	5.58	□□□□□ -1.52
SEG1	YMR086W	MTC1	P47018	478 aa	Known RBP	5.57	□□□□□ -1.52
SEG1	YMR086W	ORC1	P54784	914 aa	Predicted RBP	5.56	□□□□□ -1.52
SEG1	YMR086W	YFR016C	P43597	1233 aa	Known RBP	5.49	□□□□□ -1.53
SEG1	YMR086W	SIS2	P36024	562 aa		5.44	□□□□□ -1.54
SEG1	YMR086W	KRI1	P42846	591 aa	Known RBP	5.4	□□□□□ -1.54
SEG1	YMR086W	DIP2	Q12220	943 aa	Predicted RBP	5.39	□□□□□ -1.55
SEG1	YMR086W	YRB30	P53107	440 aa	Predicted RBP	5.35	□□□□□ -1.55
SEG1	YMR086W	SNU71	P53207	620 aa	Known RBP	5.31	□□□□□ -1.56
SEG1	YMR086W	DMA2	P53924	522 aa		5.3	□□□□□ -1.56
SEG1	YMR086W	LEU3	P08638	886 aa		5.3	□□□□□ -1.56
SEG1	YMR086W	CWC22	P53333	577 aa	Known RBP	5.3	□□□□□ -1.56
SEG1	YMR086W	ATG36	P46983	293 aa		5.28	□□□□□ -1.56
SEG1	YMR086W	EBP2	P36049	427 aa	Known RBP	5.26	□□□□□ -1.57
SEG1	YMR086W	TOP1	P04786	769 aa		5.24	□□□□□ -1.57
SEG1	YMR086W	SWE1	P32944	819 aa		5.22	□□□□□ -1.57
SEG1	YMR086W	SAS10	Q12136	610 aa	Predicted RBP	5.22	□□□□□ -1.57
SEG1	YMR086W	AIM44	Q99299	758 aa		5.22	□□□□□ -1.57
SEG1	YMR086W	MDG1	P53885	366 aa		5.18	□□□□□ -1.58
SEG1	YMR086W	RPS0B	P46654	252 aa	Known RBP	5.18	□□□□□ -1.58
SEG1	YMR086W	RLP24	Q07915	199 aa	Known RBP	5.17	□□□□□ -1.58
SEG1	YMR086W	CAB3	P36076	571 aa		5.14	□□□□□ -1.59
SEG1	YMR086W	LAM6	Q08001	693 aa		5.14	□□□□□ -1.59
SEG1	YMR086W	TPO2	P53283	614 aa		5.13	□□□□□ -1.59
SEG1	YMR086W	PSH1	Q12161	406 aa		5.13	□□□□□ -1.59
SEG1	YMR086W	RLF2	Q12495	606 aa		5.13	□□□□□ -1.59
SEG1	YMR086W	NOP8	Q08287	484 aa	Predicted RBP	5.11	□□□□□ -1.59
SEG1	YMR086W	GIN4	Q12263	1142 aa		5.08	□□□□□ -1.6
SEG1	YMR086W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
SEG1	YMR086W	ISW1	P38144	1129 aa		5.06	□□□□□ -1.6
SEG1	YMR086W	YML020W	Q03722	664 aa		5.04	□□□□□ -1.6
SEG1	YMR086W	NUG1	P40010	520 aa	Known RBP	5.03	□□□□□ -1.6
SEG1	YMR086W	FAR11	P53917	953 aa		5.01	□□□□□ -1.61
SEG1	YMR086W	SUB1	P54000	292 aa	Known RBP	5.01	□□□□□ -1.61
SEG1	YMR086W	BRL1	P38770	471 aa		5	□□□□□ -1.61
SEG1	YMR086W	TOA1	P32773	286 aa		4.99	□□□□□ -1.61
SEG1	YMR086W	MNN4	P36044	1178 aa		4.99	□□□□□ -1.61
SEG1	YMR086W	RPN1	P38764	993 aa	Known RBP	4.96	□□□□□ -1.62
SEG1	YMR086W	SSA1	P10591	642 aa	Known RBP	4.95	□□□□□ -1.62
SEG1	YMR086W	SSA2	P10592	639 aa	Known RBP	4.95	□□□□□ -1.62
SEG1	YMR086W	SPC42	P36094	363 aa		4.95	□□□□□ -1.62
SEG1	YMR086W	PTP3	P40048	928 aa		4.95	□□□□□ -1.62
SEG1	YMR086W	DAL5	P15365	543 aa		4.94	□□□□□ -1.62
SEG1	YMR086W	HIF1	Q12373	385 aa		4.94	□□□□□ -1.62
SEG1	YMR086W	VPS72	Q03388	795 aa		4.94	□□□□□ -1.62
SEG1	YMR086W	SSP1	P38871	571 aa		4.93	□□□□□ -1.62
SEG1	YMR086W	BUD21	Q08492	214 aa	Predicted RBP	4.93	□□□□□ -1.62
SEG1	YMR086W	SSF1	P38789	453 aa	Predicted RBP	4.92	□□□□□ -1.62
SEG1	YMR086W	GRX3	Q03835	250 aa		4.92	□□□□□ -1.62
SEG1	YMR086W	DEF1	P35732	738 aa	Known RBP	4.92	□□□□□ -1.62
SEG1	YMR086W	PAM1	P37304	830 aa	Known RBP	4.92	□□□□□ -1.62
SEG1	YMR086W	MRX12	P47084	519 aa		4.91	□□□□□ -1.62
SEG1	YMR086W	ENV11	P53246	860 aa		4.91	□□□□□ -1.62
SEG1	YMR086W	OSW7	P43611	510 aa		4.9	□□□□□ -1.62
SEG1	YMR086W	CKB1	P43639	278 aa		4.9	□□□□□ -1.62
SEG1	YMR086W	YJR008W	P47085	338 aa		4.9	□□□□□ -1.62
SEG1	YMR086W	DOS2	P54858	310 aa		4.9	□□□□□ -1.62
SEG1	YMR086W	PDR1	P12383	1068 aa		4.9	□□□□□ -1.63
SEG1	YMR086W	TIF4632	P39936	914 aa	Known RBP	4.89	□□□□□ -1.63
SEG1	YMR086W	ZDS1	P50111	915 aa	Known RBP	4.88	□□□□□ -1.63
SEG1	YMR086W	NHA1	Q99271	985 aa		4.88	□□□□□ -1.63
SEG1	YMR086W	BRN1	P38170	754 aa		4.87	□□□□□ -1.63
SEG1	YMR086W	SLX8	P40072	274 aa		4.87	□□□□□ -1.63
SEG1	YMR086W	MAM3	Q12296	706 aa		4.87	□□□□□ -1.63
SEG1	YMR086W	TAF13	P11747	167 aa		4.86	□□□□□ -1.63
SEG1	YMR086W	ASF1	P32447	279 aa		4.86	□□□□□ -1.63
SEG1	YMR086W	GEF1	P37020	779 aa		4.86	□□□□□ -1.63
SEG1	YMR086W	RTS3	P53289	263 aa		4.86	□□□□□ -1.63
SEG1	YMR086W	OCA5	P38738	679 aa		4.85	□□□□□ -1.63
SEG1	YMR086W	BRE1	Q07457	700 aa	Known RBP	4.85	□□□□□ -1.63
SEG1	YMR086W	YTA7	P40340	1379 aa		4.84	□□□□□ -1.63
SEG1	YMR086W	QCR6	P00127	147 aa		4.84	□□□□□ -1.63
SEG1	YMR086W	KIP3	P53086	805 aa	Known RBP	4.83	□□□□□ -1.64
SEG1	YMR086W	PMC1	P38929	1173 aa	Predicted RBP	4.81	□□□□□ -1.64
SEG1	YMR086W	UBX5	Q06682	500 aa		4.8	□□□□□ -1.64
SEG1	YMR086W	RPA135	P22138	1203 aa	Known RBP	4.8	□□□□□ -1.64
SEG1	YMR086W	AIM21	P40563	679 aa		4.79	□□□□□ -1.64
SEG1	YMR086W	RAD2	P07276	1031 aa		4.78	□□□□□ -1.64
SEG1	YMR086W	SVL3	Q03088	825 aa	Known RBP	4.78	□□□□□ -1.64
SEG1	YMR086W	YPR148C	Q06523	435 aa		4.78	□□□□□ -1.64
SEG1	YMR086W	GAL11	P19659	1081 aa		4.78	□□□□□ -1.64
SEG1	YMR086W	NOP2	P40991	618 aa	Known RBP	4.78	□□□□□ -1.64
SEG1	YMR086W	NFU1	P32860	256 aa		4.77	□□□□□ -1.65
SEG1	YMR086W	TLG1	Q03322	224 aa		4.77	□□□□□ -1.65
SEG1	YMR086W	SUB2	Q07478	446 aa	Known RBP	4.77	□□□□□ -1.65
SEG1	YMR086W	MPP10	P47083	593 aa	Known RBP	4.76	□□□□□ -1.65
SEG1	YMR086W	RPS0A	P32905	252 aa	Known RBP	4.76	□□□□□ -1.65
SEG1	YMR086W	SEN54	Q02825	467 aa	Predicted RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms