Protein–RNA interactions for Protein: P40541

IRR1, Cohesin subunit SCC3, yeastyeast

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IRR1P40541 YML009W-BYML009W-B 477 nt20.34■□□□□ 0.85
IRR1P40541 NSR1YGR159C 1245 nt20.23■□□□□ 0.83
IRR1P40541 NOP1YDL014W 984 nt19.83■□□□□ 0.77
IRR1P40541 YKL036CYKL036C 393 nt18.33■□□□□ 0.52
IRR1P40541 MDJ1YFL016C 1536 nt17.86■□□□□ 0.45
IRR1P40541 Q0297Q0297 156 nt17.39■□□□□ 0.37
IRR1P40541 SRX1YKL086W 384 nt17.33■□□□□ 0.36
IRR1P40541 YJL027CYJL027C 417 nt17.1■□□□□ 0.33
IRR1P40541 SCS3YGL126W 1143 nt16.69■□□□□ 0.26
IRR1P40541 YCR051WYCR051W 669 nt16.4■□□□□ 0.22
IRR1P40541 YOL085CYOL085C 342 nt15.88■□□□□ 0.13
IRR1P40541 DBP2YNL112W 1641 nt15.86■□□□□ 0.13
IRR1P40541 TRN1tP(UGG)A 72 nt15.65■□□□□ 0.1
IRR1P40541 SUF9tP(UGG)F 72 nt15.65■□□□□ 0.1
IRR1P40541 SUF8tP(UGG)H 72 nt15.65■□□□□ 0.1
IRR1P40541 tP(UGG)LtP(UGG)L 72 nt15.65■□□□□ 0.1
IRR1P40541 SUF7tP(UGG)M 72 nt15.65■□□□□ 0.1
IRR1P40541 tP(UGG)N1tP(UGG)N1 72 nt15.65■□□□□ 0.1
IRR1P40541 tP(UGG)N2tP(UGG)N2 72 nt15.65■□□□□ 0.1
IRR1P40541 tP(UGG)O1tP(UGG)O1 72 nt15.65■□□□□ 0.1
IRR1P40541 SUF11tP(UGG)O2 72 nt15.65■□□□□ 0.1
IRR1P40541 RPP1BYDL130W 321 nt15.59■□□□□ 0.09
IRR1P40541 PKP1YIL042C 1185 nt15.58■□□□□ 0.08
IRR1P40541 CCC1YLR220W 969 nt15.42■□□□□ 0.06
IRR1P40541 YBR190WYBR190W 312 nt15.27■□□□□ 0.04
IRR1P40541 SSA3YBL075C 1950 nt15.1■□□□□ 0.01
IRR1P40541 ATS1YAL020C 1002 nt14.95□□□□□ -0.02
IRR1P40541 RVS167YDR388W 1449 nt14.91□□□□□ -0.02
IRR1P40541 SCJ1YMR214W 1134 nt14.9□□□□□ -0.02
IRR1P40541 PET122YER153C 765 nt14.87□□□□□ -0.03
IRR1P40541 RTC3YHR087W 336 nt14.87□□□□□ -0.03
IRR1P40541 tP(UGG)O3tP(UGG)O3 72 nt14.81□□□□□ -0.04
IRR1P40541 SCR1SCR1 522 nt14.73□□□□□ -0.05
IRR1P40541 RRN5YLR141W 1092 nt14.45□□□□□ -0.1
IRR1P40541 SHR5YOL110W 714 nt14.42□□□□□ -0.1
IRR1P40541 Q0182Q0182 405 nt14.36□□□□□ -0.11
IRR1P40541 YDJ1YNL064C 1230 nt14.35□□□□□ -0.11
IRR1P40541 YER088W-BYER088W-B 147 nt14.17□□□□□ -0.14
IRR1P40541 RSB1YOR049C 1065 nt14.14□□□□□ -0.15
IRR1P40541 GAR1YHR089C 618 nt13.97□□□□□ -0.17
IRR1P40541 URN1YPR152C 1398 nt13.96□□□□□ -0.17
IRR1P40541 DEP1YAL013W 1218 nt13.94□□□□□ -0.18
IRR1P40541 MOT3YMR070W 1473 nt13.92□□□□□ -0.18
IRR1P40541 PUT4YOR348C 1884 nt13.89□□□□□ -0.19
IRR1P40541 PST2YDR032C 597 nt13.86□□□□□ -0.19
IRR1P40541 RPN10YHR200W 807 nt13.79□□□□□ -0.2
IRR1P40541 OPI9YLR338W 858 nt13.78□□□□□ -0.2
IRR1P40541 YNL208WYNL208W 600 nt13.77□□□□□ -0.21
IRR1P40541 SAH1YER043C 1350 nt13.65□□□□□ -0.22
IRR1P40541 ARE1YCR048W 1833 nt13.57□□□□□ -0.24
IRR1P40541 TIR1YER011W 765 nt13.52□□□□□ -0.25
IRR1P40541 POA1YBR022W 534 nt13.4□□□□□ -0.26
IRR1P40541 YHR049C-AYHR049C-A 297 nt13.38□□□□□ -0.27
IRR1P40541 PUN1YLR414C 792 nt13.38□□□□□ -0.27
IRR1P40541 SPT5YML010W 3192 nt13.34□□□□□ -0.27
IRR1P40541 SSA1YAL005C 1929 nt13.34□□□□□ -0.27
IRR1P40541 YJR018WYJR018W 363 nt13.33□□□□□ -0.28
IRR1P40541 YKL097CYKL097C 411 nt13.3□□□□□ -0.28
IRR1P40541 SHU1YHL006C 453 nt13.26□□□□□ -0.29
IRR1P40541 SSA4YER103W 1929 nt13.25□□□□□ -0.29
IRR1P40541 BSC6YOL137W 1494 nt13.24□□□□□ -0.29
IRR1P40541 PTC2YER089C 1395 nt13.18□□□□□ -0.3
IRR1P40541 YJR120WYJR120W 351 nt13.15□□□□□ -0.3
IRR1P40541 SRB2YHR041C 633 nt13.12□□□□□ -0.31
IRR1P40541 RPP2BYDR382W 333 nt13.08□□□□□ -0.32
IRR1P40541 BUD23YCR047C 828 nt13.05□□□□□ -0.32
IRR1P40541 NAB2YGL122C 1578 nt13.03□□□□□ -0.32
IRR1P40541 YAL037C-BYAL037C-B 975 nt13.01□□□□□ -0.33
IRR1P40541 WWM1YFL010C 636 nt12.91□□□□□ -0.34
IRR1P40541 YGR021WYGR021W 873 nt12.89□□□□□ -0.35
IRR1P40541 INM2YDR287W 879 nt12.87□□□□□ -0.35
IRR1P40541 DAL1YIR027C 1383 nt12.86□□□□□ -0.35
IRR1P40541 BDF1YLR399C 2061 nt12.86□□□□□ -0.35
IRR1P40541 FIS1YIL065C 468 nt12.84□□□□□ -0.35
IRR1P40541 HOM6YJR139C 1080 nt12.84□□□□□ -0.35
IRR1P40541 BDH2YAL061W 1254 nt12.84□□□□□ -0.35
IRR1P40541 YOR139CYOR139C 393 nt12.78□□□□□ -0.36
IRR1P40541 FPR4YLR449W 1179 nt12.77□□□□□ -0.37
IRR1P40541 MNP1YGL068W 585 nt12.75□□□□□ -0.37
IRR1P40541 YFL021C-AYFL021C-A 855 nt12.74□□□□□ -0.37
IRR1P40541 YBL100CYBL100C 315 nt12.74□□□□□ -0.37
IRR1P40541 PHO4YFR034C 939 nt12.73□□□□□ -0.37
IRR1P40541 LSM3YLR438C-A 270 nt12.71□□□□□ -0.37
IRR1P40541 RKM5YLR137W 1104 nt12.65□□□□□ -0.38
IRR1P40541 TAT1YBR069C 1860 nt12.65□□□□□ -0.38
IRR1P40541 NPL3YDR432W 1245 nt12.64□□□□□ -0.39
IRR1P40541 YOL037CYOL037C 354 nt12.61□□□□□ -0.39
IRR1P40541 FUN26YAL022C 1554 nt12.59□□□□□ -0.39
IRR1P40541 TRM9YML014W 840 nt12.57□□□□□ -0.4
IRR1P40541 PAC11YDR488C 1602 nt12.55□□□□□ -0.4
IRR1P40541 MEP2YNL142W 1500 nt12.52□□□□□ -0.41
IRR1P40541 YPS1YLR120C 1710 nt12.48□□□□□ -0.41
IRR1P40541 CCT6YDR188W 1641 nt12.47□□□□□ -0.41
IRR1P40541 FPS1YLL043W 2010 nt12.45□□□□□ -0.42
IRR1P40541 YDR095CYDR095C 411 nt12.42□□□□□ -0.42
IRR1P40541 ALF1YNL148C 765 nt12.38□□□□□ -0.43
IRR1P40541 SUF2tP(AGG)C 72 nt12.35□□□□□ -0.43
IRR1P40541 SUF10tP(AGG)N 72 nt12.35□□□□□ -0.43
IRR1P40541 DCW1YKL046C 1350 nt12.34□□□□□ -0.43
IRR1P40541 YHR165W-AYHR165W-A 312 nt12.3□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms