RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W LAM1P38851 1228 aa8.34□□□□□ -1.07
CTF3YLR381W BEM4P39011 633 aa8.34□□□□□ -1.07
CTF3YLR381W YRB1P41920 201 aaKnown RBP8.34□□□□□ -1.07
CTF3YLR381W SHE4P51534 789 aa8.34□□□□□ -1.07
CTF3YLR381W IST1P53843 298 aaPredicted RBP8.34□□□□□ -1.07
CTF3YLR381W RPL5P26321 297 aaKnown RBP8.33□□□□□ -1.08
CTF3YLR381W TIF3P34167 436 aaKnown RBP8.33□□□□□ -1.08
CTF3YLR381W HYR1P40581 163 aaKnown RBP8.33□□□□□ -1.08
CTF3YLR381W ADE12P80210 433 aaKnown RBP8.33□□□□□ -1.08
CTF3YLR381W CAT8P39113 1433 aa8.33□□□□□ -1.08
CTF3YLR381W RKR1Q04781 1562 aa8.33□□□□□ -1.08
CTF3YLR381W VMS1Q04311 632 aaKnown RBP8.33□□□□□ -1.08
CTF3YLR381W AOS1Q06624 347 aa8.33□□□□□ -1.08
CTF3YLR381W CDC37P06101 506 aaKnown RBP8.32□□□□□ -1.08
CTF3YLR381W SKI2P35207 1287 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
CTF3YLR381W MNR2P35724 969 aa8.32□□□□□ -1.08
CTF3YLR381W HUL5P53119 910 aa8.31□□□□□ -1.08
CTF3YLR381W YGL082WP53155 381 aa8.31□□□□□ -1.08
CTF3YLR381W MSB4Q12317 492 aa8.31□□□□□ -1.08
CTF3YLR381W ATG2P53855 1592 aa8.31□□□□□ -1.08
CTF3YLR381W RPC37P36121 282 aa8.3□□□□□ -1.08
CTF3YLR381W CTK3P46963 296 aaPredicted RBP8.3□□□□□ -1.08
CTF3YLR381W TY3B-GQ99315 1547 aa8.3□□□□□ -1.08
CTF3YLR381W RFC5P38251 354 aa8.3□□□□□ -1.08
CTF3YLR381W YIL092WP40497 633 aa8.3□□□□□ -1.08
CTF3YLR381W SPR3P41901 512 aa8.3□□□□□ -1.08
CTF3YLR381W SUM1P46676 1062 aa8.3□□□□□ -1.08
CTF3YLR381W LCB5Q06147 687 aaKnown RBP8.3□□□□□ -1.08
CTF3YLR381W PSR1Q07800 427 aa8.3□□□□□ -1.08
CTF3YLR381W SLX4Q12098 748 aa8.3□□□□□ -1.08
CTF3YLR381W NPA3P47122 385 aa8.29□□□□□ -1.08
CTF3YLR381W CWH41P53008 833 aa8.29□□□□□ -1.08
CTF3YLR381W HST2P53686 357 aa8.29□□□□□ -1.08
CTF3YLR381W HOT1Q03213 719 aa8.29□□□□□ -1.08
CTF3YLR381W HRQ1Q05549 1077 aa8.29□□□□□ -1.08
CTF3YLR381W SMC6Q12749 1114 aa8.29□□□□□ -1.08
CTF3YLR381W RTC1Q08281 1341 aa8.29□□□□□ -1.08
CTF3YLR381W RRP1P35178 278 aaPredicted RBP8.29□□□□□ -1.08
CTF3YLR381W ALD2P47771 506 aa8.29□□□□□ -1.08
CTF3YLR381W DNF2Q12675 1612 aa8.28□□□□□ -1.08
CTF3YLR381W CMS1Q07897 291 aaKnown RBP8.28□□□□□ -1.08
CTF3YLR381W APC11Q12157 165 aa8.28□□□□□ -1.08
CTF3YLR381W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.27□□□□□ -1.08not detected
CTF3YLR381W COG4Q06096 861 aa8.27□□□□□ -1.08
CTF3YLR381W ABP140Q08641 628 aaKnown RBP8.27□□□□□ -1.08
CTF3YLR381W HEL1P36113 551 aa8.27□□□□□ -1.09
CTF3YLR381W ERC1P38767 581 aa8.27□□□□□ -1.09
CTF3YLR381W YJR142WP47173 342 aa8.27□□□□□ -1.09
CTF3YLR381W YNL247WP53852 767 aaKnown RBP8.27□□□□□ -1.09
CTF3YLR381W ASI1P54074 624 aa8.27□□□□□ -1.09
CTF3YLR381W YDR341CQ05506 607 aaKnown RBP8.27□□□□□ -1.09
CTF3YLR381W ATG26Q06321 1198 aa8.27□□□□□ -1.09
CTF3YLR381W NOC3Q07896 663 aaPredicted RBP8.27□□□□□ -1.09
CTF3YLR381W DAL5P15365 543 aa8.26□□□□□ -1.09
CTF3YLR381W CDC10P25342 322 aaKnown RBP8.26□□□□□ -1.09
CTF3YLR381W TPD3P31383 635 aa8.26□□□□□ -1.09
CTF3YLR381W ELM1P32801 640 aa8.26□□□□□ -1.09
CTF3YLR381W TY4A-HQ6Q5P6 413 aa8.26□□□□□ -1.09
CTF3YLR381W RGD1P38339 666 aa8.26□□□□□ -1.09
CTF3YLR381W SHC1P39000 512 aa8.26□□□□□ -1.09
CTF3YLR381W TAF1P46677 1066 aa8.26□□□□□ -1.09
CTF3YLR381W TIM11P81449 96 aaPredicted RBP8.26□□□□□ -1.09
CTF3YLR381W TSR1Q07381 788 aaKnown RBP8.26□□□□□ -1.09
CTF3YLR381W CIR2Q08822 631 aa8.26□□□□□ -1.09
CTF3YLR381W BIK1P11709 440 aa8.25□□□□□ -1.09
CTF3YLR381W KAR9P32526 644 aa8.25□□□□□ -1.09
CTF3YLR381W BRL1P38770 471 aa8.25□□□□□ -1.09
CTF3YLR381W YGL081WP53156 320 aa8.25□□□□□ -1.09
CTF3YLR381W BTN2P53286 410 aa8.25□□□□□ -1.09
CTF3YLR381W RSA3Q05942 220 aaKnown RBP8.25□□□□□ -1.09
CTF3YLR381W OMS1Q06668 471 aa8.25□□□□□ -1.09
CTF3YLR381W ATG9Q12142 997 aa8.25□□□□□ -1.09
CTF3YLR381W UBP14P38237 781 aaKnown RBP8.25□□□□□ -1.09
CTF3YLR381W YFR006WP43590 535 aa8.25□□□□□ -1.09
CTF3YLR381W SYH1Q02875 849 aaKnown RBP8.25□□□□□ -1.09
CTF3YLR381W KRE28Q04431 385 aa8.25□□□□□ -1.09
CTF3YLR381W YDR338CQ05497 695 aa8.25□□□□□ -1.09
CTF3YLR381W CHS5Q12114 671 aaKnown RBP8.25□□□□□ -1.09
CTF3YLR381W SAC3P46674 1301 aa8.24□□□□□ -1.09
CTF3YLR381W STE11P23561 717 aa8.24□□□□□ -1.09
CTF3YLR381W RTF1P53064 558 aa8.24□□□□□ -1.09
CTF3YLR381W VPS20Q04272 221 aa8.24□□□□□ -1.09
CTF3YLR381W UTP4Q06679 776 aaKnown RBP8.24□□□□□ -1.09
CTF3YLR381W HAP1P0CE41 1502 aa8.24□□□□□ -1.09
CTF3YLR381W DLD1P32891 587 aa8.23□□□□□ -1.09
CTF3YLR381W DID4P36108 232 aa8.23□□□□□ -1.09
CTF3YLR381W IOC2Q12072 812 aa8.23□□□□□ -1.09
CTF3YLR381W SES1P07284 462 aaKnown RBP8.23□□□□□ -1.09
CTF3YLR381W CDC48P25694 835 aaKnown RBP8.23□□□□□ -1.09
CTF3YLR381W SCT1P32784 759 aa8.23□□□□□ -1.09
CTF3YLR381W SPT8P38915 602 aa8.23□□□□□ -1.09
CTF3YLR381W YML119WQ03208 357 aa8.23□□□□□ -1.09
CTF3YLR381W CLF1Q12309 687 aaPredicted RBP8.23□□□□□ -1.09
CTF3YLR381W DRS2P39524 1355 aa8.23□□□□□ -1.09
CTF3YLR381W SEC20P28791 383 aa8.22□□□□□ -1.09
CTF3YLR381W MET4P32389 672 aa8.22□□□□□ -1.09
CTF3YLR381W YIR042CP40586 236 aa8.22□□□□□ -1.09
CTF3YLR381W ORM1P53224 222 aa8.22□□□□□ -1.09
CTF3YLR381W CUS1Q02554 436 aaPredicted RBP8.22□□□□□ -1.09
CTF3YLR381W RRP9Q06506 573 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms