RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W BFR2Q06631 534 aaKnown RBP11.64□□□□□ -0.55
CTF3YLR381W RQC2Q12532 1038 aaKnown RBP11.45□□□□□ -0.58
CTF3YLR381W NOP2P40991 618 aaKnown RBP10.91□□□□□ -0.66
CTF3YLR381W CAB3P36076 571 aa10.61□□□□□ -0.71
CTF3YLR381W EBP2P36049 427 aaKnown RBP10.6□□□□□ -0.71
CTF3YLR381W NSR1P27476 414 aaKnown RBP RIP-Chip data10.46□□□□□ -0.73not detected
CTF3YLR381W URN1Q06525 465 aaKnown RBP10.44□□□□□ -0.74
CTF3YLR381W SKI3P17883 1432 aaKnown RBP10.33□□□□□ -0.76
CTF3YLR381W SIS2P36024 562 aa10.33□□□□□ -0.76
CTF3YLR381W SPA2P23201 1466 aaKnown RBP10.28□□□□□ -0.76
CTF3YLR381W YPR148CQ06523 435 aa10.09□□□□□ -0.79
CTF3YLR381W TAF7Q05021 590 aa10.03□□□□□ -0.8
CTF3YLR381W SSN2P38931 1420 aa9.98□□□□□ -0.81
CTF3YLR381W SGS1P35187 1447 aa9.88□□□□□ -0.83
CTF3YLR381W YFR016CP43597 1233 aaKnown RBP9.88□□□□□ -0.83
CTF3YLR381W ENP1P38333 483 aaKnown RBP9.87□□□□□ -0.83
CTF3YLR381W TCB2P48231 1178 aa9.83□□□□□ -0.84
CTF3YLR381W AVT3P36062 692 aa9.82□□□□□ -0.84
CTF3YLR381W TCB3Q03640 1545 aaKnown RBP9.81□□□□□ -0.84
CTF3YLR381W RPS0BP46654 252 aaKnown RBP9.8□□□□□ -0.84
CTF3YLR381W DRS1P32892 752 aaKnown RBP9.76□□□□□ -0.85
CTF3YLR381W MNN4P36044 1178 aa9.74□□□□□ -0.85
CTF3YLR381W TFA1P36100 482 aa9.68□□□□□ -0.86
CTF3YLR381W STH1P32597 1359 aa9.61□□□□□ -0.87
CTF3YLR381W CLC1P17891 233 aa9.6□□□□□ -0.87
CTF3YLR381W QCR6P00127 147 aa9.58□□□□□ -0.88
CTF3YLR381W RLF2Q12495 606 aa9.56□□□□□ -0.88
CTF3YLR381W CHD1P32657 1468 aa9.56□□□□□ -0.88
CTF3YLR381W CWC22P53333 577 aaKnown RBP9.55□□□□□ -0.88
CTF3YLR381W YRB30P53107 440 aaPredicted RBP9.55□□□□□ -0.88
CTF3YLR381W LEO1P38439 464 aa9.53□□□□□ -0.88
CTF3YLR381W DIP2Q12220 943 aaPredicted RBP9.52□□□□□ -0.89
CTF3YLR381W RSE1Q04693 1361 aaKnown RBP9.52□□□□□ -0.89
CTF3YLR381W SEC3P33332 1336 aaKnown RBP9.51□□□□□ -0.89
CTF3YLR381W IME2P32581 645 aa9.51□□□□□ -0.89
CTF3YLR381W AIM44Q99299 758 aa9.51□□□□□ -0.89
CTF3YLR381W MMS22Q06164 1454 aa9.5□□□□□ -0.89
CTF3YLR381W NOP53Q12080 455 aaKnown RBP9.5□□□□□ -0.89
CTF3YLR381W KRI1P42846 591 aaKnown RBP9.49□□□□□ -0.89
CTF3YLR381W UFD4P33202 1483 aa9.47□□□□□ -0.89
CTF3YLR381W PRS1P32895 427 aaKnown RBP9.46□□□□□ -0.89
CTF3YLR381W POL5P39985 1022 aaKnown RBP9.46□□□□□ -0.89
CTF3YLR381W FPR3P38911 411 aaKnown RBP9.45□□□□□ -0.9
CTF3YLR381W NUG1P40010 520 aaKnown RBP9.44□□□□□ -0.9
CTF3YLR381W YGR130CP53278 816 aa9.43□□□□□ -0.9
CTF3YLR381W SPP41P38904 1435 aa9.43□□□□□ -0.9
CTF3YLR381W DEF1P35732 738 aaKnown RBP9.43□□□□□ -0.9
CTF3YLR381W SPT7P35177 1332 aa9.42□□□□□ -0.9
CTF3YLR381W ENV11P53246 860 aa9.4□□□□□ -0.9
CTF3YLR381W ECM5Q03214 1411 aa9.38□□□□□ -0.91
CTF3YLR381W RIX1P38883 763 aaPredicted RBP9.36□□□□□ -0.91
CTF3YLR381W EAF7P53911 425 aaKnown RBP9.35□□□□□ -0.91
CTF3YLR381W INO80P53115 1489 aa9.34□□□□□ -0.91
CTF3YLR381W OPY1P38271 328 aa9.33□□□□□ -0.92
CTF3YLR381W XRN1P22147 1528 aaKnown RBP9.33□□□□□ -0.92
CTF3YLR381W RNA1P11745 407 aaKnown RBP9.29□□□□□ -0.92
CTF3YLR381W FPR4Q06205 392 aaPredicted RBP9.28□□□□□ -0.92
CTF3YLR381W IKI3Q06706 1349 aaKnown RBP9.27□□□□□ -0.92
CTF3YLR381W SPT21P35209 758 aa9.26□□□□□ -0.93
CTF3YLR381W SNF7P39929 240 aaKnown RBP9.25□□□□□ -0.93
CTF3YLR381W MTC1P47018 478 aaKnown RBP9.24□□□□□ -0.93
CTF3YLR381W MON2P48563 1636 aaPredicted RBP9.24□□□□□ -0.93
CTF3YLR381W PAF1P38351 445 aa9.23□□□□□ -0.93
CTF3YLR381W TRM732Q03496 1420 aa9.23□□□□□ -0.93
CTF3YLR381W SPT2P06843 333 aaPredicted RBP9.22□□□□□ -0.93
CTF3YLR381W RPC31P17890 251 aa9.21□□□□□ -0.94
CTF3YLR381W FUN12P39730 1002 aaKnown RBP9.2□□□□□ -0.94
CTF3YLR381W PLP2Q12017 286 aa9.2□□□□□ -0.94
CTF3YLR381W HSP82P02829 709 aaKnown RBP9.2□□□□□ -0.94
CTF3YLR381W SPC110P32380 944 aa9.2□□□□□ -0.94
CTF3YLR381W YTA7P40340 1379 aa9.19□□□□□ -0.94
CTF3YLR381W CFT1Q06632 1357 aaKnown RBP9.19□□□□□ -0.94
CTF3YLR381W SAS10Q12136 610 aaPredicted RBP9.18□□□□□ -0.94
CTF3YLR381W NMD2P38798 1089 aaKnown RBP9.17□□□□□ -0.94
CTF3YLR381W PSH1Q12161 406 aa9.16□□□□□ -0.94
CTF3YLR381W TOP2P06786 1428 aaKnown RBP9.16□□□□□ -0.94
CTF3YLR381W PEP1P32319 1579 aa9.16□□□□□ -0.94
CTF3YLR381W SRB8P25648 1427 aa9.14□□□□□ -0.95
CTF3YLR381W NOP58Q12499 511 aaKnown RBP9.13□□□□□ -0.95
CTF3YLR381W BUD4P47136 1447 aa9.13□□□□□ -0.95
CTF3YLR381W ROX1P25042 368 aa9.13□□□□□ -0.95
CTF3YLR381W NAP1P25293 417 aaKnown RBP9.1□□□□□ -0.95
CTF3YLR381W YIR014WP40570 242 aa9.08□□□□□ -0.96
CTF3YLR381W YLR419WQ06698 1435 aaKnown RBP9.08□□□□□ -0.96
CTF3YLR381W SMC3P47037 1230 aa9.07□□□□□ -0.96
CTF3YLR381W PIL1P53252 339 aaKnown RBP9.07□□□□□ -0.96
CTF3YLR381W MMS1Q06211 1407 aa9.05□□□□□ -0.96
CTF3YLR381W CTR9P89105 1077 aa9.05□□□□□ -0.96
CTF3YLR381W YNL011CP53980 444 aa9.05□□□□□ -0.96
CTF3YLR381W SSM4P40318 1319 aa9.04□□□□□ -0.96
CTF3YLR381W VPS4P52917 437 aa9.04□□□□□ -0.96
CTF3YLR381W SLN1P39928 1220 aaPredicted RBP9.04□□□□□ -0.96
CTF3YLR381W RAD26P40352 1085 aa9.03□□□□□ -0.96
CTF3YLR381W RTT106P40161 455 aa9.02□□□□□ -0.97
CTF3YLR381W MSH4P40965 878 aaPredicted RBP9.01□□□□□ -0.97
CTF3YLR381W NUP170P38181 1502 aa9□□□□□ -0.97
CTF3YLR381W NOT3P06102 836 aaKnown RBP9□□□□□ -0.97
CTF3YLR381W ABP1P15891 592 aaKnown RBP9□□□□□ -0.97
CTF3YLR381W PDR10P51533 1564 aa8.99□□□□□ -0.97
CTF3YLR381W LEU3P08638 886 aa8.99□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms