RNA–Protein interactions for RNA: YCR081W

SRB8, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB8, Length 4,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB8YCR081W SWH1P35845 1188 aa3.16□□□□□ -1.9
SRB8YCR081W TPM2P40414 161 aa3.16□□□□□ -1.9
SRB8YCR081W KEL2P50090 882 aa3.16□□□□□ -1.9
SRB8YCR081W KIP3P53086 805 aaKnown RBP3.16□□□□□ -1.9
SRB8YCR081W LYS2P07702 1392 aa3.16□□□□□ -1.9
SRB8YCR081W ADE12P80210 433 aaKnown RBP3.16□□□□□ -1.9
SRB8YCR081W YPR172WQ06608 200 aa3.16□□□□□ -1.9
SRB8YCR081W YKR023WP36119 530 aaKnown RBP3.15□□□□□ -1.9
SRB8YCR081W RLP24Q07915 199 aaKnown RBP3.15□□□□□ -1.9
SRB8YCR081W PCL8Q08966 492 aa3.15□□□□□ -1.9
SRB8YCR081W SPT5P27692 1063 aaKnown RBP3.15□□□□□ -1.91
SRB8YCR081W PRP43P53131 767 aaKnown RBP3.15□□□□□ -1.91
SRB8YCR081W RVB2Q12464 471 aaKnown RBP3.15□□□□□ -1.91
SRB8YCR081W SSK22P25390 1331 aaPredicted RBP3.15□□□□□ -1.91
SRB8YCR081W ARD1P07347 238 aaPredicted RBP3.15□□□□□ -1.91
SRB8YCR081W RTT107P38850 1070 aa3.15□□□□□ -1.91
SRB8YCR081W RTS3P53289 263 aa3.15□□□□□ -1.91
SRB8YCR081W YNL247WP53852 767 aaKnown RBP3.15□□□□□ -1.91
SRB8YCR081W GRX3Q03835 250 aa3.15□□□□□ -1.91
SRB8YCR081W ARR1Q06596 294 aa3.15□□□□□ -1.91
SRB8YCR081W HMI1Q12039 706 aa3.15□□□□□ -1.91
SRB8YCR081W HAA1Q12753 694 aaKnown RBP3.15□□□□□ -1.91
SRB8YCR081W TAF13P11747 167 aa3.14□□□□□ -1.91
SRB8YCR081W BUD14P27637 709 aa3.14□□□□□ -1.91
SRB8YCR081W YME2P32843 850 aa3.14□□□□□ -1.91
SRB8YCR081W YPP1P46951 817 aa3.14□□□□□ -1.91
SRB8YCR081W ORM1P53224 222 aa3.14□□□□□ -1.91
SRB8YCR081W HST2P53686 357 aa3.14□□□□□ -1.91
SRB8YCR081W NOP15P53927 220 aaPredicted RBP3.14□□□□□ -1.91
SRB8YCR081W DNL4Q08387 944 aaPredicted RBP3.14□□□□□ -1.91
SRB8YCR081W PUS1Q12211 544 aaKnown RBP3.14□□□□□ -1.91
SRB8YCR081W RRP14P36080 434 aaKnown RBP3.14□□□□□ -1.91
SRB8YCR081W MRC1P25588 1096 aa3.14□□□□□ -1.91
SRB8YCR081W DEP1P31385 405 aa3.14□□□□□ -1.91
SRB8YCR081W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
SRB8YCR081W AIM21P40563 679 aa3.14□□□□□ -1.91
SRB8YCR081W CIR1P42940 261 aa3.14□□□□□ -1.91
SRB8YCR081W FAR11P53917 953 aa3.14□□□□□ -1.91
SRB8YCR081W PHO84P25297 587 aaKnown RBP3.13□□□□□ -1.91
SRB8YCR081W AIM20P40451 204 aa3.13□□□□□ -1.91
SRB8YCR081W BUD27P43573 796 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
SRB8YCR081W YDR341CQ05506 607 aaKnown RBP3.13□□□□□ -1.91
SRB8YCR081W FAS2P19097 1887 aaKnown RBP3.13□□□□□ -1.91
SRB8YCR081W RSF2P46974 1380 aa3.13□□□□□ -1.91
SRB8YCR081W RAD2P07276 1031 aa3.13□□□□□ -1.91
SRB8YCR081W TPS3P38426 1054 aaKnown RBP3.13□□□□□ -1.91
SRB8YCR081W ATG26Q06321 1198 aa3.13□□□□□ -1.91
SRB8YCR081W MDM38Q08179 573 aa3.13□□□□□ -1.91
SRB8YCR081W LTE1P07866 1435 aa3.13□□□□□ -1.91
SRB8YCR081W MRPS28P21771 286 aa3.13□□□□□ -1.91
SRB8YCR081W SEC14P24280 304 aaKnown RBP3.13□□□□□ -1.91
SRB8YCR081W KDX1P36005 433 aa3.13□□□□□ -1.91
SRB8YCR081W OLA1P38219 394 aaKnown RBP3.13□□□□□ -1.91
SRB8YCR081W RTT106P40161 455 aa3.13□□□□□ -1.91
SRB8YCR081W RSC1P53236 928 aa3.13□□□□□ -1.91
SRB8YCR081W UTP22P53254 1237 aaPredicted RBP3.13□□□□□ -1.91
SRB8YCR081W COG8Q04632 607 aa3.13□□□□□ -1.91
SRB8YCR081W YDR338CQ05497 695 aa3.13□□□□□ -1.91
SRB8YCR081W ATG9Q12142 997 aa3.13□□□□□ -1.91
SRB8YCR081W RTS1P38903 757 aa3.13□□□□□ -1.91
SRB8YCR081W GYP7P48365 746 aa3.13□□□□□ -1.91
SRB8YCR081W NCS2P53923 493 aaPredicted RBP3.13□□□□□ -1.91
SRB8YCR081W YMR102CQ03177 834 aa3.13□□□□□ -1.91
SRB8YCR081W HSM3P38348 480 aa3.12□□□□□ -1.91
SRB8YCR081W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
SRB8YCR081W NOC3Q07896 663 aaPredicted RBP3.12□□□□□ -1.91
SRB8YCR081W SSA1P10591 642 aaKnown RBP3.12□□□□□ -1.91
SRB8YCR081W SSA2P10592 639 aaKnown RBP3.12□□□□□ -1.91
SRB8YCR081W ELM1P32801 640 aa3.12□□□□□ -1.91
SRB8YCR081W UIP5P36137 443 aa3.12□□□□□ -1.91
SRB8YCR081W LEM3P42838 414 aa3.12□□□□□ -1.91
SRB8YCR081W CUS1Q02554 436 aaPredicted RBP3.12□□□□□ -1.91
SRB8YCR081W VTC3Q02725 835 aa3.12□□□□□ -1.91
SRB8YCR081W RNH1Q04740 348 aa3.12□□□□□ -1.91
SRB8YCR081W UBP1P25037 809 aa3.12□□□□□ -1.91
SRB8YCR081W CDC48P25694 835 aaKnown RBP3.12□□□□□ -1.91
SRB8YCR081W RME1P32338 300 aaKnown RBP3.12□□□□□ -1.91
SRB8YCR081W SDS3P40505 327 aa3.12□□□□□ -1.91
SRB8YCR081W UBX2Q04228 584 aa3.12□□□□□ -1.91
SRB8YCR081W HEL2Q05580 639 aaKnown RBP3.12□□□□□ -1.91
SRB8YCR081W SLX4Q12098 748 aa3.12□□□□□ -1.91
SRB8YCR081W YIL177CP40434 1758 aa3.11□□□□□ -1.91
SRB8YCR081W YJL225CP40889 1758 aa3.11□□□□□ -1.91
SRB8YCR081W TUS1Q06412 1307 aa3.11□□□□□ -1.91
SRB8YCR081W HMG1P12683 1054 aa3.11□□□□□ -1.91
SRB8YCR081W VPS1P21576 704 aaKnown RBP3.11□□□□□ -1.91
SRB8YCR081W MRP8P35719 219 aa3.11□□□□□ -1.91
SRB8YCR081W TAF1P46677 1066 aa3.11□□□□□ -1.91
SRB8YCR081W RTF1P53064 558 aa3.11□□□□□ -1.91
SRB8YCR081W MAL13P53338 473 aa3.11□□□□□ -1.91
SRB8YCR081W HST1P53685 503 aa3.11□□□□□ -1.91
SRB8YCR081W JJJ1P53863 590 aa3.11□□□□□ -1.91
SRB8YCR081W DNM1P54861 757 aa3.11□□□□□ -1.91
SRB8YCR081W ITT1Q04638 464 aa3.11□□□□□ -1.91
SRB8YCR081W KEX1P09620 729 aa3.11□□□□□ -1.91
SRB8YCR081W PHO87P25360 923 aa3.11□□□□□ -1.91
SRB8YCR081W MUD2P36084 527 aaKnown RBP3.11□□□□□ -1.91
SRB8YCR081W KIC1P38692 1080 aa3.11□□□□□ -1.91
SRB8YCR081W LIN1P38852 340 aaPredicted RBP3.11□□□□□ -1.91
SRB8YCR081W VPS41P38959 992 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms