Protein–RNA interactions for Protein: P38852

LIN1, Protein LIN1, yeastyeast

Predicted RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LIN1P38852 NSR1YGR159C 1245 nt20.46■□□□□ 0.87
LIN1P38852 YML009W-BYML009W-B 477 nt20.21■□□□□ 0.83
LIN1P38852 NOP1YDL014W 984 nt19.5■□□□□ 0.71
LIN1P38852 MDJ1YFL016C 1536 nt18.53■□□□□ 0.56
LIN1P38852 YKL036CYKL036C 393 nt17.62■□□□□ 0.41
LIN1P38852 YJL027CYJL027C 417 nt17.07■□□□□ 0.32
LIN1P38852 SRX1YKL086W 384 nt17.04■□□□□ 0.32
LIN1P38852 Q0297Q0297 156 nt16.95■□□□□ 0.3
LIN1P38852 DBP2YNL112W 1641 nt16.24■□□□□ 0.19
LIN1P38852 YCR051WYCR051W 669 nt16.12■□□□□ 0.17
LIN1P38852 YBR190WYBR190W 312 nt15.92■□□□□ 0.14
LIN1P38852 SCS3YGL126W 1143 nt15.82■□□□□ 0.12
LIN1P38852 TRN1tP(UGG)A 72 nt15.65■□□□□ 0.1
LIN1P38852 SUF9tP(UGG)F 72 nt15.65■□□□□ 0.1
LIN1P38852 SUF8tP(UGG)H 72 nt15.65■□□□□ 0.1
LIN1P38852 tP(UGG)LtP(UGG)L 72 nt15.65■□□□□ 0.1
LIN1P38852 SUF7tP(UGG)M 72 nt15.65■□□□□ 0.1
LIN1P38852 tP(UGG)N1tP(UGG)N1 72 nt15.65■□□□□ 0.1
LIN1P38852 tP(UGG)N2tP(UGG)N2 72 nt15.65■□□□□ 0.1
LIN1P38852 tP(UGG)O1tP(UGG)O1 72 nt15.65■□□□□ 0.1
LIN1P38852 SUF11tP(UGG)O2 72 nt15.65■□□□□ 0.1
LIN1P38852 SSA3YBL075C 1950 nt15.62■□□□□ 0.09
LIN1P38852 RTC3YHR087W 336 nt15.53■□□□□ 0.08
LIN1P38852 CCC1YLR220W 969 nt15.47■□□□□ 0.07
LIN1P38852 YOL085CYOL085C 342 nt15.27■□□□□ 0.04
LIN1P38852 RPP1BYDL130W 321 nt15.2■□□□□ 0.02
LIN1P38852 RVS167YDR388W 1449 nt15.17■□□□□ 0.02
LIN1P38852 PKP1YIL042C 1185 nt15.08■□□□□ 0
LIN1P38852 SCJ1YMR214W 1134 nt15.02■□□□□ -0
LIN1P38852 PUT4YOR348C 1884 nt14.76□□□□□ -0.05
LIN1P38852 tP(UGG)O3tP(UGG)O3 72 nt14.66□□□□□ -0.06
LIN1P38852 PET122YER153C 765 nt14.57□□□□□ -0.08
LIN1P38852 SHR5YOL110W 714 nt14.56□□□□□ -0.08
LIN1P38852 URN1YPR152C 1398 nt14.39□□□□□ -0.11
LIN1P38852 ARE1YCR048W 1833 nt14.38□□□□□ -0.11
LIN1P38852 SCR1SCR1 522 nt14.3□□□□□ -0.12
LIN1P38852 SAH1YER043C 1350 nt14.28□□□□□ -0.12
LIN1P38852 OPI9YLR338W 858 nt14.28□□□□□ -0.12
LIN1P38852 DEP1YAL013W 1218 nt14.26□□□□□ -0.13
LIN1P38852 POA1YBR022W 534 nt14.26□□□□□ -0.13
LIN1P38852 YDJ1YNL064C 1230 nt14.2□□□□□ -0.14
LIN1P38852 YHR049C-AYHR049C-A 297 nt14.18□□□□□ -0.14
LIN1P38852 RRN5YLR141W 1092 nt14.1□□□□□ -0.15
LIN1P38852 RPN10YHR200W 807 nt14.09□□□□□ -0.15
LIN1P38852 ATS1YAL020C 1002 nt14.04□□□□□ -0.16
LIN1P38852 BSC6YOL137W 1494 nt14.04□□□□□ -0.16
LIN1P38852 YNL208WYNL208W 600 nt14.01□□□□□ -0.17
LIN1P38852 GAR1YHR089C 618 nt13.93□□□□□ -0.18
LIN1P38852 PUN1YLR414C 792 nt13.86□□□□□ -0.19
LIN1P38852 YER088W-BYER088W-B 147 nt13.82□□□□□ -0.2
LIN1P38852 BUD23YCR047C 828 nt13.81□□□□□ -0.2
LIN1P38852 PTC2YER089C 1395 nt13.75□□□□□ -0.21
LIN1P38852 SSA4YER103W 1929 nt13.72□□□□□ -0.21
LIN1P38852 YJR018WYJR018W 363 nt13.71□□□□□ -0.21
LIN1P38852 SPT5YML010W 3192 nt13.7□□□□□ -0.22
LIN1P38852 RSB1YOR049C 1065 nt13.69□□□□□ -0.22
LIN1P38852 NAB2YGL122C 1578 nt13.63□□□□□ -0.23
LIN1P38852 TIR1YER011W 765 nt13.49□□□□□ -0.25
LIN1P38852 YJR120WYJR120W 351 nt13.42□□□□□ -0.26
LIN1P38852 SSA1YAL005C 1929 nt13.41□□□□□ -0.26
LIN1P38852 FIS1YIL065C 468 nt13.41□□□□□ -0.26
LIN1P38852 DAL1YIR027C 1383 nt13.37□□□□□ -0.27
LIN1P38852 RPP2BYDR382W 333 nt13.32□□□□□ -0.28
LIN1P38852 FPR4YLR449W 1179 nt13.32□□□□□ -0.28
LIN1P38852 INM2YDR287W 879 nt13.28□□□□□ -0.28
LIN1P38852 PHO4YFR034C 939 nt13.26□□□□□ -0.29
LIN1P38852 BDF1YLR399C 2061 nt13.24□□□□□ -0.29
LIN1P38852 MEP2YNL142W 1500 nt13.22□□□□□ -0.29
LIN1P38852 YPS1YLR120C 1710 nt13.14□□□□□ -0.31
LIN1P38852 SRB2YHR041C 633 nt13.11□□□□□ -0.31
LIN1P38852 PST2YDR032C 597 nt13.08□□□□□ -0.32
LIN1P38852 YBL100CYBL100C 315 nt13.08□□□□□ -0.32
LIN1P38852 TAT1YBR069C 1860 nt13.06□□□□□ -0.32
LIN1P38852 PAC11YDR488C 1602 nt13.05□□□□□ -0.32
LIN1P38852 YHR165W-AYHR165W-A 312 nt13.01□□□□□ -0.33
LIN1P38852 YDR095CYDR095C 411 nt13□□□□□ -0.33
LIN1P38852 DCW1YKL046C 1350 nt12.99□□□□□ -0.33
LIN1P38852 BDH2YAL061W 1254 nt12.99□□□□□ -0.33
LIN1P38852 FUN26YAL022C 1554 nt12.91□□□□□ -0.34
LIN1P38852 WWM1YFL010C 636 nt12.83□□□□□ -0.36
LIN1P38852 EMI2YDR516C 1503 nt12.83□□□□□ -0.36
LIN1P38852 TRM9YML014W 840 nt12.81□□□□□ -0.36
LIN1P38852 ALF1YNL148C 765 nt12.81□□□□□ -0.36
LIN1P38852 LSM3YLR438C-A 270 nt12.76□□□□□ -0.37
LIN1P38852 YMR090WYMR090W 684 nt12.76□□□□□ -0.37
LIN1P38852 PTP1YDL230W 1008 nt12.75□□□□□ -0.37
LIN1P38852 RPP2AYOL039W 321 nt12.75□□□□□ -0.37
LIN1P38852 YBR220CYBR220C 1683 nt12.72□□□□□ -0.37
LIN1P38852 CCT6YDR188W 1641 nt12.72□□□□□ -0.37
LIN1P38852 CAC2YML102W 1407 nt12.71□□□□□ -0.38
LIN1P38852 YDL221WYDL221W 552 nt12.7□□□□□ -0.38
LIN1P38852 YGR021WYGR021W 873 nt12.64□□□□□ -0.39
LIN1P38852 SIS1YNL007C 1059 nt12.64□□□□□ -0.39
LIN1P38852 YFL021C-AYFL021C-A 855 nt12.63□□□□□ -0.39
LIN1P38852 SUF2tP(AGG)C 72 nt12.63□□□□□ -0.39
LIN1P38852 SUF10tP(AGG)N 72 nt12.63□□□□□ -0.39
LIN1P38852 SHU1YHL006C 453 nt12.63□□□□□ -0.39
LIN1P38852 SDH1YKL148C 1923 nt12.62□□□□□ -0.39
LIN1P38852 NVJ2YPR091C 2313 nt12.61□□□□□ -0.39
LIN1P38852 HOM6YJR139C 1080 nt12.57□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms