RNA–Protein interactions for RNA: YCR081W

SRB8, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB8, Length 4,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB8YCR081W SPA2P23201 1466 aaKnown RBP4.37□□□□□ -1.71
SRB8YCR081W SKI3P17883 1432 aaKnown RBP4.36□□□□□ -1.71
SRB8YCR081W BFR2Q06631 534 aaKnown RBP4.35□□□□□ -1.71
SRB8YCR081W CHD1P32657 1468 aa4.16□□□□□ -1.74
SRB8YCR081W TCB3Q03640 1545 aaKnown RBP4.09□□□□□ -1.75
SRB8YCR081W RQC2Q12532 1038 aaKnown RBP4.08□□□□□ -1.76
SRB8YCR081W URN1Q06525 465 aaKnown RBP4.04□□□□□ -1.76
SRB8YCR081W NOP2P40991 618 aaKnown RBP4.04□□□□□ -1.76
SRB8YCR081W SSN2P38931 1420 aa4.04□□□□□ -1.76
SRB8YCR081W INO80P53115 1489 aa3.98□□□□□ -1.77
SRB8YCR081W NUP170P38181 1502 aa3.97□□□□□ -1.77
SRB8YCR081W EBP2P36049 427 aaKnown RBP3.97□□□□□ -1.77
SRB8YCR081W PEP1P32319 1579 aa3.95□□□□□ -1.78
SRB8YCR081W UFD4P33202 1483 aa3.94□□□□□ -1.78
SRB8YCR081W MON2P48563 1636 aaPredicted RBP3.93□□□□□ -1.78
SRB8YCR081W XRN1P22147 1528 aaKnown RBP3.89□□□□□ -1.79
SRB8YCR081W TAF7Q05021 590 aa3.89□□□□□ -1.79
SRB8YCR081W SIS2P36024 562 aa3.89□□□□□ -1.79
SRB8YCR081W SGS1P35187 1447 aa3.88□□□□□ -1.79
SRB8YCR081W IRC20Q06554 1556 aa3.88□□□□□ -1.79
SRB8YCR081W MLP2P40457 1679 aa3.87□□□□□ -1.79
SRB8YCR081W NSR1P27476 414 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SRB8YCR081W MMS22Q06164 1454 aa3.86□□□□□ -1.79
SRB8YCR081W ECM5Q03214 1411 aa3.86□□□□□ -1.79
SRB8YCR081W CAB3P36076 571 aa3.85□□□□□ -1.79
SRB8YCR081W STH1P32597 1359 aa3.84□□□□□ -1.79
SRB8YCR081W MTC1P47018 478 aaKnown RBP3.84□□□□□ -1.79
SRB8YCR081W SPP41P38904 1435 aa3.82□□□□□ -1.8
SRB8YCR081W FAP1P53971 965 aa3.82□□□□□ -1.8
SRB8YCR081W TFA1P36100 482 aa3.81□□□□□ -1.8
SRB8YCR081W THO2P53552 1597 aaKnown RBP3.79□□□□□ -1.8
SRB8YCR081W SIN3P22579 1536 aa3.79□□□□□ -1.8
SRB8YCR081W RLF2Q12495 606 aa3.77□□□□□ -1.81
SRB8YCR081W TCB2P48231 1178 aa3.75□□□□□ -1.81
SRB8YCR081W ESC1Q03661 1658 aaKnown RBP3.75□□□□□ -1.81
SRB8YCR081W PDR5P33302 1511 aaKnown RBP3.74□□□□□ -1.81
SRB8YCR081W TY1B-DR4Q07793 1604 aa3.73□□□□□ -1.81
SRB8YCR081W YLR419WQ06698 1435 aaKnown RBP3.73□□□□□ -1.81
SRB8YCR081W ENP1P38333 483 aaKnown RBP3.71□□□□□ -1.82
SRB8YCR081W YPK9Q12697 1472 aa3.7□□□□□ -1.82
SRB8YCR081W MYO2P19524 1574 aaKnown RBP3.69□□□□□ -1.82
SRB8YCR081W PDR10P51533 1564 aa3.69□□□□□ -1.82
SRB8YCR081W STU1P38198 1513 aa3.69□□□□□ -1.82
SRB8YCR081W RPS0BP46654 252 aaKnown RBP3.68□□□□□ -1.82
SRB8YCR081W NOP53Q12080 455 aaKnown RBP3.68□□□□□ -1.82
SRB8YCR081W ESP1Q03018 1630 aa3.68□□□□□ -1.82
SRB8YCR081W SRB8P25648 1427 aa3.68□□□□□ -1.82
SRB8YCR081W MYO4P32492 1471 aa3.68□□□□□ -1.82
SRB8YCR081W SSK2P53599 1579 aa3.67□□□□□ -1.82
SRB8YCR081W TRM732Q03496 1420 aa3.66□□□□□ -1.82
SRB8YCR081W GCN2P15442 1659 aa3.66□□□□□ -1.82
SRB8YCR081W YPR148CQ06523 435 aa3.66□□□□□ -1.82
SRB8YCR081W RSE1Q04693 1361 aaKnown RBP3.66□□□□□ -1.82
SRB8YCR081W TOP2P06786 1428 aaKnown RBP3.66□□□□□ -1.82
SRB8YCR081W SMC4Q12267 1418 aa3.65□□□□□ -1.83
SRB8YCR081W YRB30P53107 440 aaPredicted RBP3.65□□□□□ -1.83
SRB8YCR081W SWR1Q05471 1514 aa3.64□□□□□ -1.83
SRB8YCR081W SEC3P33332 1336 aaKnown RBP3.63□□□□□ -1.83
SRB8YCR081W HSL1P34244 1518 aa3.62□□□□□ -1.83
SRB8YCR081W PLP2Q12017 286 aa3.62□□□□□ -1.83
SRB8YCR081W DNA2P38859 1522 aa3.62□□□□□ -1.83
SRB8YCR081W ARO1P08566 1588 aaKnown RBP3.62□□□□□ -1.83
SRB8YCR081W POL1P13382 1468 aa3.61□□□□□ -1.83
SRB8YCR081W QCR6P00127 147 aa3.61□□□□□ -1.83
SRB8YCR081W YFR016CP43597 1233 aaKnown RBP3.61□□□□□ -1.83
SRB8YCR081W SPT6P23615 1451 aaKnown RBP3.61□□□□□ -1.83
SRB8YCR081W IKI3Q06706 1349 aaKnown RBP3.6□□□□□ -1.83
SRB8YCR081W GEA1P47102 1408 aaPredicted RBP3.59□□□□□ -1.83
SRB8YCR081W PRY3P47033 881 aa3.59□□□□□ -1.84
SRB8YCR081W YIR014WP40570 242 aa3.58□□□□□ -1.84
SRB8YCR081W CHZ1P40019 153 aaPredicted RBP3.58□□□□□ -1.84
SRB8YCR081W YTA7P40340 1379 aa3.58□□□□□ -1.84
SRB8YCR081W IME2P32581 645 aa3.57□□□□□ -1.84
SRB8YCR081W NUG1P40010 520 aaKnown RBP3.57□□□□□ -1.84
SRB8YCR081W RIX1P38883 763 aaPredicted RBP3.57□□□□□ -1.84
SRB8YCR081W DRS1P32892 752 aaKnown RBP3.57□□□□□ -1.84
SRB8YCR081W RRP5Q05022 1729 aaKnown RBP3.57□□□□□ -1.84
SRB8YCR081W PRS1P32895 427 aaKnown RBP3.56□□□□□ -1.84
SRB8YCR081W BUD4P47136 1447 aa3.56□□□□□ -1.84
SRB8YCR081W EDE1P34216 1381 aa3.56□□□□□ -1.84
SRB8YCR081W TSC11P40061 1430 aa3.56□□□□□ -1.84
SRB8YCR081W ATG2P53855 1592 aa3.55□□□□□ -1.84
SRB8YCR081W MMS1Q06211 1407 aa3.54□□□□□ -1.84
SRB8YCR081W CLC1P17891 233 aa3.54□□□□□ -1.84
SRB8YCR081W REV3P14284 1504 aa3.54□□□□□ -1.84
SRB8YCR081W OPY1P38271 328 aa3.54□□□□□ -1.84
SRB8YCR081W YGR130CP53278 816 aa3.54□□□□□ -1.84
SRB8YCR081W SNF2P22082 1703 aa3.54□□□□□ -1.84
SRB8YCR081W YCF1P39109 1515 aaKnown RBP3.53□□□□□ -1.84
SRB8YCR081W KOG1P38873 1557 aa3.53□□□□□ -1.84
SRB8YCR081W MNN4P36044 1178 aa3.53□□□□□ -1.84
SRB8YCR081W SPT7P35177 1332 aa3.53□□□□□ -1.84
SRB8YCR081W NUP159P40477 1460 aa3.53□□□□□ -1.84
SRB8YCR081W ULS1Q08562 1619 aa3.53□□□□□ -1.84
SRB8YCR081W YBT1P32386 1661 aa3.52□□□□□ -1.85
SRB8YCR081W HIR3P47171 1648 aa3.52□□□□□ -1.85
SRB8YCR081W VPS4P52917 437 aa3.52□□□□□ -1.85
SRB8YCR081W AIM44Q99299 758 aa3.52□□□□□ -1.85
SRB8YCR081W DIP2Q12220 943 aaPredicted RBP3.51□□□□□ -1.85
SRB8YCR081W SCC2Q04002 1493 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms