RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeastyeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAF1YBR280C TRM44Q02648 567 aaKnown RBP5.94□□□□□ -1.46
SAF1YBR280C SYF1Q04048 859 aaPredicted RBP5.94□□□□□ -1.46
SAF1YBR280C TIF6Q12522 245 aaKnown RBP5.94□□□□□ -1.46
SAF1YBR280C FIG2P25653 1609 aa5.94□□□□□ -1.46
SAF1YBR280C UGA3P26370 528 aa5.93□□□□□ -1.46
SAF1YBR280C APL2P36000 726 aaPredicted RBP5.93□□□□□ -1.46
SAF1YBR280C SRF1Q12516 437 aa5.93□□□□□ -1.46
SAF1YBR280C MAC1P35192 417 aa5.93□□□□□ -1.46
SAF1YBR280C EMP47P43555 445 aa5.93□□□□□ -1.46
SAF1YBR280C CWC15Q03772 175 aaKnown RBP5.93□□□□□ -1.46
SAF1YBR280C HAT1Q12341 374 aa5.93□□□□□ -1.46
SAF1YBR280C HAA1Q12753 694 aaKnown RBP5.93□□□□□ -1.46
SAF1YBR280C VPS4P52917 437 aa5.92□□□□□ -1.46
SAF1YBR280C NSE3Q05541 303 aa5.92□□□□□ -1.46
SAF1YBR280C YPR204WQ08995 1032 aa5.92□□□□□ -1.46
SAF1YBR280C YGR117CP53270 476 aa5.91□□□□□ -1.46
SAF1YBR280C TYW1Q08960 810 aaKnown RBP5.91□□□□□ -1.46
SAF1YBR280C SSK22P25390 1331 aaPredicted RBP5.91□□□□□ -1.46
SAF1YBR280C HPR1P17629 752 aaKnown RBP5.91□□□□□ -1.46
SAF1YBR280C VPS64Q03944 604 aa5.91□□□□□ -1.46
SAF1YBR280C SET4P42948 560 aa5.9□□□□□ -1.46
SAF1YBR280C STV1P37296 890 aa5.89□□□□□ -1.47
SAF1YBR280C TIF4632P39936 914 aaKnown RBP5.89□□□□□ -1.47
SAF1YBR280C PIB1Q06651 286 aa5.89□□□□□ -1.47
SAF1YBR280C HVG1P0CE11 249 aa5.89□□□□□ -1.47
SAF1YBR280C AFG2P32794 780 aa5.89□□□□□ -1.47
SAF1YBR280C BSD2P38356 321 aa5.89□□□□□ -1.47
SAF1YBR280C NCS6P53088 359 aa5.89□□□□□ -1.47
SAF1YBR280C ZDS2P54786 942 aa5.89□□□□□ -1.47
SAF1YBR280C YNL050CP53952 270 aa5.88□□□□□ -1.47
SAF1YBR280C GAS5Q08193 484 aa5.88□□□□□ -1.47
SAF1YBR280C CSR2Q12734 1121 aa5.88□□□□□ -1.47
SAF1YBR280C CRF1Q04930 467 aa5.87□□□□□ -1.47
SAF1YBR280C RRG1Q12167 365 aaPredicted RBP5.87□□□□□ -1.47
SAF1YBR280C NSR1P27476 414 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SAF1YBR280C PNT1P38969 423 aa5.87□□□□□ -1.47
SAF1YBR280C RRP46P53256 223 aaPredicted RBP5.87□□□□□ -1.47
SAF1YBR280C PKH1Q03407 766 aa5.87□□□□□ -1.47
SAF1YBR280C PAM1P37304 830 aaKnown RBP5.86□□□□□ -1.47
SAF1YBR280C SEN54Q02825 467 aaPredicted RBP5.86□□□□□ -1.47
SAF1YBR280C CST9Q06032 482 aa5.86□□□□□ -1.47
SAF1YBR280C LYS2P07702 1392 aa5.86□□□□□ -1.47
SAF1YBR280C HKR1P41809 1802 aa5.86□□□□□ -1.47
SAF1YBR280C KRE2P27809 442 aa5.86□□□□□ -1.47
SAF1YBR280C PCS60P38137 543 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SAF1YBR280C ZDS1P50111 915 aaKnown RBP5.86□□□□□ -1.47
SAF1YBR280C COQ4O13525 335 aa5.85□□□□□ -1.47
SAF1YBR280C TRP5P00931 707 aaKnown RBP5.85□□□□□ -1.47
SAF1YBR280C RRT6P53117 311 aaPredicted RBP5.85□□□□□ -1.47
SAF1YBR280C YLR271WQ06152 274 aa5.85□□□□□ -1.47
SAF1YBR280C CBP1P07252 654 aa5.84□□□□□ -1.47
SAF1YBR280C YKR023WP36119 530 aaKnown RBP5.84□□□□□ -1.47
SAF1YBR280C POL5P39985 1022 aaKnown RBP5.84□□□□□ -1.47
SAF1YBR280C GSM1P42950 618 aa5.84□□□□□ -1.47
SAF1YBR280C FCP1Q03254 732 aa5.84□□□□□ -1.47
SAF1YBR280C BMS1Q08965 1183 aaKnown RBP5.84□□□□□ -1.47
SAF1YBR280C DPH6Q12429 685 aa5.84□□□□□ -1.47
SAF1YBR280C APE3P37302 537 aaKnown RBP5.84□□□□□ -1.48
SAF1YBR280C YBR287WP38355 427 aa5.84□□□□□ -1.48
SAF1YBR280C RSC30P38781 883 aa5.84□□□□□ -1.48
SAF1YBR280C UBX2Q04228 584 aa5.84□□□□□ -1.48
SAF1YBR280C MOT2P34909 587 aaKnown RBP5.83□□□□□ -1.48
SAF1YBR280C ICP55P40051 511 aa5.83□□□□□ -1.48
SAF1YBR280C MAM1P40065 302 aa5.82□□□□□ -1.48
SAF1YBR280C RTR1P40084 226 aaPredicted RBP5.82□□□□□ -1.48
SAF1YBR280C RPT4P53549 437 aaKnown RBP5.82□□□□□ -1.48
SAF1YBR280C FLO11P08640 1367 aa5.82□□□□□ -1.48
SAF1YBR280C PRD1P25375 712 aa5.81□□□□□ -1.48
SAF1YBR280C SPL2P38839 148 aa5.81□□□□□ -1.48
SAF1YBR280C YOL057WQ08225 711 aa5.81□□□□□ -1.48
SAF1YBR280C TSR3Q12094 313 aaKnown RBP5.81□□□□□ -1.48
SAF1YBR280C PRP42Q03776 544 aaKnown RBP5.8□□□□□ -1.48
SAF1YBR280C RBA50Q04418 439 aa5.8□□□□□ -1.48
SAF1YBR280C DNM1P54861 757 aa5.8□□□□□ -1.48
SAF1YBR280C THI3Q07471 609 aa5.8□□□□□ -1.48
SAF1YBR280C ISW2Q08773 1120 aa5.8□□□□□ -1.48
SAF1YBR280C MGM1P32266 881 aa5.79□□□□□ -1.48
SAF1YBR280C MAL31P38156 614 aa5.79□□□□□ -1.48
SAF1YBR280C SWI1P09547 1314 aa5.79□□□□□ -1.48
SAF1YBR280C RPS7AP26786 190 aaKnown RBP5.78□□□□□ -1.48
SAF1YBR280C NGR1P32831 672 aaKnown RBP5.78□□□□□ -1.48
SAF1YBR280C TOS4Q06266 489 aa5.78□□□□□ -1.48
SAF1YBR280C UTP7P40055 554 aaKnown RBP5.78□□□□□ -1.48
SAF1YBR280C CST6P40535 587 aa5.78□□□□□ -1.48
SAF1YBR280C MTC3P53077 123 aa5.78□□□□□ -1.48
SAF1YBR280C JIP4Q03361 876 aa5.78□□□□□ -1.48
SAF1YBR280C SGD1Q06132 899 aa5.78□□□□□ -1.48
SAF1YBR280C VPS13Q07878 3144 aa5.77□□□□□ -1.49
SAF1YBR280C ASH1P34233 588 aa5.77□□□□□ -1.49
SAF1YBR280C GYP7P48365 746 aa5.77□□□□□ -1.49
SAF1YBR280C IRC4Q03036 179 aa5.77□□□□□ -1.49
SAF1YBR280C ARG82P07250 355 aa5.76□□□□□ -1.49
SAF1YBR280C GAL2P13181 574 aa5.76□□□□□ -1.49
SAF1YBR280C NUP133P36161 1157 aa5.76□□□□□ -1.49
SAF1YBR280C NIT1P40447 199 aa5.76□□□□□ -1.49
SAF1YBR280C ITC1P53125 1264 aa5.76□□□□□ -1.49
SAF1YBR280C THI22Q06490 572 aa5.76□□□□□ -1.49
SAF1YBR280C LCB1P25045 558 aaKnown RBP5.76□□□□□ -1.49
SAF1YBR280C RTT109Q07794 436 aa5.76□□□□□ -1.49
SAF1YBR280C SAC3P46674 1301 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms