RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C THP1Q08231 455 aa2.26□□□□□ -2.05
SGS1YMR190C RPP1BP10622 106 aaKnown RBP2.26□□□□□ -2.05
SGS1YMR190C TRX3P25372 127 aa2.26□□□□□ -2.05
SGS1YMR190C SUI1P32911 108 aaKnown RBP2.26□□□□□ -2.05
SGS1YMR190C SDH3P33421 198 aa2.26□□□□□ -2.05
SGS1YMR190C FMP52P40008 231 aa2.26□□□□□ -2.05
SGS1YMR190C PRM10P42946 383 aa2.26□□□□□ -2.05
SGS1YMR190C MEP3P53390 489 aa2.26□□□□□ -2.05
SGS1YMR190C YNL181WP53878 407 aa2.26□□□□□ -2.05
SGS1YMR190C SRL4Q03085 281 aa2.26□□□□□ -2.05
SGS1YMR190C CTK1Q03957 528 aaKnown RBP2.26□□□□□ -2.05
SGS1YMR190C YDL114WQ07530 308 aa2.26□□□□□ -2.05
SGS1YMR190C YPL191CQ08930 360 aa2.26□□□□□ -2.05
SGS1YMR190C ULA1Q12059 462 aa2.26□□□□□ -2.05
SGS1YMR190C YLR108CQ12259 485 aa2.26□□□□□ -2.05
SGS1YMR190C PEP4P07267 405 aaKnown RBP2.26□□□□□ -2.05
SGS1YMR190C SAM35P14693 329 aa2.26□□□□□ -2.05
SGS1YMR190C VMA6P32366 345 aaKnown RBP2.26□□□□□ -2.05
SGS1YMR190C ATP11P32453 318 aa2.26□□□□□ -2.05
SGS1YMR190C MTC7P32633 139 aa2.26□□□□□ -2.05
SGS1YMR190C MGM101P32787 269 aaKnown RBP2.26□□□□□ -2.05
SGS1YMR190C AMN1P38285 549 aaPredicted RBP2.26□□□□□ -2.05
SGS1YMR190C SWD1P39706 426 aa2.26□□□□□ -2.05
SGS1YMR190C KRE29P40026 464 aa2.26□□□□□ -2.05
SGS1YMR190C AVT6P40074 448 aa2.26□□□□□ -2.05
SGS1YMR190C YRB1P41920 201 aaKnown RBP2.26□□□□□ -2.05
SGS1YMR190C COG5P53951 403 aa2.26□□□□□ -2.05
SGS1YMR190C TMA20P89886 181 aaPredicted RBP2.26□□□□□ -2.05
SGS1YMR190C RRN5Q02983 363 aa2.26□□□□□ -2.05
SGS1YMR190C SDC1Q03323 175 aa2.26□□□□□ -2.05
SGS1YMR190C RRP17Q04031 235 aaPredicted RBP2.26□□□□□ -2.05
SGS1YMR190C GAL83Q04739 417 aa2.26□□□□□ -2.05
SGS1YMR190C AIM6Q07716 390 aa2.26□□□□□ -2.05
SGS1YMR190C PFA4Q12006 378 aa2.26□□□□□ -2.05
SGS1YMR190C RPN5Q12250 445 aaKnown RBP2.26□□□□□ -2.05
SGS1YMR190C YPR011CQ12251 326 aa2.26□□□□□ -2.05
SGS1YMR190C APC2Q12440 853 aa2.26□□□□□ -2.05
SGS1YMR190C THP2O13539 261 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C RPS17AP02407 136 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C PUT2P07275 575 aa2.25□□□□□ -2.05
SGS1YMR190C RPS17BP14127 136 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C RPD3P32561 433 aa2.25□□□□□ -2.05
SGS1YMR190C SPC29P33419 253 aa2.25□□□□□ -2.05
SGS1YMR190C YER010CP40011 234 aa2.25□□□□□ -2.05
SGS1YMR190C GCN20P43535 752 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C BIO3P50277 480 aa2.25□□□□□ -2.05
SGS1YMR190C YKR005CQ02203 525 aa2.25□□□□□ -2.05
SGS1YMR190C PLB2Q03674 706 aa2.25□□□□□ -2.05
SGS1YMR190C ARO10Q06408 635 aa2.25□□□□□ -2.05
SGS1YMR190C LOT6Q07923 191 aa2.25□□□□□ -2.05
SGS1YMR190C YNG1Q08465 219 aa2.25□□□□□ -2.05
SGS1YMR190C NCE102Q12207 173 aaRIP-Chip data2.25□□□□□ -2.05not detected
SGS1YMR190C TRM10Q12400 293 aa2.25□□□□□ -2.05
SGS1YMR190C FSH3Q99369 266 aa2.25□□□□□ -2.05
SGS1YMR190C CYR1P08678 2026 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C HNM1P19807 563 aa2.25□□□□□ -2.05
SGS1YMR190C SLY41P22215 453 aa2.25□□□□□ -2.05
SGS1YMR190C IDH1P28834 360 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
SGS1YMR190C PTH2P34222 208 aa2.25□□□□□ -2.05
SGS1YMR190C TMA19P35691 167 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C MAE1P36013 669 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C ARF3P40994 183 aaRIP-Chip data2.25□□□□□ -2.05 RIP-Chip
SGS1YMR190C ATG21Q02887 496 aa2.25□□□□□ -2.05
SGS1YMR190C TLG1Q03322 224 aa2.25□□□□□ -2.05
SGS1YMR190C ATG17Q06410 417 aa2.25□□□□□ -2.05
SGS1YMR190C RRP40Q08285 240 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C NIP7Q08962 181 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C YPR022CQ12139 1133 aa2.25□□□□□ -2.05
SGS1YMR190C RPN6Q12377 434 aa2.25□□□□□ -2.05
SGS1YMR190C RAX2Q12465 1220 aa2.25□□□□□ -2.05
SGS1YMR190C POL2P21951 2222 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C RPS1BP23248 255 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C SEC17P32602 292 aa2.25□□□□□ -2.05
SGS1YMR190C YBR144CP34215 104 aa2.25□□□□□ -2.05
SGS1YMR190C UTP11P34247 250 aaPredicted RBP2.25□□□□□ -2.05
SGS1YMR190C SCO2P38072 301 aa2.25□□□□□ -2.05
SGS1YMR190C GRE3P38715 327 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
SGS1YMR190C DLD3P39976 496 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C ISC1P40015 477 aaKnown RBP2.25□□□□□ -2.05
SGS1YMR190C YRB2P40517 327 aa2.25□□□□□ -2.05
SGS1YMR190C YJL055WP47044 245 aa2.25□□□□□ -2.05
SGS1YMR190C YPR196WQ06595 470 aa2.25□□□□□ -2.05
SGS1YMR190C YDL199CQ12407 687 aa2.25□□□□□ -2.05
SGS1YMR190C MED11Q99278 115 aa2.25□□□□□ -2.05
SGS1YMR190C TDH2P00358 332 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C TDH3P00359 332 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
SGS1YMR190C RPP1AP05318 106 aaPredicted RBP2.24□□□□□ -2.05
SGS1YMR190C MSI1P13712 422 aa2.24□□□□□ -2.05
SGS1YMR190C RAD51P25454 400 aa2.24□□□□□ -2.05
SGS1YMR190C EHD3P28817 500 aa2.24□□□□□ -2.05
SGS1YMR190C PRE4P30657 266 aa2.24□□□□□ -2.05
SGS1YMR190C COS111P38308 924 aa2.24□□□□□ -2.05
SGS1YMR190C IPT1P38954 527 aa2.24□□□□□ -2.05
SGS1YMR190C RCY1P39531 840 aa2.24□□□□□ -2.05
SGS1YMR190C YFR035CP43608 114 aa2.24□□□□□ -2.05
SGS1YMR190C ACS2P52910 683 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C YIP1P53039 248 aa2.24□□□□□ -2.05
SGS1YMR190C UFD1P53044 361 aa2.24□□□□□ -2.05
SGS1YMR190C YNR064CP53750 290 aa2.24□□□□□ -2.05
SGS1YMR190C RSN1Q03516 953 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms