Protein–RNA interactions for Protein: Q04031

RRP17, Ribosomal RNA-processing protein 17, yeastyeast

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP17Q04031 NSR1YGR159C 1245 nt18.23■□□□□ 0.51
RRP17Q04031 YML009W-BYML009W-B 477 nt17.87■□□□□ 0.45
RRP17Q04031 NOP1YDL014W 984 nt17.07■□□□□ 0.32
RRP17Q04031 MDJ1YFL016C 1536 nt16.86■□□□□ 0.29
RRP17Q04031 YJL027CYJL027C 417 nt15.5■□□□□ 0.07
RRP17Q04031 YKL036CYKL036C 393 nt15.25■□□□□ 0.03
RRP17Q04031 SRX1YKL086W 384 nt14.87□□□□□ -0.03
RRP17Q04031 Q0297Q0297 156 nt14.67□□□□□ -0.06
RRP17Q04031 DBP2YNL112W 1641 nt14.59□□□□□ -0.07
RRP17Q04031 YBR190WYBR190W 312 nt14.49□□□□□ -0.09
RRP17Q04031 SSA3YBL075C 1950 nt14.31□□□□□ -0.12
RRP17Q04031 RTC3YHR087W 336 nt14.23□□□□□ -0.13
RRP17Q04031 YCR051WYCR051W 669 nt14.14□□□□□ -0.15
RRP17Q04031 TRN1tP(UGG)A 72 nt13.84□□□□□ -0.19
RRP17Q04031 SUF9tP(UGG)F 72 nt13.84□□□□□ -0.19
RRP17Q04031 SUF8tP(UGG)H 72 nt13.84□□□□□ -0.19
RRP17Q04031 tP(UGG)LtP(UGG)L 72 nt13.84□□□□□ -0.19
RRP17Q04031 SUF7tP(UGG)M 72 nt13.84□□□□□ -0.19
RRP17Q04031 tP(UGG)N1tP(UGG)N1 72 nt13.84□□□□□ -0.19
RRP17Q04031 tP(UGG)N2tP(UGG)N2 72 nt13.84□□□□□ -0.19
RRP17Q04031 tP(UGG)O1tP(UGG)O1 72 nt13.84□□□□□ -0.19
RRP17Q04031 SUF11tP(UGG)O2 72 nt13.84□□□□□ -0.19
RRP17Q04031 CCC1YLR220W 969 nt13.78□□□□□ -0.2
RRP17Q04031 SCS3YGL126W 1143 nt13.71□□□□□ -0.21
RRP17Q04031 PUT4YOR348C 1884 nt13.65□□□□□ -0.22
RRP17Q04031 RVS167YDR388W 1449 nt13.64□□□□□ -0.23
RRP17Q04031 SCJ1YMR214W 1134 nt13.41□□□□□ -0.26
RRP17Q04031 POA1YBR022W 534 nt13.22□□□□□ -0.29
RRP17Q04031 ARE1YCR048W 1833 nt13.21□□□□□ -0.29
RRP17Q04031 RPP1BYDL130W 321 nt13.19□□□□□ -0.3
RRP17Q04031 YOL085CYOL085C 342 nt13.18□□□□□ -0.3
RRP17Q04031 YHR049C-AYHR049C-A 297 nt13.1□□□□□ -0.31
RRP17Q04031 SAH1YER043C 1350 nt13.07□□□□□ -0.32
RRP17Q04031 PKP1YIL042C 1185 nt13.06□□□□□ -0.32
RRP17Q04031 BSC6YOL137W 1494 nt13.04□□□□□ -0.32
RRP17Q04031 URN1YPR152C 1398 nt13.04□□□□□ -0.32
RRP17Q04031 SHR5YOL110W 714 nt12.98□□□□□ -0.33
RRP17Q04031 OPI9YLR338W 858 nt12.93□□□□□ -0.34
RRP17Q04031 tP(UGG)O3tP(UGG)O3 72 nt12.89□□□□□ -0.35
RRP17Q04031 DEP1YAL013W 1218 nt12.89□□□□□ -0.35
RRP17Q04031 SPT5YML010W 3192 nt12.79□□□□□ -0.36
RRP17Q04031 BUD23YCR047C 828 nt12.78□□□□□ -0.36
RRP17Q04031 SSA4YER103W 1929 nt12.74□□□□□ -0.37
RRP17Q04031 PET122YER153C 765 nt12.71□□□□□ -0.37
RRP17Q04031 RPN10YHR200W 807 nt12.7□□□□□ -0.38
RRP17Q04031 PUN1YLR414C 792 nt12.58□□□□□ -0.4
RRP17Q04031 YNL208WYNL208W 600 nt12.57□□□□□ -0.4
RRP17Q04031 PTC2YER089C 1395 nt12.56□□□□□ -0.4
RRP17Q04031 NAB2YGL122C 1578 nt12.46□□□□□ -0.42
RRP17Q04031 YDJ1YNL064C 1230 nt12.44□□□□□ -0.42
RRP17Q04031 SCR1SCR1 522 nt12.41□□□□□ -0.42
RRP17Q04031 YJR018WYJR018W 363 nt12.38□□□□□ -0.43
RRP17Q04031 GAR1YHR089C 618 nt12.35□□□□□ -0.43
RRP17Q04031 MEP2YNL142W 1500 nt12.28□□□□□ -0.44
RRP17Q04031 BDF1YLR399C 2061 nt12.27□□□□□ -0.45
RRP17Q04031 RRN5YLR141W 1092 nt12.27□□□□□ -0.45
RRP17Q04031 FPR4YLR449W 1179 nt12.23□□□□□ -0.45
RRP17Q04031 FIS1YIL065C 468 nt12.22□□□□□ -0.45
RRP17Q04031 ATS1YAL020C 1002 nt12.2□□□□□ -0.46
RRP17Q04031 DAL1YIR027C 1383 nt12.18□□□□□ -0.46
RRP17Q04031 DCW1YKL046C 1350 nt12.1□□□□□ -0.47
RRP17Q04031 TAT1YBR069C 1860 nt12.1□□□□□ -0.47
RRP17Q04031 SSA1YAL005C 1929 nt12.09□□□□□ -0.47
RRP17Q04031 PHO4YFR034C 939 nt12.08□□□□□ -0.48
RRP17Q04031 YJL225CYJL225C 5277 nt12.07□□□□□ -0.48
RRP17Q04031 YPS1YLR120C 1710 nt12.04□□□□□ -0.48
RRP17Q04031 FPS1YLL043W 2010 nt12.04□□□□□ -0.48
RRP17Q04031 YER088W-BYER088W-B 147 nt12.02□□□□□ -0.49
RRP17Q04031 YHR165W-AYHR165W-A 312 nt12.02□□□□□ -0.49
RRP17Q04031 YJR120WYJR120W 351 nt12.02□□□□□ -0.49
RRP17Q04031 INM2YDR287W 879 nt12□□□□□ -0.49
RRP17Q04031 RPP2BYDR382W 333 nt11.99□□□□□ -0.49
RRP17Q04031 PAC11YDR488C 1602 nt11.98□□□□□ -0.49
RRP17Q04031 NVJ2YPR091C 2313 nt11.96□□□□□ -0.49
RRP17Q04031 TIR1YER011W 765 nt11.93□□□□□ -0.5
RRP17Q04031 EMI2YDR516C 1503 nt11.92□□□□□ -0.5
RRP17Q04031 YMR090WYMR090W 684 nt11.9□□□□□ -0.5
RRP17Q04031 YBR220CYBR220C 1683 nt11.88□□□□□ -0.51
RRP17Q04031 RSB1YOR049C 1065 nt11.87□□□□□ -0.51
RRP17Q04031 YDR095CYDR095C 411 nt11.86□□□□□ -0.51
RRP17Q04031 YBL100CYBL100C 315 nt11.82□□□□□ -0.52
RRP17Q04031 YDL221WYDL221W 552 nt11.77□□□□□ -0.53
RRP17Q04031 RDN37-1RDN37-1 5354 nt11.76□□□□□ -0.53
RRP17Q04031 RDN37-2RDN37-2 5354 nt11.76□□□□□ -0.53
RRP17Q04031 SDH1YKL148C 1923 nt11.74□□□□□ -0.53
RRP17Q04031 CAC2YML102W 1407 nt11.69□□□□□ -0.54
RRP17Q04031 ALF1YNL148C 765 nt11.67□□□□□ -0.54
RRP17Q04031 RPP2AYOL039W 321 nt11.65□□□□□ -0.54
RRP17Q04031 FUN26YAL022C 1554 nt11.65□□□□□ -0.54
RRP17Q04031 PTP1YDL230W 1008 nt11.64□□□□□ -0.55
RRP17Q04031 PCH2YBR186W 1695 nt11.6□□□□□ -0.55
RRP17Q04031 SRB2YHR041C 633 nt11.59□□□□□ -0.55
RRP17Q04031 BDH2YAL061W 1254 nt11.59□□□□□ -0.55
RRP17Q04031 SCC4YER147C 1875 nt11.59□□□□□ -0.55
RRP17Q04031 SEC11YIR022W 504 nt11.55□□□□□ -0.56
RRP17Q04031 GUT2YIL155C 1950 nt11.55□□□□□ -0.56
RRP17Q04031 TRM9YML014W 840 nt11.52□□□□□ -0.57
RRP17Q04031 IRC15YPL017C 1500 nt11.51□□□□□ -0.57
RRP17Q04031 GIS3YLR094C 1509 nt11.47□□□□□ -0.57
RRP17Q04031 SIS1YNL007C 1059 nt11.41□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms