Protein–RNA interactions for Protein: P32366

VMA6, V-type proton ATPase subunit d, yeastyeast

Known RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA6P32366 NSR1YGR159C 1245 nt18.5■□□□□ 0.55
VMA6P32366 YML009W-BYML009W-B 477 nt18.1■□□□□ 0.49
VMA6P32366 NOP1YDL014W 984 nt17.32■□□□□ 0.36
VMA6P32366 MDJ1YFL016C 1536 nt17.06■□□□□ 0.32
VMA6P32366 YJL027CYJL027C 417 nt15.69■□□□□ 0.1
VMA6P32366 YKL036CYKL036C 393 nt15.37■□□□□ 0.05
VMA6P32366 SRX1YKL086W 384 nt15.1■□□□□ 0.01
VMA6P32366 Q0297Q0297 156 nt14.91□□□□□ -0.02
VMA6P32366 DBP2YNL112W 1641 nt14.8□□□□□ -0.04
VMA6P32366 YBR190WYBR190W 312 nt14.7□□□□□ -0.06
VMA6P32366 SSA3YBL075C 1950 nt14.49□□□□□ -0.09
VMA6P32366 RTC3YHR087W 336 nt14.39□□□□□ -0.11
VMA6P32366 YCR051WYCR051W 669 nt14.33□□□□□ -0.12
VMA6P32366 TRN1tP(UGG)A 72 nt14.04□□□□□ -0.16
VMA6P32366 SUF9tP(UGG)F 72 nt14.04□□□□□ -0.16
VMA6P32366 SUF8tP(UGG)H 72 nt14.04□□□□□ -0.16
VMA6P32366 tP(UGG)LtP(UGG)L 72 nt14.04□□□□□ -0.16
VMA6P32366 SUF7tP(UGG)M 72 nt14.04□□□□□ -0.16
VMA6P32366 tP(UGG)N1tP(UGG)N1 72 nt14.04□□□□□ -0.16
VMA6P32366 tP(UGG)N2tP(UGG)N2 72 nt14.04□□□□□ -0.16
VMA6P32366 tP(UGG)O1tP(UGG)O1 72 nt14.04□□□□□ -0.16
VMA6P32366 SUF11tP(UGG)O2 72 nt14.04□□□□□ -0.16
VMA6P32366 CCC1YLR220W 969 nt13.93□□□□□ -0.18
VMA6P32366 PUT4YOR348C 1884 nt13.83□□□□□ -0.2
VMA6P32366 RVS167YDR388W 1449 nt13.82□□□□□ -0.2
VMA6P32366 SCS3YGL126W 1143 nt13.65□□□□□ -0.22
VMA6P32366 SCJ1YMR214W 1134 nt13.58□□□□□ -0.24
VMA6P32366 ARE1YCR048W 1833 nt13.39□□□□□ -0.27
VMA6P32366 RPP1BYDL130W 321 nt13.39□□□□□ -0.27
VMA6P32366 POA1YBR022W 534 nt13.37□□□□□ -0.27
VMA6P32366 YOL085CYOL085C 342 nt13.32□□□□□ -0.28
VMA6P32366 YHR049C-AYHR049C-A 297 nt13.25□□□□□ -0.29
VMA6P32366 SAH1YER043C 1350 nt13.22□□□□□ -0.29
VMA6P32366 PKP1YIL042C 1185 nt13.22□□□□□ -0.29
VMA6P32366 URN1YPR152C 1398 nt13.2□□□□□ -0.3
VMA6P32366 BSC6YOL137W 1494 nt13.2□□□□□ -0.3
VMA6P32366 SHR5YOL110W 714 nt13.16□□□□□ -0.3
VMA6P32366 OPI9YLR338W 858 nt13.13□□□□□ -0.31
VMA6P32366 tP(UGG)O3tP(UGG)O3 72 nt13.08□□□□□ -0.32
VMA6P32366 DEP1YAL013W 1218 nt13.03□□□□□ -0.32
VMA6P32366 SPT5YML010W 3192 nt13□□□□□ -0.33
VMA6P32366 BUD23YCR047C 828 nt12.92□□□□□ -0.34
VMA6P32366 SSA4YER103W 1929 nt12.9□□□□□ -0.34
VMA6P32366 PET122YER153C 765 nt12.88□□□□□ -0.35
VMA6P32366 RPN10YHR200W 807 nt12.88□□□□□ -0.35
VMA6P32366 PUN1YLR414C 792 nt12.76□□□□□ -0.37
VMA6P32366 YNL208WYNL208W 600 nt12.74□□□□□ -0.37
VMA6P32366 PTC2YER089C 1395 nt12.71□□□□□ -0.37
VMA6P32366 YDJ1YNL064C 1230 nt12.64□□□□□ -0.39
VMA6P32366 NAB2YGL122C 1578 nt12.63□□□□□ -0.39
VMA6P32366 SCR1SCR1 522 nt12.59□□□□□ -0.39
VMA6P32366 YJR018WYJR018W 363 nt12.55□□□□□ -0.4
VMA6P32366 GAR1YHR089C 618 nt12.5□□□□□ -0.41
VMA6P32366 MEP2YNL142W 1500 nt12.45□□□□□ -0.42
VMA6P32366 BDF1YLR399C 2061 nt12.45□□□□□ -0.42
VMA6P32366 RRN5YLR141W 1092 nt12.44□□□□□ -0.42
VMA6P32366 FIS1YIL065C 468 nt12.37□□□□□ -0.43
VMA6P32366 DAL1YIR027C 1383 nt12.34□□□□□ -0.43
VMA6P32366 FPR4YLR449W 1179 nt12.34□□□□□ -0.43
VMA6P32366 TAT1YBR069C 1860 nt12.27□□□□□ -0.45
VMA6P32366 DCW1YKL046C 1350 nt12.24□□□□□ -0.45
VMA6P32366 PHO4YFR034C 939 nt12.23□□□□□ -0.45
VMA6P32366 YPS1YLR120C 1710 nt12.21□□□□□ -0.45
VMA6P32366 YER088W-BYER088W-B 147 nt12.19□□□□□ -0.46
VMA6P32366 INM2YDR287W 879 nt12.18□□□□□ -0.46
VMA6P32366 YJR120WYJR120W 351 nt12.17□□□□□ -0.46
VMA6P32366 RPP2BYDR382W 333 nt12.15□□□□□ -0.46
VMA6P32366 YHR165W-AYHR165W-A 312 nt12.15□□□□□ -0.46
VMA6P32366 ATS1YAL020C 1002 nt12.13□□□□□ -0.47
VMA6P32366 TIR1YER011W 765 nt12.09□□□□□ -0.47
VMA6P32366 EMI2YDR516C 1503 nt12.07□□□□□ -0.48
VMA6P32366 YMR090WYMR090W 684 nt12.07□□□□□ -0.48
VMA6P32366 SSA1YAL005C 1929 nt12.07□□□□□ -0.48
VMA6P32366 YBR220CYBR220C 1683 nt12.04□□□□□ -0.48
VMA6P32366 YDR095CYDR095C 411 nt12.02□□□□□ -0.49
VMA6P32366 RSB1YOR049C 1065 nt12.02□□□□□ -0.49
VMA6P32366 PAC11YDR488C 1602 nt11.99□□□□□ -0.49
VMA6P32366 YBL100CYBL100C 315 nt11.97□□□□□ -0.49
VMA6P32366 YDL221WYDL221W 552 nt11.92□□□□□ -0.5
VMA6P32366 SDH1YKL148C 1923 nt11.9□□□□□ -0.51
VMA6P32366 CAC2YML102W 1407 nt11.84□□□□□ -0.51
VMA6P32366 RPP2AYOL039W 321 nt11.81□□□□□ -0.52
VMA6P32366 FUN26YAL022C 1554 nt11.8□□□□□ -0.52
VMA6P32366 PTP1YDL230W 1008 nt11.8□□□□□ -0.52
VMA6P32366 ALF1YNL148C 765 nt11.8□□□□□ -0.52
VMA6P32366 NVJ2YPR091C 2313 nt11.78□□□□□ -0.52
VMA6P32366 BDH2YAL061W 1254 nt11.77□□□□□ -0.53
VMA6P32366 PCH2YBR186W 1695 nt11.75□□□□□ -0.53
VMA6P32366 SCC4YER147C 1875 nt11.74□□□□□ -0.53
VMA6P32366 SRB2YHR041C 633 nt11.72□□□□□ -0.53
VMA6P32366 SEC11YIR022W 504 nt11.72□□□□□ -0.53
VMA6P32366 GUT2YIL155C 1950 nt11.7□□□□□ -0.54
VMA6P32366 FPS1YLL043W 2010 nt11.69□□□□□ -0.54
VMA6P32366 TRM9YML014W 840 nt11.67□□□□□ -0.54
VMA6P32366 IRC15YPL017C 1500 nt11.65□□□□□ -0.54
VMA6P32366 GIS3YLR094C 1509 nt11.6□□□□□ -0.55
VMA6P32366 SIS1YNL007C 1059 nt11.58□□□□□ -0.56
VMA6P32366 CCT6YDR188W 1641 nt11.57□□□□□ -0.56
VMA6P32366 YSC84YHR016C 1407 nt11.55□□□□□ -0.56
VMA6P32366 SUF2tP(AGG)C 72 nt11.55□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms