RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W SOV1Q04748 898 aa2.75□□□□□ -1.97
TRA1YHR099W NOP12Q08208 459 aaKnown RBP2.75□□□□□ -1.97
TRA1YHR099W HIS4P00815 799 aaKnown RBP2.75□□□□□ -1.97
TRA1YHR099W TY1B-AO13527 1196 aaKnown RBP2.75□□□□□ -1.97
TRA1YHR099W MRPL25P23369 157 aa2.75□□□□□ -1.97
TRA1YHR099W YIR014WP40570 242 aa2.75□□□□□ -1.97
TRA1YHR099W RUP1Q12242 671 aa2.75□□□□□ -1.97
TRA1YHR099W RPC19P28000 142 aaKnown RBP2.75□□□□□ -1.97
TRA1YHR099W DSN1P40568 576 aa2.75□□□□□ -1.97
TRA1YHR099W DAL5P15365 543 aa2.75□□□□□ -1.97
TRA1YHR099W RIA1P53893 1110 aa2.75□□□□□ -1.97
TRA1YHR099W IOC4Q04213 475 aa2.75□□□□□ -1.97
TRA1YHR099W SNU66Q12420 587 aaPredicted RBP2.75□□□□□ -1.97
TRA1YHR099W RRP5Q05022 1729 aaKnown RBP2.75□□□□□ -1.97
TRA1YHR099W THO2P53552 1597 aaKnown RBP2.75□□□□□ -1.97
TRA1YHR099W SAP185P40856 1058 aa2.75□□□□□ -1.97
TRA1YHR099W ALE1Q08548 619 aa2.75□□□□□ -1.97
TRA1YHR099W YEL043WP32618 956 aa2.75□□□□□ -1.97
TRA1YHR099W GDT1P38301 280 aaPredicted RBP2.75□□□□□ -1.97
TRA1YHR099W YNL181WP53878 407 aa2.75□□□□□ -1.97
TRA1YHR099W YCS4Q06156 1176 aa2.74□□□□□ -1.97
TRA1YHR099W ARP7Q12406 477 aa2.74□□□□□ -1.97
TRA1YHR099W RKM4Q12504 494 aa2.74□□□□□ -1.97
TRA1YHR099W SBP1P10080 294 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W SWD1P39706 426 aa2.74□□□□□ -1.97
TRA1YHR099W RPS0AP32905 252 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W RNT1Q02555 471 aa2.74□□□□□ -1.97
TRA1YHR099W YLH47Q06493 454 aa2.74□□□□□ -1.97
TRA1YHR099W DEP1P31385 405 aa2.74□□□□□ -1.97
TRA1YHR099W SAP1P39955 897 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W YML082WQ04533 649 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W GCD11P32481 527 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W YKL023WP36103 277 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W RSC8P43609 557 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W TY4A-JP47023 414 aa2.74□□□□□ -1.97
TRA1YHR099W LSP1Q12230 341 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W SSA4P22202 642 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W SRO9P25567 434 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W STE11P23561 717 aa2.74□□□□□ -1.97
TRA1YHR099W DNM1P54861 757 aa2.74□□□□□ -1.97
TRA1YHR099W TFB3Q03290 321 aa2.74□□□□□ -1.97
TRA1YHR099W NOP14Q99207 810 aaKnown RBP2.74□□□□□ -1.97
TRA1YHR099W TRZ1P36159 838 aaPredicted RBP2.74□□□□□ -1.97
TRA1YHR099W SPR3P41901 512 aa2.74□□□□□ -1.97
TRA1YHR099W RPN2P32565 945 aaKnown RBP2.73□□□□□ -1.97
TRA1YHR099W YAR1P46683 200 aa2.73□□□□□ -1.97
TRA1YHR099W SPC24Q04477 213 aa2.73□□□□□ -1.97
TRA1YHR099W BUD21Q08492 214 aaPredicted RBP2.73□□□□□ -1.97
TRA1YHR099W SLK19Q08581 821 aaKnown RBP2.73□□□□□ -1.97
TRA1YHR099W CEX1Q12453 761 aa2.73□□□□□ -1.97
TRA1YHR099W NIP1P32497 812 aaKnown RBP2.73□□□□□ -1.97
TRA1YHR099W HOP2P53187 214 aa2.73□□□□□ -1.97
TRA1YHR099W MMS22Q06164 1454 aa2.73□□□□□ -1.97
TRA1YHR099W RPP1AP05318 106 aaPredicted RBP2.73□□□□□ -1.97
TRA1YHR099W MAK11P20484 414 aaKnown RBP2.73□□□□□ -1.97
TRA1YHR099W ESL2P36168 1195 aa2.73□□□□□ -1.97
TRA1YHR099W KEL3Q08979 651 aaPredicted RBP2.73□□□□□ -1.97
TRA1YHR099W GIN4Q12263 1142 aa2.73□□□□□ -1.97
TRA1YHR099W SWC4P53201 476 aa2.73□□□□□ -1.97
TRA1YHR099W NDC80P40460 691 aa2.73□□□□□ -1.97
TRA1YHR099W SPT7P35177 1332 aa2.73□□□□□ -1.97
TRA1YHR099W SHQ1P40486 507 aaPredicted RBP2.73□□□□□ -1.97
TRA1YHR099W MAD1P40957 749 aa2.73□□□□□ -1.97
TRA1YHR099W TOM70P07213 617 aaKnown RBP2.73□□□□□ -1.97
TRA1YHR099W LSG1P53145 640 aaKnown RBP2.73□□□□□ -1.97
TRA1YHR099W PEX19Q07418 342 aa2.73□□□□□ -1.97
TRA1YHR099W REB1P21538 810 aa2.72□□□□□ -1.97
TRA1YHR099W YJU2P28320 278 aaPredicted RBP2.72□□□□□ -1.97
TRA1YHR099W SET1P38827 1080 aaKnown RBP2.72□□□□□ -1.97
TRA1YHR099W ASE1P50275 885 aa2.72□□□□□ -1.97
TRA1YHR099W STH1P32597 1359 aa2.72□□□□□ -1.97
TRA1YHR099W SPC34P36131 295 aa2.72□□□□□ -1.97
TRA1YHR099W ESP1Q03018 1630 aa2.72□□□□□ -1.97
TRA1YHR099W SEM1O94742 89 aa2.72□□□□□ -1.97
TRA1YHR099W RAD54P32863 898 aa2.72□□□□□ -1.97
TRA1YHR099W MTR4P47047 1073 aaKnown RBP2.72□□□□□ -1.97
TRA1YHR099W KRE33P53914 1056 aaKnown RBP2.72□□□□□ -1.97
TRA1YHR099W RLP7P40693 322 aaKnown RBP2.72□□□□□ -1.97
TRA1YHR099W SKO1Q02100 647 aa2.72□□□□□ -1.97
TRA1YHR099W GRX3Q03835 250 aa2.72□□□□□ -1.97
TRA1YHR099W SEC20P28791 383 aa2.72□□□□□ -1.97
TRA1YHR099W RPG1P38249 964 aaKnown RBP2.72□□□□□ -1.97
TRA1YHR099W SIP3P38717 1229 aa2.72□□□□□ -1.97
TRA1YHR099W JIP5Q06214 492 aaPredicted RBP2.72□□□□□ -1.97
TRA1YHR099W BDF2Q07442 638 aa2.72□□□□□ -1.97
TRA1YHR099W SES1P07284 462 aaKnown RBP2.72□□□□□ -1.97
TRA1YHR099W SRS2P12954 1174 aa2.72□□□□□ -1.97
TRA1YHR099W RGD1P38339 666 aa2.72□□□□□ -1.97
TRA1YHR099W MYO4P32492 1471 aa2.71□□□□□ -1.97
TRA1YHR099W TCA17P32613 152 aa2.71□□□□□ -1.97
TRA1YHR099W BLI1P35727 113 aa2.71□□□□□ -1.97
TRA1YHR099W RRN3P36070 627 aa2.71□□□□□ -1.97
TRA1YHR099W SSP1P38871 571 aa2.71□□□□□ -1.97
TRA1YHR099W MPH1P40562 993 aa2.71□□□□□ -1.97
TRA1YHR099W RPN5Q12250 445 aaKnown RBP2.71□□□□□ -1.97
TRA1YHR099W YPR089WO13585 888 aa2.71□□□□□ -1.98
TRA1YHR099W TFC1P32367 649 aa2.71□□□□□ -1.98
TRA1YHR099W KAR9P32526 644 aa2.71□□□□□ -1.98
TRA1YHR099W RTS1P38903 757 aa2.71□□□□□ -1.98
TRA1YHR099W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms