Protein–RNA interactions for Protein: P53201

SWC4, SWR1-complex protein 4, yeastyeast

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWC4P53201 YML009W-BYML009W-B 477 nt20.41■□□□□ 0.86
SWC4P53201 NSR1YGR159C 1245 nt20.17■□□□□ 0.82
SWC4P53201 NOP1YDL014W 984 nt19.91■□□□□ 0.78
SWC4P53201 YKL036CYKL036C 393 nt18.48■□□□□ 0.55
SWC4P53201 MDJ1YFL016C 1536 nt17.77■□□□□ 0.44
SWC4P53201 Q0297Q0297 156 nt17.46■□□□□ 0.39
SWC4P53201 SRX1YKL086W 384 nt17.38■□□□□ 0.37
SWC4P53201 YJL027CYJL027C 417 nt17.27■□□□□ 0.36
SWC4P53201 SCS3YGL126W 1143 nt16.86■□□□□ 0.29
SWC4P53201 YCR051WYCR051W 669 nt16.5■□□□□ 0.23
SWC4P53201 YOL085CYOL085C 342 nt15.99■□□□□ 0.15
SWC4P53201 DBP2YNL112W 1641 nt15.76■□□□□ 0.11
SWC4P53201 PKP1YIL042C 1185 nt15.72■□□□□ 0.11
SWC4P53201 RPP1BYDL130W 321 nt15.67■□□□□ 0.1
SWC4P53201 TRN1tP(UGG)A 72 nt15.64■□□□□ 0.09
SWC4P53201 SUF9tP(UGG)F 72 nt15.64■□□□□ 0.09
SWC4P53201 SUF8tP(UGG)H 72 nt15.64■□□□□ 0.09
SWC4P53201 tP(UGG)LtP(UGG)L 72 nt15.64■□□□□ 0.09
SWC4P53201 SUF7tP(UGG)M 72 nt15.64■□□□□ 0.09
SWC4P53201 tP(UGG)N1tP(UGG)N1 72 nt15.64■□□□□ 0.09
SWC4P53201 tP(UGG)N2tP(UGG)N2 72 nt15.64■□□□□ 0.09
SWC4P53201 tP(UGG)O1tP(UGG)O1 72 nt15.64■□□□□ 0.09
SWC4P53201 SUF11tP(UGG)O2 72 nt15.64■□□□□ 0.09
SWC4P53201 CCC1YLR220W 969 nt15.47■□□□□ 0.07
SWC4P53201 YBR190WYBR190W 312 nt15.14■□□□□ 0.01
SWC4P53201 ATS1YAL020C 1002 nt15.12■□□□□ 0.01
SWC4P53201 SCJ1YMR214W 1134 nt15.12■□□□□ 0.01
SWC4P53201 PET122YER153C 765 nt14.94□□□□□ -0.02
SWC4P53201 RVS167YDR388W 1449 nt14.9□□□□□ -0.02
SWC4P53201 tP(UGG)O3tP(UGG)O3 72 nt14.84□□□□□ -0.03
SWC4P53201 SCR1SCR1 522 nt14.84□□□□□ -0.03
SWC4P53201 RTC3YHR087W 336 nt14.81□□□□□ -0.04
SWC4P53201 RRN5YLR141W 1092 nt14.52□□□□□ -0.09
SWC4P53201 SHR5YOL110W 714 nt14.4□□□□□ -0.1
SWC4P53201 YDJ1YNL064C 1230 nt14.38□□□□□ -0.11
SWC4P53201 RSB1YOR049C 1065 nt14.27□□□□□ -0.13
SWC4P53201 YER088W-BYER088W-B 147 nt14.25□□□□□ -0.13
SWC4P53201 GAR1YHR089C 618 nt14.01□□□□□ -0.17
SWC4P53201 PST2YDR032C 597 nt13.98□□□□□ -0.17
SWC4P53201 DEP1YAL013W 1218 nt13.92□□□□□ -0.18
SWC4P53201 URN1YPR152C 1398 nt13.9□□□□□ -0.18
SWC4P53201 RPN10YHR200W 807 nt13.77□□□□□ -0.21
SWC4P53201 YNL208WYNL208W 600 nt13.75□□□□□ -0.21
SWC4P53201 OPI9YLR338W 858 nt13.69□□□□□ -0.22
SWC4P53201 PUT4YOR348C 1884 nt13.61□□□□□ -0.23
SWC4P53201 SSA3YBL075C 1950 nt13.55□□□□□ -0.24
SWC4P53201 SAH1YER043C 1350 nt13.55□□□□□ -0.24
SWC4P53201 TIR1YER011W 765 nt13.54□□□□□ -0.24
SWC4P53201 YKL097CYKL097C 411 nt13.51□□□□□ -0.25
SWC4P53201 ARE1YCR048W 1833 nt13.4□□□□□ -0.26
SWC4P53201 SHU1YHL006C 453 nt13.38□□□□□ -0.27
SWC4P53201 SSA1YAL005C 1929 nt13.32□□□□□ -0.28
SWC4P53201 PUN1YLR414C 792 nt13.31□□□□□ -0.28
SWC4P53201 YJR018WYJR018W 363 nt13.28□□□□□ -0.28
SWC4P53201 YHR049C-AYHR049C-A 297 nt13.26□□□□□ -0.29
SWC4P53201 POA1YBR022W 534 nt13.21□□□□□ -0.29
SWC4P53201 SRB2YHR041C 633 nt13.11□□□□□ -0.31
SWC4P53201 YAL037C-BYAL037C-B 975 nt13.11□□□□□ -0.31
SWC4P53201 PTC2YER089C 1395 nt13.09□□□□□ -0.31
SWC4P53201 YJR120WYJR120W 351 nt13.09□□□□□ -0.31
SWC4P53201 RPP2BYDR382W 333 nt13.07□□□□□ -0.32
SWC4P53201 BUD23YCR047C 828 nt12.96□□□□□ -0.33
SWC4P53201 WWM1YFL010C 636 nt12.95□□□□□ -0.34
SWC4P53201 YGR021WYGR021W 873 nt12.95□□□□□ -0.34
SWC4P53201 YOR139CYOR139C 393 nt12.92□□□□□ -0.34
SWC4P53201 BSC6YOL137W 1494 nt12.91□□□□□ -0.34
SWC4P53201 NAB2YGL122C 1578 nt12.9□□□□□ -0.34
SWC4P53201 HOM6YJR139C 1080 nt12.89□□□□□ -0.35
SWC4P53201 MNP1YGL068W 585 nt12.83□□□□□ -0.36
SWC4P53201 INM2YDR287W 879 nt12.81□□□□□ -0.36
SWC4P53201 NPL3YDR432W 1245 nt12.81□□□□□ -0.36
SWC4P53201 BDH2YAL061W 1254 nt12.81□□□□□ -0.36
SWC4P53201 DAL1YIR027C 1383 nt12.78□□□□□ -0.36
SWC4P53201 YFL021C-AYFL021C-A 855 nt12.77□□□□□ -0.37
SWC4P53201 FIS1YIL065C 468 nt12.75□□□□□ -0.37
SWC4P53201 FPR4YLR449W 1179 nt12.74□□□□□ -0.37
SWC4P53201 YOL037CYOL037C 354 nt12.71□□□□□ -0.37
SWC4P53201 RKM5YLR137W 1104 nt12.7□□□□□ -0.38
SWC4P53201 LSM3YLR438C-A 270 nt12.69□□□□□ -0.38
SWC4P53201 YBL100CYBL100C 315 nt12.69□□□□□ -0.38
SWC4P53201 PHO4YFR034C 939 nt12.65□□□□□ -0.38
SWC4P53201 TRM9YML014W 840 nt12.55□□□□□ -0.4
SWC4P53201 FUN26YAL022C 1554 nt12.54□□□□□ -0.4
SWC4P53201 tM(CAU)CtM(CAU)C 72 nt12.41□□□□□ -0.42
SWC4P53201 IMT4tM(CAU)E 72 nt12.41□□□□□ -0.42
SWC4P53201 IMT3tM(CAU)J3 72 nt12.41□□□□□ -0.42
SWC4P53201 IMT1tM(CAU)O1 72 nt12.41□□□□□ -0.42
SWC4P53201 IMT2tM(CAU)P 72 nt12.41□□□□□ -0.42
SWC4P53201 CCT6YDR188W 1641 nt12.4□□□□□ -0.42
SWC4P53201 YLR281CYLR281C 468 nt12.38□□□□□ -0.43
SWC4P53201 ALF1YNL148C 765 nt12.35□□□□□ -0.43
SWC4P53201 YPS1YLR120C 1710 nt12.34□□□□□ -0.43
SWC4P53201 SUF2tP(AGG)C 72 nt12.32□□□□□ -0.44
SWC4P53201 SUF10tP(AGG)N 72 nt12.32□□□□□ -0.44
SWC4P53201 WHI5YOR083W 888 nt12.32□□□□□ -0.44
SWC4P53201 YDR095CYDR095C 411 nt12.31□□□□□ -0.44
SWC4P53201 PUS2YGL063W 1113 nt12.3□□□□□ -0.44
SWC4P53201 YHR165W-AYHR165W-A 312 nt12.21□□□□□ -0.45
SWC4P53201 YLR154C-GYLR154C-G 150 nt12.2□□□□□ -0.46
SWC4P53201 SIS1YNL007C 1059 nt12.14□□□□□ -0.47
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms