RNA–Protein interactions for RNA: YCR081W

SRB8, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB8, Length 4,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB8YCR081W MRS2Q01926 470 aa3.25□□□□□ -1.89
SRB8YCR081W YSH1Q06224 779 aaPredicted RBP3.25□□□□□ -1.89
SRB8YCR081W VTH2P40890 1549 aa3.25□□□□□ -1.89
SRB8YCR081W VPS24P36095 224 aaKnown RBP3.25□□□□□ -1.89
SRB8YCR081W INP2Q03824 705 aa3.25□□□□□ -1.89
SRB8YCR081W YOR389WQ08912 624 aa3.25□□□□□ -1.89
SRB8YCR081W IFH1P39520 1085 aa3.24□□□□□ -1.89
SRB8YCR081W SEC27P41811 889 aaKnown RBP3.24□□□□□ -1.89
SRB8YCR081W VPS60Q03390 229 aa3.24□□□□□ -1.89
SRB8YCR081W CDC45Q08032 650 aa3.24□□□□□ -1.89
SRB8YCR081W KAR3P17119 729 aa3.24□□□□□ -1.89
SRB8YCR081W RIO2P40160 425 aaKnown RBP3.24□□□□□ -1.89
SRB8YCR081W SEC39Q12745 709 aa3.24□□□□□ -1.89
SRB8YCR081W CCM1P48237 864 aaPredicted RBP3.24□□□□□ -1.89
SRB8YCR081W SUB1P54000 292 aaKnown RBP3.24□□□□□ -1.89
SRB8YCR081W ADE6P38972 1358 aaKnown RBP3.24□□□□□ -1.89
SRB8YCR081W NNF2P53253 936 aa3.24□□□□□ -1.89
SRB8YCR081W TOP1P04786 769 aa3.23□□□□□ -1.89
SRB8YCR081W YMR196WQ04336 1088 aa3.23□□□□□ -1.89
SRB8YCR081W NDL1Q06568 189 aa3.23□□□□□ -1.89
SRB8YCR081W SIR4P11978 1358 aa3.23□□□□□ -1.89
SRB8YCR081W CDC10P25342 322 aaKnown RBP3.23□□□□□ -1.89
SRB8YCR081W HYR1P40581 163 aaKnown RBP3.23□□□□□ -1.89
SRB8YCR081W RNA1P11745 407 aaKnown RBP3.23□□□□□ -1.89
SRB8YCR081W RSC8P43609 557 aaKnown RBP3.23□□□□□ -1.89
SRB8YCR081W STU2P46675 888 aa3.23□□□□□ -1.89
SRB8YCR081W GGA1Q06336 557 aa3.23□□□□□ -1.89
SRB8YCR081W MSH3P25336 1018 aa3.22□□□□□ -1.89
SRB8YCR081W RPC82P32349 654 aa3.22□□□□□ -1.89
SRB8YCR081W YMR124WP39523 943 aaKnown RBP3.22□□□□□ -1.89
SRB8YCR081W CEP3P40969 608 aa3.22□□□□□ -1.89
SRB8YCR081W RNT1Q02555 471 aa3.22□□□□□ -1.89
SRB8YCR081W RPN7Q06103 429 aaKnown RBP3.22□□□□□ -1.89
SRB8YCR081W PDR11P40550 1411 aa3.22□□□□□ -1.89
SRB8YCR081W SWI6P09959 803 aa3.22□□□□□ -1.89
SRB8YCR081W MSM1P22438 575 aa3.22□□□□□ -1.89
SRB8YCR081W TBS1P38114 1094 aa3.22□□□□□ -1.89
SRB8YCR081W PSK1P31374 1356 aa3.22□□□□□ -1.89
SRB8YCR081W HSC82P15108 705 aaKnown RBP3.22□□□□□ -1.89
SRB8YCR081W CBF5P33322 483 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SRB8YCR081W SWI1P09547 1314 aa3.21□□□□□ -1.89
SRB8YCR081W BCK1Q01389 1478 aa3.21□□□□□ -1.9
SRB8YCR081W KEX2P13134 814 aa3.21□□□□□ -1.9
SRB8YCR081W STE20Q03497 939 aaKnown RBP3.21□□□□□ -1.9
SRB8YCR081W YRM1Q12340 786 aa3.21□□□□□ -1.9
SRB8YCR081W RPL5P26321 297 aaKnown RBP3.21□□□□□ -1.9
SRB8YCR081W ISW1P38144 1129 aa3.21□□□□□ -1.9
SRB8YCR081W NFI1Q12216 726 aa3.21□□□□□ -1.9
SRB8YCR081W PBY1P38254 753 aa3.21□□□□□ -1.9
SRB8YCR081W NPR3P38742 1146 aa3.21□□□□□ -1.9
SRB8YCR081W VPS27P40343 622 aaKnown RBP3.21□□□□□ -1.9
SRB8YCR081W TEA1P47988 759 aa3.21□□□□□ -1.9
SRB8YCR081W CFT2Q12102 859 aaPredicted RBP3.21□□□□□ -1.9
SRB8YCR081W MDS3P53094 1487 aa3.2□□□□□ -1.9
SRB8YCR081W RAD26P40352 1085 aa3.2□□□□□ -1.9
SRB8YCR081W NUP145P49687 1317 aa3.2□□□□□ -1.9
SRB8YCR081W TY4B-PA0A0B7P3V8 1104 aa3.2□□□□□ -1.9
SRB8YCR081W MTR4P47047 1073 aaKnown RBP3.2□□□□□ -1.9
SRB8YCR081W SML1Q04964 104 aa3.2□□□□□ -1.9
SRB8YCR081W VPS8P39702 1274 aa3.2□□□□□ -1.9
SRB8YCR081W TFG1P41895 735 aaPredicted RBP3.2□□□□□ -1.9
SRB8YCR081W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
SRB8YCR081W TY1B-NL2Q99337 1749 aaKnown RBP3.2□□□□□ -1.9
SRB8YCR081W STE11P23561 717 aa3.19□□□□□ -1.9
SRB8YCR081W ISW2Q08773 1120 aa3.19□□□□□ -1.9
SRB8YCR081W YLL054CQ12244 843 aa3.19□□□□□ -1.9
SRB8YCR081W THR4P16120 514 aaKnown RBP3.19□□□□□ -1.9
SRB8YCR081W EFB1P32471 206 aaKnown RBP3.19□□□□□ -1.9
SRB8YCR081W BRN1P38170 754 aa3.19□□□□□ -1.9
SRB8YCR081W DMA1P38823 416 aa3.19□□□□□ -1.9
SRB8YCR081W BDH2P39713 417 aa3.19□□□□□ -1.9
SRB8YCR081W HOS4P40480 1083 aa3.19□□□□□ -1.9
SRB8YCR081W MPH1P40562 993 aa3.19□□□□□ -1.9
SRB8YCR081W HOS3Q02959 697 aaKnown RBP3.19□□□□□ -1.9
SRB8YCR081W BNR1P40450 1375 aa3.19□□□□□ -1.9
SRB8YCR081W PPX1P38698 397 aa3.19□□□□□ -1.9
SRB8YCR081W PET100P38958 111 aa3.19□□□□□ -1.9
SRB8YCR081W RRT14P40470 206 aa3.19□□□□□ -1.9
SRB8YCR081W PSO2P30620 661 aa3.18□□□□□ -1.9
SRB8YCR081W ZUO1P32527 433 aaKnown RBP3.18□□□□□ -1.9
SRB8YCR081W PUF6Q04373 656 aaKnown RBP3.18□□□□□ -1.9
SRB8YCR081W DSN1P40568 576 aa3.18□□□□□ -1.9
SRB8YCR081W MVP1P40959 511 aaKnown RBP3.18□□□□□ -1.9
SRB8YCR081W YMR1P47147 688 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
SRB8YCR081W SAC3P46674 1301 aa3.17□□□□□ -1.9
SRB8YCR081W YEF3P16521 1044 aaKnown RBP3.17□□□□□ -1.9
SRB8YCR081W SRL3P36167 246 aa3.17□□□□□ -1.9
SRB8YCR081W ARL1P38116 183 aaKnown RBP3.17□□□□□ -1.9
SRB8YCR081W NDC80P40460 691 aa3.17□□□□□ -1.9
SRB8YCR081W ECM16Q04217 1267 aaKnown RBP3.17□□□□□ -1.9
SRB8YCR081W ENT1Q12518 454 aa3.17□□□□□ -1.9
SRB8YCR081W PSD2P53037 1138 aaKnown RBP3.17□□□□□ -1.9
SRB8YCR081W PSH1Q12161 406 aa3.17□□□□□ -1.9
SRB8YCR081W LSC1P53598 329 aaKnown RBP3.16□□□□□ -1.9
SRB8YCR081W YNL035CP53962 389 aaKnown RBP3.16□□□□□ -1.9
SRB8YCR081W LCD1Q04377 747 aa3.16□□□□□ -1.9
SRB8YCR081W UBP10P53874 792 aaPredicted RBP3.16□□□□□ -1.9
SRB8YCR081W FMP30Q02883 468 aa3.16□□□□□ -1.9
SRB8YCR081W GIN4Q12263 1142 aa3.16□□□□□ -1.9
SRB8YCR081W LSO1Q3E827 93 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms