RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C BEM4P39011 633 aa8.42□□□□□ -1.06
CCR4YAL021C CIN4P39110 191 aa8.42□□□□□ -1.06
CCR4YAL021C NOP7P53261 605 aaKnown RBP8.42□□□□□ -1.06
CCR4YAL021C BRF1P29056 596 aa8.41□□□□□ -1.06
CCR4YAL021C SEC6P32844 805 aa8.41□□□□□ -1.06
CCR4YAL021C BUD4P47136 1447 aa8.41□□□□□ -1.06
CCR4YAL021C WHI5Q12416 295 aa8.41□□□□□ -1.06
CCR4YAL021C CHD1P32657 1468 aa8.41□□□□□ -1.06
CCR4YAL021C RAD3P06839 778 aa8.4□□□□□ -1.06
CCR4YAL021C SEC23P15303 768 aaKnown RBP8.4□□□□□ -1.06
CCR4YAL021C NUF2P33895 451 aa8.4□□□□□ -1.06
CCR4YAL021C YIR014WP40570 242 aa8.4□□□□□ -1.06
CCR4YAL021C PEX19Q07418 342 aa8.4□□□□□ -1.06
CCR4YAL021C TY1B-DR4Q07793 1604 aa8.4□□□□□ -1.06
CCR4YAL021C IAH1P41734 238 aa8.4□□□□□ -1.07
CCR4YAL021C VTC3Q02725 835 aa8.4□□□□□ -1.07
CCR4YAL021C VPS60Q03390 229 aa8.4□□□□□ -1.07
CCR4YAL021C HST2P53686 357 aa8.39□□□□□ -1.07
CCR4YAL021C PUS1Q12211 544 aaKnown RBP8.39□□□□□ -1.07
CCR4YAL021C GAL11P19659 1081 aa8.39□□□□□ -1.07
CCR4YAL021C ELM1P32801 640 aa8.39□□□□□ -1.07
CCR4YAL021C SLX5P32828 619 aaKnown RBP8.39□□□□□ -1.07
CCR4YAL021C UTP13Q05946 817 aaKnown RBP8.39□□□□□ -1.07
CCR4YAL021C ATG26Q06321 1198 aa8.39□□□□□ -1.07
CCR4YAL021C RSM7P47150 247 aa8.38□□□□□ -1.07
CCR4YAL021C RNT1Q02555 471 aa8.38□□□□□ -1.07
CCR4YAL021C LSO1Q3E827 93 aa8.38□□□□□ -1.07
CCR4YAL021C YOL087CQ99247 1116 aa8.38□□□□□ -1.07
CCR4YAL021C RAD16P31244 790 aa8.38□□□□□ -1.07
CCR4YAL021C YPK9Q12697 1472 aa8.38□□□□□ -1.07
CCR4YAL021C TPM2P40414 161 aa8.37□□□□□ -1.07
CCR4YAL021C CCM1P48237 864 aaPredicted RBP8.37□□□□□ -1.07
CCR4YAL021C GIR2Q03768 265 aaPredicted RBP8.37□□□□□ -1.07
CCR4YAL021C GYP7P48365 746 aa8.37□□□□□ -1.07
CCR4YAL021C DNM1P54861 757 aa8.37□□□□□ -1.07
CCR4YAL021C YML119WQ03208 357 aa8.37□□□□□ -1.07
CCR4YAL021C PDR10P51533 1564 aa8.36□□□□□ -1.07
CCR4YAL021C OLA1P38219 394 aaKnown RBP8.36□□□□□ -1.07
CCR4YAL021C HXT5P38695 592 aa8.36□□□□□ -1.07
CCR4YAL021C BNI5P53890 448 aaKnown RBP8.36□□□□□ -1.07
CCR4YAL021C CDC45Q08032 650 aa8.36□□□□□ -1.07
CCR4YAL021C SEC39Q12745 709 aa8.36□□□□□ -1.07
CCR4YAL021C HOS2P53096 452 aaPredicted RBP8.36□□□□□ -1.07
CCR4YAL021C TIM11P81449 96 aaPredicted RBP8.36□□□□□ -1.07
CCR4YAL021C YDR338CQ05497 695 aa8.36□□□□□ -1.07
CCR4YAL021C APC2Q12440 853 aa8.36□□□□□ -1.07
CCR4YAL021C PCT1P13259 424 aa8.35□□□□□ -1.07
CCR4YAL021C CMP2P14747 604 aa8.35□□□□□ -1.07
CCR4YAL021C DPH5P32469 300 aaPredicted RBP8.35□□□□□ -1.07
CCR4YAL021C KDX1P36005 433 aa8.35□□□□□ -1.07
CCR4YAL021C SEC26P41810 973 aaKnown RBP8.35□□□□□ -1.07
CCR4YAL021C REX2P54964 269 aaKnown RBP8.35□□□□□ -1.07
CCR4YAL021C YMR102CQ03177 834 aa8.35□□□□□ -1.07
CCR4YAL021C RSC2Q06488 889 aa8.35□□□□□ -1.07
CCR4YAL021C MSP1P28737 362 aa8.35□□□□□ -1.07
CCR4YAL021C TFB4Q12004 338 aa8.35□□□□□ -1.07
CCR4YAL021C SWI6P09959 803 aa8.34□□□□□ -1.07
CCR4YAL021C YEF3P16521 1044 aaKnown RBP8.34□□□□□ -1.07
CCR4YAL021C RPA135P22138 1203 aaKnown RBP8.34□□□□□ -1.07
CCR4YAL021C MRF1P30775 413 aaPredicted RBP8.34□□□□□ -1.07
CCR4YAL021C MPE1P35728 441 aaKnown RBP8.34□□□□□ -1.07
CCR4YAL021C EFM2P38347 419 aa8.34□□□□□ -1.07
CCR4YAL021C MPH1P40562 993 aa8.34□□□□□ -1.07
CCR4YAL021C BBC1P47068 1157 aa8.34□□□□□ -1.07
CCR4YAL021C MSH6Q03834 1242 aa8.34□□□□□ -1.07
CCR4YAL021C YGL140CP53120 1219 aa8.34□□□□□ -1.07
CCR4YAL021C YNL050CP53952 270 aa8.34□□□□□ -1.07
CCR4YAL021C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
CCR4YAL021C YLR419WQ06698 1435 aaKnown RBP8.34□□□□□ -1.08
CCR4YAL021C ARL1P38116 183 aaKnown RBP8.33□□□□□ -1.08
CCR4YAL021C MAK11P20484 414 aaKnown RBP8.32□□□□□ -1.08
CCR4YAL021C MRX12P47084 519 aa8.32□□□□□ -1.08
CCR4YAL021C INP52P50942 1183 aa8.32□□□□□ -1.08
CCR4YAL021C YNL035CP53962 389 aaKnown RBP8.32□□□□□ -1.08
CCR4YAL021C AVO1Q08236 1176 aa8.32□□□□□ -1.08
CCR4YAL021C CIR2Q08822 631 aa8.32□□□□□ -1.08
CCR4YAL021C NPL4P33755 580 aa8.31□□□□□ -1.08
CCR4YAL021C NDC80P40460 691 aa8.31□□□□□ -1.08
CCR4YAL021C YNL247WP53852 767 aaKnown RBP8.31□□□□□ -1.08
CCR4YAL021C JIP5Q06214 492 aaPredicted RBP8.31□□□□□ -1.08
CCR4YAL021C PDI1P17967 522 aaKnown RBP8.31□□□□□ -1.08
CCR4YAL021C UGA3P26370 528 aa8.31□□□□□ -1.08
CCR4YAL021C RME1P32338 300 aaKnown RBP8.31□□□□□ -1.08
CCR4YAL021C TOM71P38825 639 aaKnown RBP8.31□□□□□ -1.08
CCR4YAL021C HSP42Q12329 375 aa8.31□□□□□ -1.08
CCR4YAL021C YLF2P38746 405 aa8.3□□□□□ -1.08
CCR4YAL021C VPS27P40343 622 aaKnown RBP8.3□□□□□ -1.08
CCR4YAL021C HEH2Q03281 663 aa8.3□□□□□ -1.08
CCR4YAL021C RUD3Q12234 484 aaKnown RBP8.3□□□□□ -1.08
CCR4YAL021C TRM732Q03496 1420 aa8.3□□□□□ -1.08
CCR4YAL021C CDC31P06704 161 aaKnown RBP8.3□□□□□ -1.08
CCR4YAL021C SPC42P36094 363 aa8.3□□□□□ -1.08
CCR4YAL021C EPS1P40557 701 aa8.3□□□□□ -1.08
CCR4YAL021C PRP43P53131 767 aaKnown RBP8.3□□□□□ -1.08
CCR4YAL021C YML020WQ03722 664 aa8.3□□□□□ -1.08
CCR4YAL021C ARO80Q04052 950 aa8.3□□□□□ -1.08
CCR4YAL021C NKP1Q12493 238 aa8.3□□□□□ -1.08
CCR4YAL021C PES4P39684 611 aa8.29□□□□□ -1.08
CCR4YAL021C YNL058CP53947 316 aa8.29□□□□□ -1.08
CCR4YAL021C MRD1Q06106 887 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms