RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	URC2	Q04411	772 aa		4.2	□□□□□ -1.74
CBF5	YLR175W	SWA2	Q06677	668 aa		4.2	□□□□□ -1.74
CBF5	YLR175W	APC2	Q12440	853 aa		4.2	□□□□□ -1.74
CBF5	YLR175W	PAR32	Q12515	295 aa	Known RBP	4.2	□□□□□ -1.74
CBF5	YLR175W	RPS21B	Q3E754	87 aa	Known RBP	4.2	□□□□□ -1.74
CBF5	YLR175W	MHF1	Q3E835	90 aa		4.2	□□□□□ -1.74
CBF5	YLR175W	COX1	P00401	534 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	BAR1	P12630	587 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	STE4	P18851	423 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	MRPS28	P21771	286 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	HIR2	P32480	875 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	PRP19	P32523	503 aa	Known RBP	4.19	□□□□□ -1.74
CBF5	YLR175W	PRP21	P32524	280 aa	Predicted RBP	4.19	□□□□□ -1.74
CBF5	YLR175W	TOD6	P34219	525 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	CCZ1	P38273	704 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	LEU5	P38702	357 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	YHR097C	P38809	366 aa	Known RBP	4.19	□□□□□ -1.74
CBF5	YLR175W	ANS1	P38832	159 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	TDA11	P38854	504 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	EGD2	P38879	174 aa	Known RBP	4.19	□□□□□ -1.74
CBF5	YLR175W	YHR210C	P38893	341 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	GID8	P40208	455 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	MSS2	P40990	351 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	SMK1	P41808	388 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	YFL054C	P43549	646 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	CHA4	P43634	648 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	SLD3	P53135	668 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	YGR067C	P53243	804 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	MEP3	P53390	489 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	SMP3	Q04174	516 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	ATG17	Q06410	417 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	VPS36	Q06696	566 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	YLR126C	Q12288	251 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	GLE1	Q12315	538 aa		4.19	□□□□□ -1.74
CBF5	YLR175W	RPC40	P07703	335 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	RIP1	P08067	215 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	YSF3	P0C074	85 aa	Predicted RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	RPL20A	P0CX23	172 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	RPL20B	P0CX24	172 aa	Predicted RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	SAM35	P14693	329 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	ITR2	P30606	609 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	ORC2	P32833	620 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	AFR1	P33304	620 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	REC104	P33323	182 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	ECM15	P35195	104 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	PEX18	P38855	283 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	CTF8	P38877	133 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	SOP4	P39543	234 aa	Predicted RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	MDV1	P47025	714 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	BAT2	P47176	376 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	TOS2	P50078	622 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	DBP6	P53734	629 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	YLR460C	P54007	376 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	TMA20	P89886	181 aa	Predicted RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	YPL068C	Q02749	293 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	NCE101	Q02820	53 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	YDR541C	Q03049	344 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	ABZ2	Q03266	374 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	TLG1	Q03322	224 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	RSN1	Q03516	953 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	TRS23	Q03784	219 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	SEC13	Q04491	297 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	RNH1	Q04740	348 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	YOL073C	Q08232	322 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	FMP40	Q08968	688 aa	Predicted RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	HSP42	Q12329	375 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	MED11	Q99278	115 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	IRA1	P18963	3092 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	SIR3	P06701	978 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	DPM1	P14020	267 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	CNA1	P23287	553 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	YCK1	P23291	538 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	GPI12	P23797	304 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	BUD5	P25300	642 aa	Predicted RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	RPL5	P26321	297 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	SNU114	P36048	1008 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	SRO77	P38163	1010 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	EXO84	P38261	753 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	IPT1	P38954	527 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	AST2	P39945	430 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	YER158C	P40095	573 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	RRG9	P40156	214 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	IDS2	P46958	469 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	YJR141W	P47172	347 aa	Predicted RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	SEH1	P53011	349 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	SYF2	P53277	215 aa	Predicted RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	SNF12	P53628	566 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	YLR446W	Q06204	433 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	CRT10	Q08226	957 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	YDR215C	Q12240	137 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	TRM10	Q12400	293 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	PSF1	Q12488	208 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	YOS9	Q99220	542 aa		4.18	□□□□□ -1.74
CBF5	YLR175W	DET1	Q99288	334 aa	Known RBP	4.18	□□□□□ -1.74
CBF5	YLR175W	YPT1	P01123	206 aa	Known RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	CAR2	P07991	424 aa	Known RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	VMA6	P32366	345 aa	Known RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	TAT1	P38085	619 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	YBR138C	P38277	524 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	ECM34	P38728	170 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms