Protein–RNA interactions for Protein: Q3E835

MHF1, Inner kinetochore subunit MHF1, yeastyeast

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MHF1Q3E835 NSR1YGR159C 1245 nt18.79■□□□□ 0.6
MHF1Q3E835 YML009W-BYML009W-B 477 nt18.48■□□□□ 0.55
MHF1Q3E835 NOP1YDL014W 984 nt17.79■□□□□ 0.44
MHF1Q3E835 MDJ1YFL016C 1536 nt17.12■□□□□ 0.33
MHF1Q3E835 YKL036CYKL036C 393 nt16.29■□□□□ 0.2
MHF1Q3E835 YJL027CYJL027C 417 nt15.78■□□□□ 0.12
MHF1Q3E835 SRX1YKL086W 384 nt15.52■□□□□ 0.08
MHF1Q3E835 Q0297Q0297 156 nt15.43■□□□□ 0.06
MHF1Q3E835 DBP2YNL112W 1641 nt14.95□□□□□ -0.02
MHF1Q3E835 SCS3YGL126W 1143 nt14.76□□□□□ -0.05
MHF1Q3E835 YBR190WYBR190W 312 nt14.76□□□□□ -0.05
MHF1Q3E835 YCR051WYCR051W 669 nt14.68□□□□□ -0.06
MHF1Q3E835 RTC3YHR087W 336 nt14.39□□□□□ -0.11
MHF1Q3E835 TRN1tP(UGG)A 72 nt14.32□□□□□ -0.12
MHF1Q3E835 SUF9tP(UGG)F 72 nt14.32□□□□□ -0.12
MHF1Q3E835 SUF8tP(UGG)H 72 nt14.32□□□□□ -0.12
MHF1Q3E835 tP(UGG)LtP(UGG)L 72 nt14.32□□□□□ -0.12
MHF1Q3E835 SUF7tP(UGG)M 72 nt14.32□□□□□ -0.12
MHF1Q3E835 tP(UGG)N1tP(UGG)N1 72 nt14.32□□□□□ -0.12
MHF1Q3E835 tP(UGG)N2tP(UGG)N2 72 nt14.32□□□□□ -0.12
MHF1Q3E835 tP(UGG)O1tP(UGG)O1 72 nt14.32□□□□□ -0.12
MHF1Q3E835 SUF11tP(UGG)O2 72 nt14.32□□□□□ -0.12
MHF1Q3E835 CCC1YLR220W 969 nt14.15□□□□□ -0.14
MHF1Q3E835 YOL085CYOL085C 342 nt14.05□□□□□ -0.16
MHF1Q3E835 SSA3YBL075C 1950 nt14.02□□□□□ -0.17
MHF1Q3E835 RVS167YDR388W 1449 nt13.99□□□□□ -0.17
MHF1Q3E835 RPP1BYDL130W 321 nt13.84□□□□□ -0.19
MHF1Q3E835 PKP1YIL042C 1185 nt13.79□□□□□ -0.2
MHF1Q3E835 SCJ1YMR214W 1134 nt13.78□□□□□ -0.2
MHF1Q3E835 PUT4YOR348C 1884 nt13.75□□□□□ -0.21
MHF1Q3E835 tP(UGG)O3tP(UGG)O3 72 nt13.38□□□□□ -0.27
MHF1Q3E835 SHR5YOL110W 714 nt13.37□□□□□ -0.27
MHF1Q3E835 ARE1YCR048W 1833 nt13.35□□□□□ -0.27
MHF1Q3E835 URN1YPR152C 1398 nt13.29□□□□□ -0.28
MHF1Q3E835 POA1YBR022W 534 nt13.27□□□□□ -0.29
MHF1Q3E835 PET122YER153C 765 nt13.24□□□□□ -0.29
MHF1Q3E835 SAH1YER043C 1350 nt13.22□□□□□ -0.29
MHF1Q3E835 ATS1YAL020C 1002 nt13.22□□□□□ -0.29
MHF1Q3E835 OPI9YLR338W 858 nt13.2□□□□□ -0.3
MHF1Q3E835 YHR049C-AYHR049C-A 297 nt13.19□□□□□ -0.3
MHF1Q3E835 SCR1SCR1 522 nt13.16□□□□□ -0.3
MHF1Q3E835 DEP1YAL013W 1218 nt13.12□□□□□ -0.31
MHF1Q3E835 BSC6YOL137W 1494 nt13.1□□□□□ -0.31
MHF1Q3E835 RPN10YHR200W 807 nt13.01□□□□□ -0.33
MHF1Q3E835 YDJ1YNL064C 1230 nt12.97□□□□□ -0.33
MHF1Q3E835 YNL208WYNL208W 600 nt12.89□□□□□ -0.35
MHF1Q3E835 BUD23YCR047C 828 nt12.85□□□□□ -0.35
MHF1Q3E835 PUN1YLR414C 792 nt12.83□□□□□ -0.36
MHF1Q3E835 SPT5YML010W 3192 nt12.82□□□□□ -0.36
MHF1Q3E835 RRN5YLR141W 1092 nt12.8□□□□□ -0.36
MHF1Q3E835 PTC2YER089C 1395 nt12.73□□□□□ -0.37
MHF1Q3E835 GAR1YHR089C 618 nt12.73□□□□□ -0.37
MHF1Q3E835 NAB2YGL122C 1578 nt12.65□□□□□ -0.38
MHF1Q3E835 YJR018WYJR018W 363 nt12.65□□□□□ -0.38
MHF1Q3E835 SSA4YER103W 1929 nt12.62□□□□□ -0.39
MHF1Q3E835 RSB1YOR049C 1065 nt12.58□□□□□ -0.4
MHF1Q3E835 YER088W-BYER088W-B 147 nt12.55□□□□□ -0.4
MHF1Q3E835 FIS1YIL065C 468 nt12.42□□□□□ -0.42
MHF1Q3E835 DAL1YIR027C 1383 nt12.39□□□□□ -0.43
MHF1Q3E835 MEP2YNL142W 1500 nt12.35□□□□□ -0.43
MHF1Q3E835 TIR1YER011W 765 nt12.34□□□□□ -0.43
MHF1Q3E835 YJR120WYJR120W 351 nt12.33□□□□□ -0.44
MHF1Q3E835 FPR4YLR449W 1179 nt12.33□□□□□ -0.44
MHF1Q3E835 RPP2BYDR382W 333 nt12.29□□□□□ -0.44
MHF1Q3E835 INM2YDR287W 879 nt12.27□□□□□ -0.45
MHF1Q3E835 PHO4YFR034C 939 nt12.27□□□□□ -0.45
MHF1Q3E835 SSA1YAL005C 1929 nt12.27□□□□□ -0.45
MHF1Q3E835 PST2YDR032C 597 nt12.22□□□□□ -0.45
MHF1Q3E835 YPS1YLR120C 1710 nt12.2□□□□□ -0.46
MHF1Q3E835 BDF1YLR399C 2061 nt12.17□□□□□ -0.46
MHF1Q3E835 DCW1YKL046C 1350 nt12.11□□□□□ -0.47
MHF1Q3E835 YHR165W-AYHR165W-A 312 nt12.1□□□□□ -0.47
MHF1Q3E835 YBL100CYBL100C 315 nt12.07□□□□□ -0.48
MHF1Q3E835 YDR095CYDR095C 411 nt12.06□□□□□ -0.48
MHF1Q3E835 TAT1YBR069C 1860 nt12.01□□□□□ -0.49
MHF1Q3E835 EMI2YDR516C 1503 nt11.97□□□□□ -0.49
MHF1Q3E835 YMR090WYMR090W 684 nt11.96□□□□□ -0.49
MHF1Q3E835 SRB2YHR041C 633 nt11.94□□□□□ -0.5
MHF1Q3E835 BDH2YAL061W 1254 nt11.94□□□□□ -0.5
MHF1Q3E835 FUN26YAL022C 1554 nt11.91□□□□□ -0.5
MHF1Q3E835 YBR220CYBR220C 1683 nt11.9□□□□□ -0.5
MHF1Q3E835 ALF1YNL148C 765 nt11.86□□□□□ -0.51
MHF1Q3E835 YDL221WYDL221W 552 nt11.85□□□□□ -0.51
MHF1Q3E835 RPP2AYOL039W 321 nt11.83□□□□□ -0.52
MHF1Q3E835 PTP1YDL230W 1008 nt11.81□□□□□ -0.52
MHF1Q3E835 YKL097CYKL097C 411 nt11.81□□□□□ -0.52
MHF1Q3E835 TRM9YML014W 840 nt11.8□□□□□ -0.52
MHF1Q3E835 CAC2YML102W 1407 nt11.79□□□□□ -0.52
MHF1Q3E835 SDH1YKL148C 1923 nt11.79□□□□□ -0.52
MHF1Q3E835 CCT6YDR188W 1641 nt11.71□□□□□ -0.53
MHF1Q3E835 WWM1YFL010C 636 nt11.7□□□□□ -0.54
MHF1Q3E835 SHU1YHL006C 453 nt11.7□□□□□ -0.54
MHF1Q3E835 LSM3YLR438C-A 270 nt11.7□□□□□ -0.54
MHF1Q3E835 SUF2tP(AGG)C 72 nt11.67□□□□□ -0.54
MHF1Q3E835 SUF10tP(AGG)N 72 nt11.67□□□□□ -0.54
MHF1Q3E835 SIS1YNL007C 1059 nt11.67□□□□□ -0.54
MHF1Q3E835 SCC4YER147C 1875 nt11.65□□□□□ -0.54
MHF1Q3E835 IRC15YPL017C 1500 nt11.62□□□□□ -0.55
MHF1Q3E835 SEC11YIR022W 504 nt11.58□□□□□ -0.56
MHF1Q3E835 PCH2YBR186W 1695 nt11.56□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms