Protein–RNA interactions for Protein: P54007

YLR460C, Uncharacterized protein YLR460C, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR460CP54007 YML009W-BYML009W-B 477 nt18.82■□□□□ 0.6
YLR460CP54007 NSR1YGR159C 1245 nt18.69■□□□□ 0.58
YLR460CP54007 NOP1YDL014W 984 nt18.37■□□□□ 0.53
YLR460CP54007 YKL036CYKL036C 393 nt16.96■□□□□ 0.31
YLR460CP54007 MDJ1YFL016C 1536 nt16.49■□□□□ 0.23
YLR460CP54007 Q0297Q0297 156 nt16.05■□□□□ 0.16
YLR460CP54007 SRX1YKL086W 384 nt16.01■□□□□ 0.15
YLR460CP54007 YJL027CYJL027C 417 nt15.84■□□□□ 0.13
YLR460CP54007 SCS3YGL126W 1143 nt15.41■□□□□ 0.06
YLR460CP54007 YCR051WYCR051W 669 nt15.2■□□□□ 0.02
YLR460CP54007 YOL085CYOL085C 342 nt14.65□□□□□ -0.06
YLR460CP54007 DBP2YNL112W 1641 nt14.59□□□□□ -0.07
YLR460CP54007 TRN1tP(UGG)A 72 nt14.43□□□□□ -0.1
YLR460CP54007 SUF9tP(UGG)F 72 nt14.43□□□□□ -0.1
YLR460CP54007 SUF8tP(UGG)H 72 nt14.43□□□□□ -0.1
YLR460CP54007 tP(UGG)LtP(UGG)L 72 nt14.43□□□□□ -0.1
YLR460CP54007 SUF7tP(UGG)M 72 nt14.43□□□□□ -0.1
YLR460CP54007 tP(UGG)N1tP(UGG)N1 72 nt14.43□□□□□ -0.1
YLR460CP54007 tP(UGG)N2tP(UGG)N2 72 nt14.43□□□□□ -0.1
YLR460CP54007 tP(UGG)O1tP(UGG)O1 72 nt14.43□□□□□ -0.1
YLR460CP54007 SUF11tP(UGG)O2 72 nt14.43□□□□□ -0.1
YLR460CP54007 RPP1BYDL130W 321 nt14.4□□□□□ -0.1
YLR460CP54007 PKP1YIL042C 1185 nt14.4□□□□□ -0.1
YLR460CP54007 CCC1YLR220W 969 nt14.29□□□□□ -0.12
YLR460CP54007 YBR190WYBR190W 312 nt14.1□□□□□ -0.15
YLR460CP54007 RVS167YDR388W 1449 nt13.85□□□□□ -0.19
YLR460CP54007 RTC3YHR087W 336 nt13.8□□□□□ -0.2
YLR460CP54007 ATS1YAL020C 1002 nt13.8□□□□□ -0.2
YLR460CP54007 SCJ1YMR214W 1134 nt13.77□□□□□ -0.21
YLR460CP54007 PET122YER153C 765 nt13.73□□□□□ -0.21
YLR460CP54007 tP(UGG)O3tP(UGG)O3 72 nt13.67□□□□□ -0.22
YLR460CP54007 SCR1SCR1 522 nt13.67□□□□□ -0.22
YLR460CP54007 RRN5YLR141W 1092 nt13.34□□□□□ -0.27
YLR460CP54007 SHR5YOL110W 714 nt13.33□□□□□ -0.28
YLR460CP54007 YDJ1YNL064C 1230 nt13.25□□□□□ -0.29
YLR460CP54007 RSB1YOR049C 1065 nt13.11□□□□□ -0.31
YLR460CP54007 YER088W-BYER088W-B 147 nt13.07□□□□□ -0.32
YLR460CP54007 GAR1YHR089C 618 nt12.92□□□□□ -0.34
YLR460CP54007 URN1YPR152C 1398 nt12.92□□□□□ -0.34
YLR460CP54007 DEP1YAL013W 1218 nt12.89□□□□□ -0.35
YLR460CP54007 RPN10YHR200W 807 nt12.8□□□□□ -0.36
YLR460CP54007 PST2YDR032C 597 nt12.76□□□□□ -0.37
YLR460CP54007 YNL208WYNL208W 600 nt12.75□□□□□ -0.37
YLR460CP54007 OPI9YLR338W 858 nt12.72□□□□□ -0.37
YLR460CP54007 PUT4YOR348C 1884 nt12.72□□□□□ -0.37
YLR460CP54007 SAH1YER043C 1350 nt12.59□□□□□ -0.39
YLR460CP54007 ARE1YCR048W 1833 nt12.5□□□□□ -0.41
YLR460CP54007 TIR1YER011W 765 nt12.49□□□□□ -0.41
YLR460CP54007 PUN1YLR414C 792 nt12.39□□□□□ -0.43
YLR460CP54007 YHR049C-AYHR049C-A 297 nt12.36□□□□□ -0.43
YLR460CP54007 YJR018WYJR018W 363 nt12.34□□□□□ -0.43
YLR460CP54007 YKL097CYKL097C 411 nt12.33□□□□□ -0.44
YLR460CP54007 POA1YBR022W 534 nt12.33□□□□□ -0.44
YLR460CP54007 SSA1YAL005C 1929 nt12.29□□□□□ -0.44
YLR460CP54007 SHU1YHL006C 453 nt12.22□□□□□ -0.45
YLR460CP54007 PTC2YER089C 1395 nt12.18□□□□□ -0.46
YLR460CP54007 RPP2BYDR382W 333 nt12.15□□□□□ -0.46
YLR460CP54007 BUD23YCR047C 828 nt12.1□□□□□ -0.47
YLR460CP54007 YJR120WYJR120W 351 nt12.06□□□□□ -0.48
YLR460CP54007 BSC6YOL137W 1494 nt12.06□□□□□ -0.48
YLR460CP54007 NAB2YGL122C 1578 nt12.05□□□□□ -0.48
YLR460CP54007 SSA3YBL075C 1950 nt12.03□□□□□ -0.48
YLR460CP54007 SRB2YHR041C 633 nt12.02□□□□□ -0.49
YLR460CP54007 YAL037C-BYAL037C-B 975 nt12.01□□□□□ -0.49
YLR460CP54007 YGR021WYGR021W 873 nt11.95□□□□□ -0.5
YLR460CP54007 WWM1YFL010C 636 nt11.93□□□□□ -0.5
YLR460CP54007 INM2YDR287W 879 nt11.92□□□□□ -0.5
YLR460CP54007 DAL1YIR027C 1383 nt11.9□□□□□ -0.5
YLR460CP54007 BDH2YAL061W 1254 nt11.87□□□□□ -0.51
YLR460CP54007 FPR4YLR449W 1179 nt11.86□□□□□ -0.51
YLR460CP54007 HOM6YJR139C 1080 nt11.84□□□□□ -0.51
YLR460CP54007 FIS1YIL065C 468 nt11.83□□□□□ -0.52
YLR460CP54007 YBL100CYBL100C 315 nt11.79□□□□□ -0.52
YLR460CP54007 YFL021C-AYFL021C-A 855 nt11.78□□□□□ -0.52
YLR460CP54007 MNP1YGL068W 585 nt11.77□□□□□ -0.53
YLR460CP54007 PHO4YFR034C 939 nt11.76□□□□□ -0.53
YLR460CP54007 YOR139CYOR139C 393 nt11.75□□□□□ -0.53
YLR460CP54007 LSM3YLR438C-A 270 nt11.74□□□□□ -0.53
YLR460CP54007 NPL3YDR432W 1245 nt11.73□□□□□ -0.53
YLR460CP54007 RKM5YLR137W 1104 nt11.68□□□□□ -0.54
YLR460CP54007 TRM9YML014W 840 nt11.66□□□□□ -0.54
YLR460CP54007 YOL037CYOL037C 354 nt11.66□□□□□ -0.54
YLR460CP54007 FUN26YAL022C 1554 nt11.64□□□□□ -0.55
YLR460CP54007 CCT6YDR188W 1641 nt11.52□□□□□ -0.57
YLR460CP54007 ALF1YNL148C 765 nt11.51□□□□□ -0.57
YLR460CP54007 YPS1YLR120C 1710 nt11.51□□□□□ -0.57
YLR460CP54007 SUF2tP(AGG)C 72 nt11.47□□□□□ -0.57
YLR460CP54007 SUF10tP(AGG)N 72 nt11.47□□□□□ -0.57
YLR460CP54007 YDR095CYDR095C 411 nt11.45□□□□□ -0.58
YLR460CP54007 YHR165W-AYHR165W-A 312 nt11.41□□□□□ -0.58
YLR460CP54007 SPT5YML010W 3192 nt11.37□□□□□ -0.59
YLR460CP54007 YLR281CYLR281C 468 nt11.35□□□□□ -0.59
YLR460CP54007 MEP2YNL142W 1500 nt11.32□□□□□ -0.6
YLR460CP54007 tM(CAU)CtM(CAU)C 72 nt11.32□□□□□ -0.6
YLR460CP54007 IMT4tM(CAU)E 72 nt11.32□□□□□ -0.6
YLR460CP54007 IMT3tM(CAU)J3 72 nt11.32□□□□□ -0.6
YLR460CP54007 IMT1tM(CAU)O1 72 nt11.32□□□□□ -0.6
YLR460CP54007 IMT2tM(CAU)P 72 nt11.32□□□□□ -0.6
YLR460CP54007 WHI5YOR083W 888 nt11.31□□□□□ -0.6
YLR460CP54007 SIS1YNL007C 1059 nt11.28□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms