Protein–RNA interactions for Protein: P0C074

YSF3, RDS3 complex subunit 10, yeastyeast

Predicted RBP Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YSF3P0C074 YML009W-BYML009W-B 477 nt18.91■□□□□ 0.62
YSF3P0C074 NSR1YGR159C 1245 nt18.75■□□□□ 0.59
YSF3P0C074 NOP1YDL014W 984 nt18.45■□□□□ 0.54
YSF3P0C074 YKL036CYKL036C 393 nt17.07■□□□□ 0.32
YSF3P0C074 MDJ1YFL016C 1536 nt16.55■□□□□ 0.24
YSF3P0C074 Q0297Q0297 156 nt16.17■□□□□ 0.18
YSF3P0C074 SRX1YKL086W 384 nt16.11■□□□□ 0.17
YSF3P0C074 YJL027CYJL027C 417 nt15.93■□□□□ 0.14
YSF3P0C074 SCS3YGL126W 1143 nt15.56■□□□□ 0.08
YSF3P0C074 YCR051WYCR051W 669 nt15.25■□□□□ 0.03
YSF3P0C074 YOL085CYOL085C 342 nt14.76□□□□□ -0.05
YSF3P0C074 DBP2YNL112W 1641 nt14.67□□□□□ -0.06
YSF3P0C074 TRN1tP(UGG)A 72 nt14.53□□□□□ -0.08
YSF3P0C074 SUF9tP(UGG)F 72 nt14.53□□□□□ -0.08
YSF3P0C074 SUF8tP(UGG)H 72 nt14.53□□□□□ -0.08
YSF3P0C074 tP(UGG)LtP(UGG)L 72 nt14.53□□□□□ -0.08
YSF3P0C074 SUF7tP(UGG)M 72 nt14.53□□□□□ -0.08
YSF3P0C074 tP(UGG)N1tP(UGG)N1 72 nt14.53□□□□□ -0.08
YSF3P0C074 tP(UGG)N2tP(UGG)N2 72 nt14.53□□□□□ -0.08
YSF3P0C074 tP(UGG)O1tP(UGG)O1 72 nt14.53□□□□□ -0.08
YSF3P0C074 SUF11tP(UGG)O2 72 nt14.53□□□□□ -0.08
YSF3P0C074 RPP1BYDL130W 321 nt14.5□□□□□ -0.09
YSF3P0C074 PKP1YIL042C 1185 nt14.49□□□□□ -0.09
YSF3P0C074 CCC1YLR220W 969 nt14.32□□□□□ -0.12
YSF3P0C074 YBR190WYBR190W 312 nt14.13□□□□□ -0.15
YSF3P0C074 ATS1YAL020C 1002 nt13.92□□□□□ -0.18
YSF3P0C074 SCJ1YMR214W 1134 nt13.92□□□□□ -0.18
YSF3P0C074 RVS167YDR388W 1449 nt13.87□□□□□ -0.19
YSF3P0C074 PET122YER153C 765 nt13.82□□□□□ -0.2
YSF3P0C074 RTC3YHR087W 336 nt13.79□□□□□ -0.2
YSF3P0C074 tP(UGG)O3tP(UGG)O3 72 nt13.74□□□□□ -0.21
YSF3P0C074 SCR1SCR1 522 nt13.72□□□□□ -0.21
YSF3P0C074 RRN5YLR141W 1092 nt13.4□□□□□ -0.26
YSF3P0C074 SHR5YOL110W 714 nt13.39□□□□□ -0.27
YSF3P0C074 YDJ1YNL064C 1230 nt13.32□□□□□ -0.28
YSF3P0C074 RSB1YOR049C 1065 nt13.17□□□□□ -0.3
YSF3P0C074 YER088W-BYER088W-B 147 nt13.16□□□□□ -0.3
YSF3P0C074 GAR1YHR089C 618 nt12.96□□□□□ -0.33
YSF3P0C074 URN1YPR152C 1398 nt12.94□□□□□ -0.34
YSF3P0C074 DEP1YAL013W 1218 nt12.92□□□□□ -0.34
YSF3P0C074 PST2YDR032C 597 nt12.88□□□□□ -0.35
YSF3P0C074 RPN10YHR200W 807 nt12.82□□□□□ -0.36
YSF3P0C074 YNL208WYNL208W 600 nt12.78□□□□□ -0.36
YSF3P0C074 OPI9YLR338W 858 nt12.76□□□□□ -0.37
YSF3P0C074 PUT4YOR348C 1884 nt12.76□□□□□ -0.37
YSF3P0C074 SAH1YER043C 1350 nt12.62□□□□□ -0.39
YSF3P0C074 TIR1YER011W 765 nt12.55□□□□□ -0.4
YSF3P0C074 ARE1YCR048W 1833 nt12.55□□□□□ -0.4
YSF3P0C074 YKL097CYKL097C 411 nt12.42□□□□□ -0.42
YSF3P0C074 PUN1YLR414C 792 nt12.41□□□□□ -0.42
YSF3P0C074 YHR049C-AYHR049C-A 297 nt12.4□□□□□ -0.42
YSF3P0C074 SSA1YAL005C 1929 nt12.37□□□□□ -0.43
YSF3P0C074 YJR018WYJR018W 363 nt12.36□□□□□ -0.43
YSF3P0C074 SHU1YHL006C 453 nt12.33□□□□□ -0.44
YSF3P0C074 POA1YBR022W 534 nt12.33□□□□□ -0.44
YSF3P0C074 PTC2YER089C 1395 nt12.2□□□□□ -0.46
YSF3P0C074 YJR120WYJR120W 351 nt12.17□□□□□ -0.46
YSF3P0C074 RPP2BYDR382W 333 nt12.16□□□□□ -0.46
YSF3P0C074 SRB2YHR041C 633 nt12.14□□□□□ -0.47
YSF3P0C074 BUD23YCR047C 828 nt12.09□□□□□ -0.47
YSF3P0C074 BSC6YOL137W 1494 nt12.08□□□□□ -0.48
YSF3P0C074 YAL037C-BYAL037C-B 975 nt12.07□□□□□ -0.48
YSF3P0C074 NAB2YGL122C 1578 nt12.06□□□□□ -0.48
YSF3P0C074 YGR021WYGR021W 873 nt12.01□□□□□ -0.49
YSF3P0C074 WWM1YFL010C 636 nt11.99□□□□□ -0.49
YSF3P0C074 HOM6YJR139C 1080 nt11.94□□□□□ -0.5
YSF3P0C074 DAL1YIR027C 1383 nt11.92□□□□□ -0.5
YSF3P0C074 INM2YDR287W 879 nt11.92□□□□□ -0.5
YSF3P0C074 BDH2YAL061W 1254 nt11.92□□□□□ -0.5
YSF3P0C074 FIS1YIL065C 468 nt11.91□□□□□ -0.5
YSF3P0C074 YOR139CYOR139C 393 nt11.89□□□□□ -0.51
YSF3P0C074 MNP1YGL068W 585 nt11.87□□□□□ -0.51
YSF3P0C074 SSA3YBL075C 1950 nt11.85□□□□□ -0.51
YSF3P0C074 FPR4YLR449W 1179 nt11.85□□□□□ -0.51
YSF3P0C074 YFL021C-AYFL021C-A 855 nt11.84□□□□□ -0.51
YSF3P0C074 YBL100CYBL100C 315 nt11.83□□□□□ -0.52
YSF3P0C074 NPL3YDR432W 1245 nt11.81□□□□□ -0.52
YSF3P0C074 PHO4YFR034C 939 nt11.81□□□□□ -0.52
YSF3P0C074 LSM3YLR438C-A 270 nt11.79□□□□□ -0.52
YSF3P0C074 RKM5YLR137W 1104 nt11.77□□□□□ -0.53
YSF3P0C074 YOL037CYOL037C 354 nt11.76□□□□□ -0.53
YSF3P0C074 FUN26YAL022C 1554 nt11.67□□□□□ -0.54
YSF3P0C074 TRM9YML014W 840 nt11.66□□□□□ -0.54
YSF3P0C074 CCT6YDR188W 1641 nt11.57□□□□□ -0.56
YSF3P0C074 YPS1YLR120C 1710 nt11.55□□□□□ -0.56
YSF3P0C074 YDR095CYDR095C 411 nt11.5□□□□□ -0.57
YSF3P0C074 ALF1YNL148C 765 nt11.5□□□□□ -0.57
YSF3P0C074 SUF2tP(AGG)C 72 nt11.48□□□□□ -0.57
YSF3P0C074 SUF10tP(AGG)N 72 nt11.48□□□□□ -0.57
YSF3P0C074 SPT5YML010W 3192 nt11.44□□□□□ -0.58
YSF3P0C074 YLR281CYLR281C 468 nt11.44□□□□□ -0.58
YSF3P0C074 tM(CAU)CtM(CAU)C 72 nt11.42□□□□□ -0.58
YSF3P0C074 IMT4tM(CAU)E 72 nt11.42□□□□□ -0.58
YSF3P0C074 IMT3tM(CAU)J3 72 nt11.42□□□□□ -0.58
YSF3P0C074 IMT1tM(CAU)O1 72 nt11.42□□□□□ -0.58
YSF3P0C074 IMT2tM(CAU)P 72 nt11.42□□□□□ -0.58
YSF3P0C074 YHR165W-AYHR165W-A 312 nt11.4□□□□□ -0.58
YSF3P0C074 WHI5YOR083W 888 nt11.38□□□□□ -0.59
YSF3P0C074 MEP2YNL142W 1500 nt11.33□□□□□ -0.6
YSF3P0C074 PUS2YGL063W 1113 nt11.32□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms