Protein–RNA interactions for Protein: P06701

SIR3, Regulatory protein SIR3, yeastyeast

Predictions only

Length 978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIR3P06701 NSR1YGR159C 1245 nt18.71■□□□□ 0.59
SIR3P06701 YML009W-BYML009W-B 477 nt18.61■□□□□ 0.57
SIR3P06701 NOP1YDL014W 984 nt17.89■□□□□ 0.45
SIR3P06701 MDJ1YFL016C 1536 nt17■□□□□ 0.31
SIR3P06701 YKL036CYKL036C 393 nt16.28■□□□□ 0.2
SIR3P06701 SRX1YKL086W 384 nt15.69■□□□□ 0.1
SIR3P06701 Q0297Q0297 156 nt15.64■□□□□ 0.09
SIR3P06701 YJL027CYJL027C 417 nt15.57■□□□□ 0.08
SIR3P06701 DBP2YNL112W 1641 nt14.95□□□□□ -0.02
SIR3P06701 YCR051WYCR051W 669 nt14.84□□□□□ -0.03
SIR3P06701 SCS3YGL126W 1143 nt14.73□□□□□ -0.05
SIR3P06701 YBR190WYBR190W 312 nt14.5□□□□□ -0.09
SIR3P06701 TRN1tP(UGG)A 72 nt14.42□□□□□ -0.1
SIR3P06701 SUF9tP(UGG)F 72 nt14.42□□□□□ -0.1
SIR3P06701 SUF8tP(UGG)H 72 nt14.42□□□□□ -0.1
SIR3P06701 tP(UGG)LtP(UGG)L 72 nt14.42□□□□□ -0.1
SIR3P06701 SUF7tP(UGG)M 72 nt14.42□□□□□ -0.1
SIR3P06701 tP(UGG)N1tP(UGG)N1 72 nt14.42□□□□□ -0.1
SIR3P06701 tP(UGG)N2tP(UGG)N2 72 nt14.42□□□□□ -0.1
SIR3P06701 tP(UGG)O1tP(UGG)O1 72 nt14.42□□□□□ -0.1
SIR3P06701 SUF11tP(UGG)O2 72 nt14.42□□□□□ -0.1
SIR3P06701 CCC1YLR220W 969 nt14.22□□□□□ -0.13
SIR3P06701 SSA3YBL075C 1950 nt14.18□□□□□ -0.14
SIR3P06701 YOL085CYOL085C 342 nt14.15□□□□□ -0.14
SIR3P06701 RTC3YHR087W 336 nt14.13□□□□□ -0.15
SIR3P06701 RPP1BYDL130W 321 nt14.03□□□□□ -0.16
SIR3P06701 PKP1YIL042C 1185 nt13.99□□□□□ -0.17
SIR3P06701 SCJ1YMR214W 1134 nt13.89□□□□□ -0.19
SIR3P06701 RVS167YDR388W 1449 nt13.83□□□□□ -0.2
SIR3P06701 tP(UGG)O3tP(UGG)O3 72 nt13.51□□□□□ -0.25
SIR3P06701 PET122YER153C 765 nt13.49□□□□□ -0.25
SIR3P06701 PUT4YOR348C 1884 nt13.47□□□□□ -0.25
SIR3P06701 SHR5YOL110W 714 nt13.35□□□□□ -0.27
SIR3P06701 URN1YPR152C 1398 nt13.17□□□□□ -0.3
SIR3P06701 ARE1YCR048W 1833 nt13.14□□□□□ -0.31
SIR3P06701 SCR1SCR1 522 nt13.14□□□□□ -0.31
SIR3P06701 DEP1YAL013W 1218 nt13.1□□□□□ -0.31
SIR3P06701 ATS1YAL020C 1002 nt13.06□□□□□ -0.32
SIR3P06701 SAH1YER043C 1350 nt13.06□□□□□ -0.32
SIR3P06701 YDJ1YNL064C 1230 nt13.05□□□□□ -0.32
SIR3P06701 OPI9YLR338W 858 nt13.04□□□□□ -0.32
SIR3P06701 RRN5YLR141W 1092 nt13.03□□□□□ -0.32
SIR3P06701 POA1YBR022W 534 nt12.98□□□□□ -0.33
SIR3P06701 YHR049C-AYHR049C-A 297 nt12.95□□□□□ -0.34
SIR3P06701 GAR1YHR089C 618 nt12.82□□□□□ -0.36
SIR3P06701 RPN10YHR200W 807 nt12.82□□□□□ -0.36
SIR3P06701 YNL208WYNL208W 600 nt12.8□□□□□ -0.36
SIR3P06701 BSC6YOL137W 1494 nt12.79□□□□□ -0.36
SIR3P06701 YER088W-BYER088W-B 147 nt12.79□□□□□ -0.36
SIR3P06701 RSB1YOR049C 1065 nt12.65□□□□□ -0.38
SIR3P06701 SPT5YML010W 3192 nt12.61□□□□□ -0.39
SIR3P06701 PUN1YLR414C 792 nt12.61□□□□□ -0.39
SIR3P06701 BUD23YCR047C 828 nt12.58□□□□□ -0.4
SIR3P06701 PTC2YER089C 1395 nt12.55□□□□□ -0.4
SIR3P06701 YJR018WYJR018W 363 nt12.51□□□□□ -0.41
SIR3P06701 YJR120WYJR120W 351 nt12.42□□□□□ -0.42
SIR3P06701 TIR1YER011W 765 nt12.4□□□□□ -0.42
SIR3P06701 NAB2YGL122C 1578 nt12.39□□□□□ -0.43
SIR3P06701 SSA1YAL005C 1929 nt12.37□□□□□ -0.43
SIR3P06701 SSA4YER103W 1929 nt12.34□□□□□ -0.43
SIR3P06701 FIS1YIL065C 468 nt12.31□□□□□ -0.44
SIR3P06701 SRB2YHR041C 633 nt12.21□□□□□ -0.45
SIR3P06701 DAL1YIR027C 1383 nt12.19□□□□□ -0.46
SIR3P06701 PST2YDR032C 597 nt12.16□□□□□ -0.46
SIR3P06701 FPR4YLR449W 1179 nt12.13□□□□□ -0.47
SIR3P06701 RPP2BYDR382W 333 nt12.12□□□□□ -0.47
SIR3P06701 PHO4YFR034C 939 nt12.12□□□□□ -0.47
SIR3P06701 PAC11YDR488C 1602 nt12.11□□□□□ -0.47
SIR3P06701 INM2YDR287W 879 nt12.06□□□□□ -0.48
SIR3P06701 MEP2YNL142W 1500 nt12.06□□□□□ -0.48
SIR3P06701 NVJ2YPR091C 2313 nt11.99□□□□□ -0.49
SIR3P06701 YPS1YLR120C 1710 nt11.98□□□□□ -0.49
SIR3P06701 YBL100CYBL100C 315 nt11.96□□□□□ -0.49
SIR3P06701 BDF1YLR399C 2061 nt11.95□□□□□ -0.5
SIR3P06701 BDH2YAL061W 1254 nt11.89□□□□□ -0.51
SIR3P06701 DCW1YKL046C 1350 nt11.88□□□□□ -0.51
SIR3P06701 YDR095CYDR095C 411 nt11.87□□□□□ -0.51
SIR3P06701 WWM1YFL010C 636 nt11.84□□□□□ -0.51
SIR3P06701 YHR165W-AYHR165W-A 312 nt11.83□□□□□ -0.52
SIR3P06701 FUN26YAL022C 1554 nt11.81□□□□□ -0.52
SIR3P06701 TAT1YBR069C 1860 nt11.77□□□□□ -0.53
SIR3P06701 SHU1YHL006C 453 nt11.77□□□□□ -0.53
SIR3P06701 FPS1YLL043W 2010 nt11.77□□□□□ -0.53
SIR3P06701 PTP1YDL230W 1008 nt11.69□□□□□ -0.54
SIR3P06701 EMI2YDR516C 1503 nt11.69□□□□□ -0.54
SIR3P06701 YAL037C-BYAL037C-B 975 nt11.67□□□□□ -0.54
SIR3P06701 TRM9YML014W 840 nt11.67□□□□□ -0.54
SIR3P06701 LSM3YLR438C-A 270 nt11.65□□□□□ -0.54
SIR3P06701 YBR220CYBR220C 1683 nt11.65□□□□□ -0.55
SIR3P06701 ALF1YNL148C 765 nt11.64□□□□□ -0.55
SIR3P06701 CCT6YDR188W 1641 nt11.64□□□□□ -0.55
SIR3P06701 CAC2YML102W 1407 nt11.63□□□□□ -0.55
SIR3P06701 HOM6YJR139C 1080 nt11.63□□□□□ -0.55
SIR3P06701 YFL021C-AYFL021C-A 855 nt11.61□□□□□ -0.55
SIR3P06701 YGR021WYGR021W 873 nt11.61□□□□□ -0.55
SIR3P06701 Q0182Q0182 405 nt11.61□□□□□ -0.55
SIR3P06701 RPP2AYOL039W 321 nt11.61□□□□□ -0.55
SIR3P06701 YMR090WYMR090W 684 nt11.59□□□□□ -0.55
SIR3P06701 YDL221WYDL221W 552 nt11.57□□□□□ -0.56
SIR3P06701 MNP1YGL068W 585 nt11.57□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms