Protein–RNA interactions for Protein: P00401

COX1, Cytochrome c oxidase subunit 1, yeastyeast

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
COX1P00401 YML009W-BYML009W-B 477 nt19.06■□□□□ 0.64
COX1P00401 NSR1YGR159C 1245 nt18.7■□□□□ 0.58
COX1P00401 NOP1YDL014W 984 nt18.63■□□□□ 0.57
COX1P00401 YKL036CYKL036C 393 nt17.39■□□□□ 0.37
COX1P00401 MDJ1YFL016C 1536 nt16.4■□□□□ 0.22
COX1P00401 Q0297Q0297 156 nt16.34■□□□□ 0.21
COX1P00401 YJL027CYJL027C 417 nt16.3■□□□□ 0.2
COX1P00401 SRX1YKL086W 384 nt16.24■□□□□ 0.19
COX1P00401 SCS3YGL126W 1143 nt15.93■□□□□ 0.14
COX1P00401 YCR051WYCR051W 669 nt15.47■□□□□ 0.07
COX1P00401 YOL085CYOL085C 342 nt15.04■□□□□ -0
COX1P00401 PKP1YIL042C 1185 nt14.8□□□□□ -0.04
COX1P00401 RPP1BYDL130W 321 nt14.68□□□□□ -0.06
COX1P00401 DBP2YNL112W 1641 nt14.55□□□□□ -0.08
COX1P00401 TRN1tP(UGG)A 72 nt14.54□□□□□ -0.08
COX1P00401 SUF9tP(UGG)F 72 nt14.54□□□□□ -0.08
COX1P00401 SUF8tP(UGG)H 72 nt14.54□□□□□ -0.08
COX1P00401 tP(UGG)LtP(UGG)L 72 nt14.54□□□□□ -0.08
COX1P00401 SUF7tP(UGG)M 72 nt14.54□□□□□ -0.08
COX1P00401 tP(UGG)N1tP(UGG)N1 72 nt14.54□□□□□ -0.08
COX1P00401 tP(UGG)N2tP(UGG)N2 72 nt14.54□□□□□ -0.08
COX1P00401 tP(UGG)O1tP(UGG)O1 72 nt14.54□□□□□ -0.08
COX1P00401 SUF11tP(UGG)O2 72 nt14.54□□□□□ -0.08
COX1P00401 CCC1YLR220W 969 nt14.44□□□□□ -0.1
COX1P00401 SCJ1YMR214W 1134 nt14.4□□□□□ -0.1
COX1P00401 ATS1YAL020C 1002 nt14.31□□□□□ -0.12
COX1P00401 PET122YER153C 765 nt13.99□□□□□ -0.17
COX1P00401 SCR1SCR1 522 nt13.95□□□□□ -0.18
COX1P00401 YBR190WYBR190W 312 nt13.91□□□□□ -0.18
COX1P00401 tP(UGG)O3tP(UGG)O3 72 nt13.85□□□□□ -0.19
COX1P00401 RVS167YDR388W 1449 nt13.82□□□□□ -0.2
COX1P00401 RTC3YHR087W 336 nt13.67□□□□□ -0.22
COX1P00401 RRN5YLR141W 1092 nt13.61□□□□□ -0.23
COX1P00401 RSB1YOR049C 1065 nt13.43□□□□□ -0.26
COX1P00401 YDJ1YNL064C 1230 nt13.39□□□□□ -0.27
COX1P00401 SHR5YOL110W 714 nt13.37□□□□□ -0.27
COX1P00401 YER088W-BYER088W-B 147 nt13.35□□□□□ -0.27
COX1P00401 PST2YDR032C 597 nt13.2□□□□□ -0.3
COX1P00401 GAR1YHR089C 618 nt13.08□□□□□ -0.32
COX1P00401 DEP1YAL013W 1218 nt12.92□□□□□ -0.34
COX1P00401 URN1YPR152C 1398 nt12.85□□□□□ -0.35
COX1P00401 YKL097CYKL097C 411 nt12.84□□□□□ -0.35
COX1P00401 RPN10YHR200W 807 nt12.75□□□□□ -0.37
COX1P00401 YNL208WYNL208W 600 nt12.75□□□□□ -0.37
COX1P00401 TIR1YER011W 765 nt12.62□□□□□ -0.39
COX1P00401 SHU1YHL006C 453 nt12.61□□□□□ -0.39
COX1P00401 OPI9YLR338W 858 nt12.6□□□□□ -0.39
COX1P00401 SAH1YER043C 1350 nt12.46□□□□□ -0.41
COX1P00401 SSA3YBL075C 1950 nt12.45□□□□□ -0.42
COX1P00401 PUT4YOR348C 1884 nt12.42□□□□□ -0.42
COX1P00401 SSA1YAL005C 1929 nt12.39□□□□□ -0.43
COX1P00401 YAL037C-BYAL037C-B 975 nt12.36□□□□□ -0.43
COX1P00401 YJR018WYJR018W 363 nt12.27□□□□□ -0.45
COX1P00401 ARE1YCR048W 1833 nt12.27□□□□□ -0.45
COX1P00401 PUN1YLR414C 792 nt12.26□□□□□ -0.45
COX1P00401 YOR139CYOR139C 393 nt12.24□□□□□ -0.45
COX1P00401 SRB2YHR041C 633 nt12.2□□□□□ -0.46
COX1P00401 YHR049C-AYHR049C-A 297 nt12.15□□□□□ -0.46
COX1P00401 NPL3YDR432W 1245 nt12.14□□□□□ -0.47
COX1P00401 RPP2BYDR382W 333 nt12.12□□□□□ -0.47
COX1P00401 YGR021WYGR021W 873 nt12.12□□□□□ -0.47
COX1P00401 WWM1YFL010C 636 nt12.09□□□□□ -0.47
COX1P00401 YJR120WYJR120W 351 nt12.08□□□□□ -0.48
COX1P00401 POA1YBR022W 534 nt12.08□□□□□ -0.48
COX1P00401 PTC2YER089C 1395 nt12.06□□□□□ -0.48
COX1P00401 HOM6YJR139C 1080 nt12.06□□□□□ -0.48
COX1P00401 MNP1YGL068W 585 nt12.05□□□□□ -0.48
COX1P00401 YOL037CYOL037C 354 nt11.96□□□□□ -0.49
COX1P00401 BUD23YCR047C 828 nt11.92□□□□□ -0.5
COX1P00401 YFL021C-AYFL021C-A 855 nt11.91□□□□□ -0.5
COX1P00401 RKM5YLR137W 1104 nt11.9□□□□□ -0.5
COX1P00401 BDH2YAL061W 1254 nt11.88□□□□□ -0.51
COX1P00401 NAB2YGL122C 1578 nt11.86□□□□□ -0.51
COX1P00401 Q0182Q0182 405 nt11.81□□□□□ -0.52
COX1P00401 INM2YDR287W 879 nt11.8□□□□□ -0.52
COX1P00401 FPR4YLR449W 1179 nt11.78□□□□□ -0.52
COX1P00401 LSM3YLR438C-A 270 nt11.77□□□□□ -0.53
COX1P00401 DAL1YIR027C 1383 nt11.77□□□□□ -0.53
COX1P00401 BSC6YOL137W 1494 nt11.76□□□□□ -0.53
COX1P00401 tM(CAU)CtM(CAU)C 72 nt11.75□□□□□ -0.53
COX1P00401 IMT4tM(CAU)E 72 nt11.75□□□□□ -0.53
COX1P00401 IMT3tM(CAU)J3 72 nt11.75□□□□□ -0.53
COX1P00401 IMT1tM(CAU)O1 72 nt11.75□□□□□ -0.53
COX1P00401 IMT2tM(CAU)P 72 nt11.75□□□□□ -0.53
COX1P00401 YBL100CYBL100C 315 nt11.74□□□□□ -0.53
COX1P00401 FIS1YIL065C 468 nt11.71□□□□□ -0.53
COX1P00401 PHO4YFR034C 939 nt11.64□□□□□ -0.55
COX1P00401 TRM9YML014W 840 nt11.64□□□□□ -0.55
COX1P00401 PUS2YGL063W 1113 nt11.63□□□□□ -0.55
COX1P00401 YLR281CYLR281C 468 nt11.63□□□□□ -0.55
COX1P00401 FUN26YAL022C 1554 nt11.6□□□□□ -0.55
COX1P00401 WHI5YOR083W 888 nt11.57□□□□□ -0.56
COX1P00401 CCT6YDR188W 1641 nt11.48□□□□□ -0.57
COX1P00401 ALF1YNL148C 765 nt11.42□□□□□ -0.58
COX1P00401 MOT3YMR070W 1473 nt11.41□□□□□ -0.58
COX1P00401 SUF2tP(AGG)C 72 nt11.4□□□□□ -0.58
COX1P00401 SUF10tP(AGG)N 72 nt11.4□□□□□ -0.58
COX1P00401 YLR154C-GYLR154C-G 150 nt11.39□□□□□ -0.59
COX1P00401 DSK2YMR276W 1122 nt11.37□□□□□ -0.59
COX1P00401 FMP45YDL222C 930 nt11.34□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 38.8 ms