Protein–RNA interactions for Protein: Q06677

SWA2, Auxilin-like clathrin uncoating factor SWA2, yeastyeast

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWA2Q06677 NSR1YGR159C 1245 nt18.99■□□□□ 0.63
SWA2Q06677 YML009W-BYML009W-B 477 nt18.74■□□□□ 0.59
SWA2Q06677 NOP1YDL014W 984 nt18.04■□□□□ 0.48
SWA2Q06677 MDJ1YFL016C 1536 nt17.22■□□□□ 0.35
SWA2Q06677 YKL036CYKL036C 393 nt16.36■□□□□ 0.21
SWA2Q06677 SRX1YKL086W 384 nt15.84■□□□□ 0.13
SWA2Q06677 YJL027CYJL027C 417 nt15.79■□□□□ 0.12
SWA2Q06677 Q0297Q0297 156 nt15.78■□□□□ 0.12
SWA2Q06677 DBP2YNL112W 1641 nt15.19■□□□□ 0.02
SWA2Q06677 YCR051WYCR051W 669 nt14.91□□□□□ -0.02
SWA2Q06677 YBR190WYBR190W 312 nt14.77□□□□□ -0.05
SWA2Q06677 SCS3YGL126W 1143 nt14.75□□□□□ -0.05
SWA2Q06677 TRN1tP(UGG)A 72 nt14.58□□□□□ -0.08
SWA2Q06677 SUF9tP(UGG)F 72 nt14.58□□□□□ -0.08
SWA2Q06677 SUF8tP(UGG)H 72 nt14.58□□□□□ -0.08
SWA2Q06677 tP(UGG)LtP(UGG)L 72 nt14.58□□□□□ -0.08
SWA2Q06677 SUF7tP(UGG)M 72 nt14.58□□□□□ -0.08
SWA2Q06677 tP(UGG)N1tP(UGG)N1 72 nt14.58□□□□□ -0.08
SWA2Q06677 tP(UGG)N2tP(UGG)N2 72 nt14.58□□□□□ -0.08
SWA2Q06677 tP(UGG)O1tP(UGG)O1 72 nt14.58□□□□□ -0.08
SWA2Q06677 SUF11tP(UGG)O2 72 nt14.58□□□□□ -0.08
SWA2Q06677 RTC3YHR087W 336 nt14.32□□□□□ -0.12
SWA2Q06677 CCC1YLR220W 969 nt14.31□□□□□ -0.12
SWA2Q06677 YOL085CYOL085C 342 nt14.23□□□□□ -0.13
SWA2Q06677 RPP1BYDL130W 321 nt14.13□□□□□ -0.15
SWA2Q06677 SCJ1YMR214W 1134 nt14.04□□□□□ -0.16
SWA2Q06677 RVS167YDR388W 1449 nt14.01□□□□□ -0.17
SWA2Q06677 PKP1YIL042C 1185 nt14□□□□□ -0.17
SWA2Q06677 SSA3YBL075C 1950 nt13.95□□□□□ -0.18
SWA2Q06677 PUT4YOR348C 1884 nt13.78□□□□□ -0.2
SWA2Q06677 tP(UGG)O3tP(UGG)O3 72 nt13.63□□□□□ -0.23
SWA2Q06677 PET122YER153C 765 nt13.57□□□□□ -0.24
SWA2Q06677 SHR5YOL110W 714 nt13.52□□□□□ -0.25
SWA2Q06677 ARE1YCR048W 1833 nt13.41□□□□□ -0.26
SWA2Q06677 URN1YPR152C 1398 nt13.34□□□□□ -0.27
SWA2Q06677 SAH1YER043C 1350 nt13.26□□□□□ -0.29
SWA2Q06677 OPI9YLR338W 858 nt13.26□□□□□ -0.29
SWA2Q06677 POA1YBR022W 534 nt13.22□□□□□ -0.29
SWA2Q06677 DEP1YAL013W 1218 nt13.21□□□□□ -0.29
SWA2Q06677 YDJ1YNL064C 1230 nt13.21□□□□□ -0.29
SWA2Q06677 SCR1SCR1 522 nt13.21□□□□□ -0.29
SWA2Q06677 YHR049C-AYHR049C-A 297 nt13.17□□□□□ -0.3
SWA2Q06677 RRN5YLR141W 1092 nt13.11□□□□□ -0.31
SWA2Q06677 ATS1YAL020C 1002 nt13.07□□□□□ -0.32
SWA2Q06677 BSC6YOL137W 1494 nt13.04□□□□□ -0.32
SWA2Q06677 RPN10YHR200W 807 nt12.99□□□□□ -0.33
SWA2Q06677 YNL208WYNL208W 600 nt12.98□□□□□ -0.33
SWA2Q06677 SPT5YML010W 3192 nt12.92□□□□□ -0.34
SWA2Q06677 GAR1YHR089C 618 nt12.91□□□□□ -0.34
SWA2Q06677 YER088W-BYER088W-B 147 nt12.87□□□□□ -0.35
SWA2Q06677 PUN1YLR414C 792 nt12.83□□□□□ -0.36
SWA2Q06677 BUD23YCR047C 828 nt12.75□□□□□ -0.37
SWA2Q06677 PTC2YER089C 1395 nt12.75□□□□□ -0.37
SWA2Q06677 YJR018WYJR018W 363 nt12.69□□□□□ -0.38
SWA2Q06677 RSB1YOR049C 1065 nt12.66□□□□□ -0.38
SWA2Q06677 NAB2YGL122C 1578 nt12.63□□□□□ -0.39
SWA2Q06677 SSA1YAL005C 1929 nt12.62□□□□□ -0.39
SWA2Q06677 YJR120WYJR120W 351 nt12.59□□□□□ -0.39
SWA2Q06677 TIR1YER011W 765 nt12.53□□□□□ -0.4
SWA2Q06677 FIS1YIL065C 468 nt12.52□□□□□ -0.41
SWA2Q06677 SSA4YER103W 1929 nt12.49□□□□□ -0.41
SWA2Q06677 Q0182Q0182 405 nt12.48□□□□□ -0.41
SWA2Q06677 DAL1YIR027C 1383 nt12.4□□□□□ -0.42
SWA2Q06677 SRB2YHR041C 633 nt12.32□□□□□ -0.44
SWA2Q06677 PHO4YFR034C 939 nt12.31□□□□□ -0.44
SWA2Q06677 MEP2YNL142W 1500 nt12.3□□□□□ -0.44
SWA2Q06677 INM2YDR287W 879 nt12.27□□□□□ -0.45
SWA2Q06677 RPP2BYDR382W 333 nt12.27□□□□□ -0.45
SWA2Q06677 FPR4YLR449W 1179 nt12.26□□□□□ -0.45
SWA2Q06677 FPS1YLL043W 2010 nt12.26□□□□□ -0.45
SWA2Q06677 YPS1YLR120C 1710 nt12.23□□□□□ -0.45
SWA2Q06677 PST2YDR032C 597 nt12.21□□□□□ -0.45
SWA2Q06677 BDF1YLR399C 2061 nt12.12□□□□□ -0.47
SWA2Q06677 YBL100CYBL100C 315 nt12.12□□□□□ -0.47
SWA2Q06677 DCW1YKL046C 1350 nt12.12□□□□□ -0.47
SWA2Q06677 YDR095CYDR095C 411 nt12.1□□□□□ -0.47
SWA2Q06677 BDH2YAL061W 1254 nt12.06□□□□□ -0.48
SWA2Q06677 YHR165W-AYHR165W-A 312 nt12.01□□□□□ -0.49
SWA2Q06677 FUN26YAL022C 1554 nt11.98□□□□□ -0.49
SWA2Q06677 TAT1YBR069C 1860 nt11.94□□□□□ -0.5
SWA2Q06677 WWM1YFL010C 636 nt11.93□□□□□ -0.5
SWA2Q06677 PTP1YDL230W 1008 nt11.92□□□□□ -0.5
SWA2Q06677 EMI2YDR516C 1503 nt11.91□□□□□ -0.5
SWA2Q06677 NVJ2YPR091C 2313 nt11.87□□□□□ -0.51
SWA2Q06677 YBR220CYBR220C 1683 nt11.87□□□□□ -0.51
SWA2Q06677 CAC2YML102W 1407 nt11.86□□□□□ -0.51
SWA2Q06677 LSM3YLR438C-A 270 nt11.83□□□□□ -0.52
SWA2Q06677 TRM9YML014W 840 nt11.83□□□□□ -0.52
SWA2Q06677 CCT6YDR188W 1641 nt11.82□□□□□ -0.52
SWA2Q06677 RPP2AYOL039W 321 nt11.82□□□□□ -0.52
SWA2Q06677 YDL221WYDL221W 552 nt11.81□□□□□ -0.52
SWA2Q06677 SHU1YHL006C 453 nt11.79□□□□□ -0.52
SWA2Q06677 ALF1YNL148C 765 nt11.79□□□□□ -0.52
SWA2Q06677 SIS1YNL007C 1059 nt11.76□□□□□ -0.53
SWA2Q06677 YMR090WYMR090W 684 nt11.75□□□□□ -0.53
SWA2Q06677 SDH1YKL148C 1923 nt11.74□□□□□ -0.53
SWA2Q06677 YFL021C-AYFL021C-A 855 nt11.73□□□□□ -0.53
SWA2Q06677 HOM6YJR139C 1080 nt11.73□□□□□ -0.53
SWA2Q06677 YGR021WYGR021W 873 nt11.71□□□□□ -0.53
SWA2Q06677 PAC11YDR488C 1602 nt11.71□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms