RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR52, Length 92 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR52	snR52	FUM1	P08417	488 aa	Known RBP	0.43	□□□□□ -2.34
snR52	snR52	SEC63	P14906	663 aa		0.43	□□□□□ -2.34
snR52	snR52	SPO12	P17123	173 aa		0.43	□□□□□ -2.34
snR52	snR52	CTR86	P25355	563 aa		0.43	□□□□□ -2.34
snR52	snR52	SIN4	P32259	974 aa		0.43	□□□□□ -2.34
snR52	snR52	PPQ1	P32945	549 aa		0.43	□□□□□ -2.34
snR52	snR52	SLC1	P33333	303 aa		0.43	□□□□□ -2.34
snR52	snR52	RRP1	P35178	278 aa	Predicted RBP	0.43	□□□□□ -2.34
snR52	snR52	YHK8	P38776	514 aa		0.43	□□□□□ -2.34
snR52	snR52	DPH1	P40487	425 aa	Known RBP	0.43	□□□□□ -2.34
snR52	snR52	VMA13	P41807	478 aa	Known RBP	0.43	□□□□□ -2.34
snR52	snR52	GTR1	Q00582	310 aa		0.43	□□□□□ -2.34
snR52	snR52	BET5	Q03630	159 aa		0.43	□□□□□ -2.34
snR52	snR52	AVL9	Q12500	764 aa		0.43	□□□□□ -2.34
snR52	snR52	DPH5	P32469	300 aa	Predicted RBP	0.42	□□□□□ -2.34
snR52	snR52	NIP100	P33420	868 aa		0.42	□□□□□ -2.34
snR52	snR52	COX14	P39103	70 aa		0.42	□□□□□ -2.34
snR52	snR52	RGM1	Q00453	211 aa		0.42	□□□□□ -2.34
snR52	snR52	NGL3	Q03210	505 aa		0.42	□□□□□ -2.34
snR52	snR52	LDS2	Q08218	356 aa		0.42	□□□□□ -2.34
snR52	snR52	SRL2	Q12020	392 aa		0.42	□□□□□ -2.34
snR52	snR52	NOP58	Q12499	511 aa	Known RBP	0.42	□□□□□ -2.34
snR52	snR52	SSM4	P40318	1319 aa		0.41	□□□□□ -2.34
snR52	snR52	PHO84	P25297	587 aa	Known RBP	0.41	□□□□□ -2.34
snR52	snR52	MSP1	P28737	362 aa		0.41	□□□□□ -2.34
snR52	snR52	ALK2	P32789	676 aa	Predicted RBP	0.41	□□□□□ -2.34
snR52	snR52	MRE11	P32829	692 aa		0.41	□□□□□ -2.34
snR52	snR52	PFS1	P38872	237 aa		0.41	□□□□□ -2.34
snR52	snR52	KAP123	P40069	1113 aa	Known RBP	0.41	□□□□□ -2.34
snR52	snR52	SGN1	P40561	250 aa	Known RBP RIP-Chip data	0.41	□□□□□ -2.34	not detected
snR52	snR52	BAT2	P47176	376 aa	Known RBP	0.41	□□□□□ -2.34
snR52	snR52	BIO3	P50277	480 aa		0.41	□□□□□ -2.34
snR52	snR52	TDA1	Q03533	586 aa		0.41	□□□□□ -2.34
snR52	snR52	NMD4	Q12129	218 aa		0.41	□□□□□ -2.34
snR52	snR52	SKM1	Q12469	655 aa		0.41	□□□□□ -2.34
snR52	snR52	YJR112W-A	Q3E743	109 aa		0.41	□□□□□ -2.34
snR52	snR52	SNF6	P18888	332 aa		0.4	□□□□□ -2.35
snR52	snR52	CHS3	P29465	1165 aa		0.4	□□□□□ -2.35
snR52	snR52	RFC3	P38629	340 aa		0.4	□□□□□ -2.35
snR52	snR52	SAP185	P40856	1058 aa		0.4	□□□□□ -2.35
snR52	snR52	SAS2	P40963	338 aa		0.4	□□□□□ -2.35
snR52	snR52	HMS2	P47175	358 aa		0.4	□□□□□ -2.35
snR52	snR52	SEH1	P53011	349 aa	Known RBP	0.4	□□□□□ -2.35
snR52	snR52	YGR250C	P53316	781 aa	Known RBP	0.4	□□□□□ -2.35
snR52	snR52	INP2	Q03824	705 aa		0.4	□□□□□ -2.35
snR52	snR52	SMC5	Q08204	1093 aa		0.4	□□□□□ -2.35
snR52	snR52	SEC39	Q12745	709 aa		0.4	□□□□□ -2.35
snR52	snR52	YOR338W	Q99326	363 aa		0.4	□□□□□ -2.35
snR52	snR52	ADH3	P07246	375 aa	Known RBP	0.39	□□□□□ -2.35
snR52	snR52	FUS3	P16892	353 aa	Known RBP	0.39	□□□□□ -2.35
snR52	snR52	YHR054C	P38780	354 aa		0.39	□□□□□ -2.35
snR52	snR52	FLC2	P39719	783 aa		0.39	□□□□□ -2.35
snR52	snR52	LCB3	P47013	409 aa		0.39	□□□□□ -2.35
snR52	snR52	YJR008W	P47085	338 aa		0.39	□□□□□ -2.35
snR52	snR52	AIM24	P47127	394 aa		0.39	□□□□□ -2.35
snR52	snR52	YGR021W	P53212	290 aa		0.39	□□□□□ -2.35
snR52	snR52	COS1	P53822	381 aa		0.39	□□□□□ -2.35
snR52	snR52	VTI1	Q04338	217 aa		0.39	□□□□□ -2.35
snR52	snR52	YLR345W	Q06137	509 aa		0.39	□□□□□ -2.35
snR52	snR52	TPT1	Q12272	230 aa	Known RBP	0.39	□□□□□ -2.35
snR52	snR52	STE7	P06784	515 aa		0.38	□□□□□ -2.35
snR52	snR52	SPB1	P25582	841 aa	Predicted RBP	0.38	□□□□□ -2.35
snR52	snR52	COX13	P32799	129 aa		0.38	□□□□□ -2.35
snR52	snR52	YBL029W	P38201	376 aa		0.38	□□□□□ -2.35
snR52	snR52	PEX22	P39718	180 aa		0.38	□□□□□ -2.35
snR52	snR52	YIL059C	P40520	121 aa		0.38	□□□□□ -2.35
snR52	snR52	HAC1	P41546	238 aa		0.38	□□□□□ -2.35
snR52	snR52	VTC2	P43585	828 aa		0.38	□□□□□ -2.35
snR52	snR52	RMD9	P53140	646 aa	Known RBP	0.38	□□□□□ -2.35
snR52	snR52	YIF1	P53845	314 aa	Known RBP	0.38	□□□□□ -2.35
snR52	snR52	GPI15	P53961	229 aa		0.38	□□□□□ -2.35
snR52	snR52	DDC1	Q08949	612 aa		0.38	□□□□□ -2.35
snR52	snR52	FRE8	Q12209	686 aa		0.38	□□□□□ -2.35
snR52	snR52	AUS1	Q08409	1394 aa		0.37	□□□□□ -2.35
snR52	snR52	GAL80	P04387	435 aa		0.37	□□□□□ -2.35
snR52	snR52	RIP1	P08067	215 aa		0.37	□□□□□ -2.35
snR52	snR52	CDC16	P09798	840 aa		0.37	□□□□□ -2.35
snR52	snR52	YCL068C	P25593	260 aa		0.37	□□□□□ -2.35
snR52	snR52	RAD14	P28519	371 aa		0.37	□□□□□ -2.35
snR52	snR52	PDC2	P32896	925 aa		0.37	□□□□□ -2.35
snR52	snR52	TKL2	P33315	681 aa		0.37	□□□□□ -2.35
snR52	snR52	RRN3	P36070	627 aa		0.37	□□□□□ -2.35
snR52	snR52	SMP1	P38128	452 aa		0.37	□□□□□ -2.35
snR52	snR52	ECM34	P38728	170 aa		0.37	□□□□□ -2.35
snR52	snR52	YAL037W	P39728	267 aa		0.37	□□□□□ -2.35
snR52	snR52	VHS2	P40463	436 aa		0.37	□□□□□ -2.35
snR52	snR52	MAM33	P40513	266 aa		0.37	□□□□□ -2.35
snR52	snR52	MNN5	P46982	586 aa		0.37	□□□□□ -2.35
snR52	snR52	VMS1	Q04311	632 aa	Known RBP	0.37	□□□□□ -2.35
snR52	snR52	RPS23A	P0CX29	145 aa	Known RBP	0.36	□□□□□ -2.35
snR52	snR52	RPS23B	P0CX30	145 aa		0.36	□□□□□ -2.35
snR52	snR52	CMK2	P22517	447 aa		0.36	□□□□□ -2.35
snR52	snR52	ZIP1	P31111	875 aa		0.36	□□□□□ -2.35
snR52	snR52	TFB1	P32776	642 aa		0.36	□□□□□ -2.35
snR52	snR52	SEC66	P33754	206 aa		0.36	□□□□□ -2.35
snR52	snR52	SKT5	P34226	696 aa		0.36	□□□□□ -2.35
snR52	snR52	YBL081W	P38180	368 aa	Known RBP	0.36	□□□□□ -2.35
snR52	snR52	YNL208W	P40159	199 aa	Known RBP	0.36	□□□□□ -2.35
snR52	snR52	YJR011C	P47086	261 aa	Predicted RBP	0.36	□□□□□ -2.35
snR52	snR52	YGR149W	P48236	432 aa		0.36	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms