Protein–RNA interactions for Protein: P31111

ZIP1, Synaptonemal complex protein ZIP1, yeastyeast

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ZIP1P31111 NSR1YGR159C 1245 nt19.69■□□□□ 0.74
ZIP1P31111 YML009W-BYML009W-B 477 nt19.4■□□□□ 0.7
ZIP1P31111 NOP1YDL014W 984 nt18.7■□□□□ 0.58
ZIP1P31111 MDJ1YFL016C 1536 nt17.88■□□□□ 0.45
ZIP1P31111 YKL036CYKL036C 393 nt17.32■□□□□ 0.36
ZIP1P31111 Q0297Q0297 156 nt16.47■□□□□ 0.23
ZIP1P31111 YJL027CYJL027C 417 nt16.46■□□□□ 0.23
ZIP1P31111 SRX1YKL086W 384 nt16.4■□□□□ 0.22
ZIP1P31111 SCS3YGL126W 1143 nt15.78■□□□□ 0.12
ZIP1P31111 DBP2YNL112W 1641 nt15.67■□□□□ 0.1
ZIP1P31111 YCR051WYCR051W 669 nt15.46■□□□□ 0.07
ZIP1P31111 YBR190WYBR190W 312 nt15.38■□□□□ 0.05
ZIP1P31111 TRN1tP(UGG)A 72 nt15.05■□□□□ -0
ZIP1P31111 SUF9tP(UGG)F 72 nt15.05■□□□□ -0
ZIP1P31111 SUF8tP(UGG)H 72 nt15.05■□□□□ -0
ZIP1P31111 tP(UGG)LtP(UGG)L 72 nt15.05■□□□□ -0
ZIP1P31111 SUF7tP(UGG)M 72 nt15.05■□□□□ -0
ZIP1P31111 tP(UGG)N1tP(UGG)N1 72 nt15.05■□□□□ -0
ZIP1P31111 tP(UGG)N2tP(UGG)N2 72 nt15.05■□□□□ -0
ZIP1P31111 tP(UGG)O1tP(UGG)O1 72 nt15.05■□□□□ -0
ZIP1P31111 SUF11tP(UGG)O2 72 nt15.05■□□□□ -0
ZIP1P31111 YOL085CYOL085C 342 nt15.04■□□□□ -0
ZIP1P31111 RTC3YHR087W 336 nt14.98□□□□□ -0.01
ZIP1P31111 CCC1YLR220W 969 nt14.84□□□□□ -0.03
ZIP1P31111 RPP1BYDL130W 321 nt14.75□□□□□ -0.05
ZIP1P31111 PKP1YIL042C 1185 nt14.72□□□□□ -0.05
ZIP1P31111 SSA3YBL075C 1950 nt14.66□□□□□ -0.06
ZIP1P31111 RVS167YDR388W 1449 nt14.61□□□□□ -0.07
ZIP1P31111 SCJ1YMR214W 1134 nt14.47□□□□□ -0.09
ZIP1P31111 PUT4YOR348C 1884 nt14.32□□□□□ -0.12
ZIP1P31111 ATS1YAL020C 1002 nt14.16□□□□□ -0.14
ZIP1P31111 tP(UGG)O3tP(UGG)O3 72 nt14.08□□□□□ -0.16
ZIP1P31111 PET122YER153C 765 nt14.06□□□□□ -0.16
ZIP1P31111 SHR5YOL110W 714 nt14.02□□□□□ -0.17
ZIP1P31111 ARE1YCR048W 1833 nt13.92□□□□□ -0.18
ZIP1P31111 URN1YPR152C 1398 nt13.88□□□□□ -0.19
ZIP1P31111 SCR1SCR1 522 nt13.88□□□□□ -0.19
ZIP1P31111 POA1YBR022W 534 nt13.8□□□□□ -0.2
ZIP1P31111 SAH1YER043C 1350 nt13.79□□□□□ -0.2
ZIP1P31111 OPI9YLR338W 858 nt13.78□□□□□ -0.2
ZIP1P31111 YHR049C-AYHR049C-A 297 nt13.73□□□□□ -0.21
ZIP1P31111 DEP1YAL013W 1218 nt13.72□□□□□ -0.21
ZIP1P31111 RRN5YLR141W 1092 nt13.67□□□□□ -0.22
ZIP1P31111 YDJ1YNL064C 1230 nt13.64□□□□□ -0.23
ZIP1P31111 BSC6YOL137W 1494 nt13.61□□□□□ -0.23
ZIP1P31111 RPN10YHR200W 807 nt13.58□□□□□ -0.24
ZIP1P31111 YNL208WYNL208W 600 nt13.5□□□□□ -0.25
ZIP1P31111 YER088W-BYER088W-B 147 nt13.41□□□□□ -0.26
ZIP1P31111 PUN1YLR414C 792 nt13.38□□□□□ -0.27
ZIP1P31111 GAR1YHR089C 618 nt13.36□□□□□ -0.27
ZIP1P31111 SPT5YML010W 3192 nt13.35□□□□□ -0.27
ZIP1P31111 BUD23YCR047C 828 nt13.34□□□□□ -0.27
ZIP1P31111 RSB1YOR049C 1065 nt13.33□□□□□ -0.28
ZIP1P31111 PTC2YER089C 1395 nt13.27□□□□□ -0.29
ZIP1P31111 YJR018WYJR018W 363 nt13.21□□□□□ -0.29
ZIP1P31111 NAB2YGL122C 1578 nt13.17□□□□□ -0.3
ZIP1P31111 PST2YDR032C 597 nt13.15□□□□□ -0.3
ZIP1P31111 SSA4YER103W 1929 nt13.05□□□□□ -0.32
ZIP1P31111 FIS1YIL065C 468 nt12.98□□□□□ -0.33
ZIP1P31111 TIR1YER011W 765 nt12.95□□□□□ -0.34
ZIP1P31111 YJR120WYJR120W 351 nt12.95□□□□□ -0.34
ZIP1P31111 DAL1YIR027C 1383 nt12.92□□□□□ -0.34
ZIP1P31111 SSA1YAL005C 1929 nt12.9□□□□□ -0.35
ZIP1P31111 FPR4YLR449W 1179 nt12.84□□□□□ -0.35
ZIP1P31111 MEP2YNL142W 1500 nt12.83□□□□□ -0.36
ZIP1P31111 RPP2BYDR382W 333 nt12.82□□□□□ -0.36
ZIP1P31111 INM2YDR287W 879 nt12.8□□□□□ -0.36
ZIP1P31111 PHO4YFR034C 939 nt12.8□□□□□ -0.36
ZIP1P31111 YPS1YLR120C 1710 nt12.71□□□□□ -0.37
ZIP1P31111 SRB2YHR041C 633 nt12.61□□□□□ -0.39
ZIP1P31111 YBL100CYBL100C 315 nt12.61□□□□□ -0.39
ZIP1P31111 BDF1YLR399C 2061 nt12.61□□□□□ -0.39
ZIP1P31111 DCW1YKL046C 1350 nt12.6□□□□□ -0.39
ZIP1P31111 YDR095CYDR095C 411 nt12.58□□□□□ -0.4
ZIP1P31111 YHR165W-AYHR165W-A 312 nt12.57□□□□□ -0.4
ZIP1P31111 SHU1YHL006C 453 nt12.56□□□□□ -0.4
ZIP1P31111 YKL097CYKL097C 411 nt12.55□□□□□ -0.4
ZIP1P31111 BDH2YAL061W 1254 nt12.51□□□□□ -0.41
ZIP1P31111 FUN26YAL022C 1554 nt12.45□□□□□ -0.42
ZIP1P31111 TAT1YBR069C 1860 nt12.44□□□□□ -0.42
ZIP1P31111 EMI2YDR516C 1503 nt12.43□□□□□ -0.42
ZIP1P31111 YMR090WYMR090W 684 nt12.37□□□□□ -0.43
ZIP1P31111 YBR220CYBR220C 1683 nt12.36□□□□□ -0.43
ZIP1P31111 ALF1YNL148C 765 nt12.34□□□□□ -0.43
ZIP1P31111 PTP1YDL230W 1008 nt12.33□□□□□ -0.44
ZIP1P31111 YDL221WYDL221W 552 nt12.32□□□□□ -0.44
ZIP1P31111 TRM9YML014W 840 nt12.32□□□□□ -0.44
ZIP1P31111 RPP2AYOL039W 321 nt12.32□□□□□ -0.44
ZIP1P31111 WWM1YFL010C 636 nt12.3□□□□□ -0.44
ZIP1P31111 YAL037C-BYAL037C-B 975 nt12.3□□□□□ -0.44
ZIP1P31111 CAC2YML102W 1407 nt12.29□□□□□ -0.44
ZIP1P31111 LSM3YLR438C-A 270 nt12.27□□□□□ -0.45
ZIP1P31111 CCT6YDR188W 1641 nt12.26□□□□□ -0.45
ZIP1P31111 SDH1YKL148C 1923 nt12.25□□□□□ -0.45
ZIP1P31111 SIS1YNL007C 1059 nt12.2□□□□□ -0.46
ZIP1P31111 SUF2tP(AGG)C 72 nt12.17□□□□□ -0.46
ZIP1P31111 SUF10tP(AGG)N 72 nt12.17□□□□□ -0.46
ZIP1P31111 YGR021WYGR021W 873 nt12.16□□□□□ -0.46
ZIP1P31111 HOM6YJR139C 1080 nt12.16□□□□□ -0.46
ZIP1P31111 PAC11YDR488C 1602 nt12.15□□□□□ -0.47
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms