Protein–RNA interactions for Protein: P38872

PFS1, Prospore formation at selected spindle poles protein 1, yeastyeast

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFS1P38872 YML009W-BYML009W-B 477 nt20.26■□□□□ 0.83
PFS1P38872 NOP1YDL014W 984 nt19.79■□□□□ 0.76
PFS1P38872 NSR1YGR159C 1245 nt19.76■□□□□ 0.75
PFS1P38872 YKL036CYKL036C 393 nt18.62■□□□□ 0.57
PFS1P38872 YJL027CYJL027C 417 nt17.47■□□□□ 0.39
PFS1P38872 Q0297Q0297 156 nt17.45■□□□□ 0.38
PFS1P38872 SRX1YKL086W 384 nt17.3■□□□□ 0.36
PFS1P38872 MDJ1YFL016C 1536 nt17.26■□□□□ 0.35
PFS1P38872 SCS3YGL126W 1143 nt17.15■□□□□ 0.34
PFS1P38872 YCR051WYCR051W 669 nt16.47■□□□□ 0.23
PFS1P38872 YOL085CYOL085C 342 nt16.12■□□□□ 0.17
PFS1P38872 PKP1YIL042C 1185 nt15.86■□□□□ 0.13
PFS1P38872 RPP1BYDL130W 321 nt15.66■□□□□ 0.1
PFS1P38872 SCJ1YMR214W 1134 nt15.61■□□□□ 0.09
PFS1P38872 TRN1tP(UGG)A 72 nt15.45■□□□□ 0.06
PFS1P38872 SUF9tP(UGG)F 72 nt15.45■□□□□ 0.06
PFS1P38872 SUF8tP(UGG)H 72 nt15.45■□□□□ 0.06
PFS1P38872 tP(UGG)LtP(UGG)L 72 nt15.45■□□□□ 0.06
PFS1P38872 SUF7tP(UGG)M 72 nt15.45■□□□□ 0.06
PFS1P38872 tP(UGG)N1tP(UGG)N1 72 nt15.45■□□□□ 0.06
PFS1P38872 tP(UGG)N2tP(UGG)N2 72 nt15.45■□□□□ 0.06
PFS1P38872 tP(UGG)O1tP(UGG)O1 72 nt15.45■□□□□ 0.06
PFS1P38872 SUF11tP(UGG)O2 72 nt15.45■□□□□ 0.06
PFS1P38872 ATS1YAL020C 1002 nt15.42■□□□□ 0.06
PFS1P38872 DBP2YNL112W 1641 nt15.39■□□□□ 0.05
PFS1P38872 CCC1YLR220W 969 nt15.31■□□□□ 0.04
PFS1P38872 PET122YER153C 765 nt14.95□□□□□ -0.02
PFS1P38872 SCR1SCR1 522 nt14.87□□□□□ -0.03
PFS1P38872 tP(UGG)O3tP(UGG)O3 72 nt14.73□□□□□ -0.05
PFS1P38872 YBR190WYBR190W 312 nt14.57□□□□□ -0.08
PFS1P38872 RVS167YDR388W 1449 nt14.55□□□□□ -0.08
PFS1P38872 RRN5YLR141W 1092 nt14.54□□□□□ -0.08
PFS1P38872 RSB1YOR049C 1065 nt14.36□□□□□ -0.11
PFS1P38872 RTC3YHR087W 336 nt14.29□□□□□ -0.12
PFS1P38872 YER088W-BYER088W-B 147 nt14.26□□□□□ -0.13
PFS1P38872 YDJ1YNL064C 1230 nt14.23□□□□□ -0.13
PFS1P38872 PST2YDR032C 597 nt14.22□□□□□ -0.13
PFS1P38872 SHR5YOL110W 714 nt14.13□□□□□ -0.15
PFS1P38872 GAR1YHR089C 618 nt13.88□□□□□ -0.19
PFS1P38872 YKL097CYKL097C 411 nt13.87□□□□□ -0.19
PFS1P38872 DEP1YAL013W 1218 nt13.63□□□□□ -0.23
PFS1P38872 SHU1YHL006C 453 nt13.57□□□□□ -0.24
PFS1P38872 URN1YPR152C 1398 nt13.52□□□□□ -0.25
PFS1P38872 YNL208WYNL208W 600 nt13.43□□□□□ -0.26
PFS1P38872 TIR1YER011W 765 nt13.39□□□□□ -0.27
PFS1P38872 RPN10YHR200W 807 nt13.39□□□□□ -0.27
PFS1P38872 YAL037C-BYAL037C-B 975 nt13.26□□□□□ -0.29
PFS1P38872 YOR139CYOR139C 393 nt13.25□□□□□ -0.29
PFS1P38872 OPI9YLR338W 858 nt13.23□□□□□ -0.29
PFS1P38872 SSA1YAL005C 1929 nt13.16□□□□□ -0.3
PFS1P38872 SAH1YER043C 1350 nt13.07□□□□□ -0.32
PFS1P38872 NPL3YDR432W 1245 nt13.06□□□□□ -0.32
PFS1P38872 SRB2YHR041C 633 nt13.03□□□□□ -0.32
PFS1P38872 PUT4YOR348C 1884 nt12.96□□□□□ -0.33
PFS1P38872 MNP1YGL068W 585 nt12.91□□□□□ -0.34
PFS1P38872 YJR018WYJR018W 363 nt12.91□□□□□ -0.34
PFS1P38872 YGR021WYGR021W 873 nt12.9□□□□□ -0.34
PFS1P38872 WWM1YFL010C 636 nt12.88□□□□□ -0.35
PFS1P38872 HOM6YJR139C 1080 nt12.88□□□□□ -0.35
PFS1P38872 PUN1YLR414C 792 nt12.85□□□□□ -0.35
PFS1P38872 ARE1YCR048W 1833 nt12.85□□□□□ -0.35
PFS1P38872 YJR120WYJR120W 351 nt12.81□□□□□ -0.36
PFS1P38872 YOL037CYOL037C 354 nt12.8□□□□□ -0.36
PFS1P38872 SSA3YBL075C 1950 nt12.76□□□□□ -0.37
PFS1P38872 RPP2BYDR382W 333 nt12.75□□□□□ -0.37
PFS1P38872 tM(CAU)CtM(CAU)C 72 nt12.7□□□□□ -0.38
PFS1P38872 IMT4tM(CAU)E 72 nt12.7□□□□□ -0.38
PFS1P38872 IMT3tM(CAU)J3 72 nt12.7□□□□□ -0.38
PFS1P38872 IMT1tM(CAU)O1 72 nt12.7□□□□□ -0.38
PFS1P38872 IMT2tM(CAU)P 72 nt12.7□□□□□ -0.38
PFS1P38872 YHR049C-AYHR049C-A 297 nt12.7□□□□□ -0.38
PFS1P38872 RKM5YLR137W 1104 nt12.7□□□□□ -0.38
PFS1P38872 YFL021C-AYFL021C-A 855 nt12.65□□□□□ -0.38
PFS1P38872 PTC2YER089C 1395 nt12.64□□□□□ -0.39
PFS1P38872 POA1YBR022W 534 nt12.59□□□□□ -0.39
PFS1P38872 BDH2YAL061W 1254 nt12.56□□□□□ -0.4
PFS1P38872 PUS2YGL063W 1113 nt12.48□□□□□ -0.41
PFS1P38872 YLR281CYLR281C 468 nt12.46□□□□□ -0.41
PFS1P38872 BUD23YCR047C 828 nt12.44□□□□□ -0.42
PFS1P38872 LSM3YLR438C-A 270 nt12.43□□□□□ -0.42
PFS1P38872 NAB2YGL122C 1578 nt12.41□□□□□ -0.42
PFS1P38872 INM2YDR287W 879 nt12.38□□□□□ -0.43
PFS1P38872 WHI5YOR083W 888 nt12.38□□□□□ -0.43
PFS1P38872 YBL100CYBL100C 315 nt12.36□□□□□ -0.43
PFS1P38872 MOT3YMR070W 1473 nt12.35□□□□□ -0.43
PFS1P38872 DAL1YIR027C 1383 nt12.33□□□□□ -0.44
PFS1P38872 FPR4YLR449W 1179 nt12.33□□□□□ -0.44
PFS1P38872 FIS1YIL065C 468 nt12.3□□□□□ -0.44
PFS1P38872 TRM9YML014W 840 nt12.25□□□□□ -0.45
PFS1P38872 BSC6YOL137W 1494 nt12.25□□□□□ -0.45
PFS1P38872 PHO4YFR034C 939 nt12.22□□□□□ -0.45
PFS1P38872 FUN26YAL022C 1554 nt12.22□□□□□ -0.45
PFS1P38872 FMP45YDL222C 930 nt12.19□□□□□ -0.46
PFS1P38872 DSK2YMR276W 1122 nt12.17□□□□□ -0.46
PFS1P38872 YPR011CYPR011C 981 nt12.17□□□□□ -0.46
PFS1P38872 YLR236CYLR236C 324 nt12.14□□□□□ -0.47
PFS1P38872 YLR154C-GYLR154C-G 150 nt12.11□□□□□ -0.47
PFS1P38872 CCT6YDR188W 1641 nt12.11□□□□□ -0.47
PFS1P38872 IMP2'YIL154C 1041 nt12.08□□□□□ -0.48
PFS1P38872 YCH1YGR203W 447 nt12.06□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 6.6 ms