RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR52, Length 92 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR52snR52 MTC1P47018 478 aaKnown RBP9.27□□□□□ -0.93
snR52snR52 FAP1P53971 965 aa8.84□□□□□ -0.99
snR52snR52 PRY3P47033 881 aa8.36□□□□□ -1.07
snR52snR52 PRI1P10363 409 aa8.16□□□□□ -1.1
snR52snR52 AAD16Q02895 342 aa8.13□□□□□ -1.11
snR52snR52 YCK3P39962 524 aa8.07□□□□□ -1.12
snR52snR52 DRS1P32892 752 aaKnown RBP7.97□□□□□ -1.13
snR52snR52 HAA1Q12753 694 aaKnown RBP7.89□□□□□ -1.15
snR52snR52 ISW2Q08773 1120 aa7.75□□□□□ -1.17
snR52snR52 RPG1P38249 964 aaKnown RBP7.68□□□□□ -1.18
snR52snR52 TSR3Q12094 313 aaKnown RBP7.59□□□□□ -1.19
snR52snR52 MRPL32P25348 183 aa7.29□□□□□ -1.24
snR52snR52 DIP2Q12220 943 aaPredicted RBP7.22□□□□□ -1.25
snR52snR52 YGL015CP33199 130 aa7.19□□□□□ -1.26
snR52snR52 RSE1Q04693 1361 aaKnown RBP7.16□□□□□ -1.26
snR52snR52 RPL17AP05740 184 aaKnown RBP6.95□□□□□ -1.3
snR52snR52 RPL17BP46990 184 aaKnown RBP6.95□□□□□ -1.3
snR52snR52 REB1P21538 810 aa6.93□□□□□ -1.3
snR52snR52 BUD31P25337 157 aaPredicted RBP6.91□□□□□ -1.3
snR52snR52 AVT3P36062 692 aa6.89□□□□□ -1.31
snR52snR52 CDC27P38042 758 aa6.89□□□□□ -1.31
snR52snR52 UBP10P53874 792 aaPredicted RBP6.81□□□□□ -1.32
snR52snR52 YKR023WP36119 530 aaKnown RBP6.75□□□□□ -1.33
snR52snR52 SPT21P35209 758 aa6.74□□□□□ -1.33
snR52snR52 MAP2P38174 421 aaKnown RBP6.72□□□□□ -1.33
snR52snR52 TFC8Q12308 588 aa6.6□□□□□ -1.35
snR52snR52 HOP09932 586 aa6.52□□□□□ -1.37
snR52snR52 DCD1P06773 312 aa6.51□□□□□ -1.37
snR52snR52 TGL3P40308 642 aa6.5□□□□□ -1.37
snR52snR52 TIF4632P39936 914 aaKnown RBP6.45□□□□□ -1.38
snR52snR52 SCY1P53009 804 aa6.45□□□□□ -1.38
snR52snR52 SLX5P32828 619 aaKnown RBP6.43□□□□□ -1.38
snR52snR52 SIS1P25294 352 aaKnown RBP6.41□□□□□ -1.38
snR52snR52 UBP9P39967 754 aa6.41□□□□□ -1.38
snR52snR52 RIM101P33400 625 aa6.35□□□□□ -1.39
snR52snR52 BCH2P36122 765 aa6.34□□□□□ -1.39
snR52snR52 BFR2Q06631 534 aaKnown RBP6.34□□□□□ -1.39
snR52snR52 MST1P07236 462 aa6.23□□□□□ -1.41
snR52snR52 NSR1P27476 414 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
snR52snR52 BDF1P35817 686 aa6.14□□□□□ -1.43
snR52snR52 EPS1P40557 701 aa6.14□□□□□ -1.43
snR52snR52 YBL029C-AQ3E756 94 aa6.1□□□□□ -1.43
snR52snR52 OXP1P28273 1286 aa6.09□□□□□ -1.43
snR52snR52 YOR238WQ08634 303 aa6.07□□□□□ -1.44
snR52snR52 VNX1P42839 908 aa6.05□□□□□ -1.44
snR52snR52 AIR2Q12476 344 aaKnown RBP5.97□□□□□ -1.45
snR52snR52 FKH1P40466 484 aa5.96□□□□□ -1.46
snR52snR52 YAP5P40574 245 aa5.95□□□□□ -1.46
snR52snR52 SPP1Q03012 353 aa5.94□□□□□ -1.46
snR52snR52 TIF11P38912 153 aaKnown RBP5.9□□□□□ -1.46
snR52snR52 PTP3P40048 928 aa5.9□□□□□ -1.46
snR52snR52 YIL055CP40523 627 aaKnown RBP5.88□□□□□ -1.47
snR52snR52 BBC1P47068 1157 aa5.88□□□□□ -1.47
snR52snR52 RSM7P47150 247 aa5.88□□□□□ -1.47
snR52snR52 AI2P03876 854 aa5.87□□□□□ -1.47
snR52snR52 WSC3Q12215 556 aa5.86□□□□□ -1.47
snR52snR52 IOC2Q12072 812 aa5.82□□□□□ -1.48
snR52snR52 YJL171CP46992 396 aa5.81□□□□□ -1.48
snR52snR52 LDB19Q12502 818 aa5.79□□□□□ -1.48
snR52snR52 GTT3P39996 337 aa5.77□□□□□ -1.49
snR52snR52 ULI1P43604 169 aa5.75□□□□□ -1.49
snR52snR52 BMT6Q12291 365 aa5.74□□□□□ -1.49
snR52snR52 MSB4Q12317 492 aa5.73□□□□□ -1.49
snR52snR52 PSD2P53037 1138 aaKnown RBP5.72□□□□□ -1.49
snR52snR52 YLR271WQ06152 274 aa5.7□□□□□ -1.5
snR52snR52 YAH1Q12184 172 aaKnown RBP5.69□□□□□ -1.5
snR52snR52 EAP1P36041 632 aaKnown RBP5.68□□□□□ -1.5
snR52snR52 PIB1Q06651 286 aa5.64□□□□□ -1.51
snR52snR52 YOL036WQ08206 761 aa5.64□□□□□ -1.51
snR52snR52 RTG1P32607 177 aa5.63□□□□□ -1.51
snR52snR52 TRP5P00931 707 aaKnown RBP5.62□□□□□ -1.51
snR52snR52 SEC61P32915 480 aa5.61□□□□□ -1.51
snR52snR52 MRM1P25270 412 aa5.6□□□□□ -1.51
snR52snR52 YNL035CP53962 389 aaKnown RBP5.59□□□□□ -1.51
snR52snR52 SAM3Q08986 587 aa5.59□□□□□ -1.51
snR52snR52 NCR1Q12200 1170 aa5.59□□□□□ -1.51
snR52snR52 SET4P42948 560 aa5.58□□□□□ -1.52
snR52snR52 VPS29P38759 282 aa5.57□□□□□ -1.52
snR52snR52 YMR1P47147 688 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
snR52snR52 VMA1P17255 1071 aaKnown RBP5.55□□□□□ -1.52
snR52snR52 DAN4P47179 1161 aa5.53□□□□□ -1.52
snR52snR52 DBP1P24784 617 aaKnown RBP5.52□□□□□ -1.53
snR52snR52 STS1P38637 319 aa5.52□□□□□ -1.53
snR52snR52 BCK2P33306 851 aa5.49□□□□□ -1.53
snR52snR52 JIP4Q03361 876 aa5.49□□□□□ -1.53
snR52snR52 ABP1P15891 592 aaKnown RBP5.48□□□□□ -1.53
snR52snR52 TFA1P36100 482 aa5.48□□□□□ -1.53
snR52snR52 CHL1P22516 861 aaPredicted RBP5.46□□□□□ -1.54
snR52snR52 RTG3P38165 486 aa5.46□□□□□ -1.54
snR52snR52 YFR006WP43590 535 aa5.46□□□□□ -1.54
snR52snR52 YDL129WQ07555 291 aa5.46□□□□□ -1.54
snR52snR52 SSP1P38871 571 aa5.45□□□□□ -1.54
snR52snR52 CST9Q06032 482 aa5.45□□□□□ -1.54
snR52snR52 SAP30P38429 201 aa5.44□□□□□ -1.54
snR52snR52 PRE3P38624 215 aa5.44□□□□□ -1.54
snR52snR52 ARP8Q12386 881 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
snR52snR52 TFG1P41895 735 aaPredicted RBP5.42□□□□□ -1.54
snR52snR52 MGA2P40578 1113 aa5.4□□□□□ -1.54
snR52snR52 GYP5Q12344 894 aa5.39□□□□□ -1.55
snR52snR52 HTA1P04911 132 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms