Protein–RNA interactions for Protein: P38629

RFC3, Replication factor C subunit 3, yeastyeast

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC3P38629 NSR1YGR159C 1245 nt19.99■□□□□ 0.79
RFC3P38629 YML009W-BYML009W-B 477 nt19.7■□□□□ 0.74
RFC3P38629 NOP1YDL014W 984 nt18.88■□□□□ 0.61
RFC3P38629 MDJ1YFL016C 1536 nt18.33■□□□□ 0.52
RFC3P38629 YKL036CYKL036C 393 nt16.97■□□□□ 0.31
RFC3P38629 YJL027CYJL027C 417 nt16.81■□□□□ 0.28
RFC3P38629 SRX1YKL086W 384 nt16.52■□□□□ 0.24
RFC3P38629 Q0297Q0297 156 nt16.39■□□□□ 0.21
RFC3P38629 DBP2YNL112W 1641 nt16■□□□□ 0.15
RFC3P38629 YBR190WYBR190W 312 nt15.7■□□□□ 0.1
RFC3P38629 YCR051WYCR051W 669 nt15.64■□□□□ 0.09
RFC3P38629 RTC3YHR087W 336 nt15.33■□□□□ 0.04
RFC3P38629 TRN1tP(UGG)A 72 nt15.28■□□□□ 0.04
RFC3P38629 SUF9tP(UGG)F 72 nt15.28■□□□□ 0.04
RFC3P38629 SUF8tP(UGG)H 72 nt15.28■□□□□ 0.04
RFC3P38629 tP(UGG)LtP(UGG)L 72 nt15.28■□□□□ 0.04
RFC3P38629 SUF7tP(UGG)M 72 nt15.28■□□□□ 0.04
RFC3P38629 tP(UGG)N1tP(UGG)N1 72 nt15.28■□□□□ 0.04
RFC3P38629 tP(UGG)N2tP(UGG)N2 72 nt15.28■□□□□ 0.04
RFC3P38629 tP(UGG)O1tP(UGG)O1 72 nt15.28■□□□□ 0.04
RFC3P38629 SUF11tP(UGG)O2 72 nt15.28■□□□□ 0.04
RFC3P38629 SCS3YGL126W 1143 nt15.2■□□□□ 0.02
RFC3P38629 CCC1YLR220W 969 nt15.12■□□□□ 0.01
RFC3P38629 SSA3YBL075C 1950 nt15.02□□□□□ -0.01
RFC3P38629 RVS167YDR388W 1449 nt14.84□□□□□ -0.03
RFC3P38629 SCJ1YMR214W 1134 nt14.77□□□□□ -0.05
RFC3P38629 YOL085CYOL085C 342 nt14.73□□□□□ -0.05
RFC3P38629 RPP1BYDL130W 321 nt14.71□□□□□ -0.05
RFC3P38629 PUT4YOR348C 1884 nt14.71□□□□□ -0.05
RFC3P38629 PKP1YIL042C 1185 nt14.6□□□□□ -0.07
RFC3P38629 ARE1YCR048W 1833 nt14.28□□□□□ -0.12
RFC3P38629 tP(UGG)O3tP(UGG)O3 72 nt14.27□□□□□ -0.13
RFC3P38629 SHR5YOL110W 714 nt14.23□□□□□ -0.13
RFC3P38629 POA1YBR022W 534 nt14.2□□□□□ -0.14
RFC3P38629 URN1YPR152C 1398 nt14.18□□□□□ -0.14
RFC3P38629 PET122YER153C 765 nt14.15□□□□□ -0.14
RFC3P38629 SAH1YER043C 1350 nt14.14□□□□□ -0.15
RFC3P38629 YHR049C-AYHR049C-A 297 nt14.11□□□□□ -0.15
RFC3P38629 OPI9YLR338W 858 nt14.07□□□□□ -0.16
RFC3P38629 DEP1YAL013W 1218 nt14.05□□□□□ -0.16
RFC3P38629 BSC6YOL137W 1494 nt14□□□□□ -0.17
RFC3P38629 RPN10YHR200W 807 nt13.8□□□□□ -0.2
RFC3P38629 YDJ1YNL064C 1230 nt13.79□□□□□ -0.2
RFC3P38629 SCR1SCR1 522 nt13.78□□□□□ -0.2
RFC3P38629 SPT5YML010W 3192 nt13.75□□□□□ -0.21
RFC3P38629 BUD23YCR047C 828 nt13.72□□□□□ -0.21
RFC3P38629 YNL208WYNL208W 600 nt13.72□□□□□ -0.21
RFC3P38629 RRN5YLR141W 1092 nt13.67□□□□□ -0.22
RFC3P38629 PUN1YLR414C 792 nt13.64□□□□□ -0.23
RFC3P38629 PTC2YER089C 1395 nt13.59□□□□□ -0.23
RFC3P38629 GAR1YHR089C 618 nt13.59□□□□□ -0.23
RFC3P38629 SSA4YER103W 1929 nt13.51□□□□□ -0.25
RFC3P38629 YJR018WYJR018W 363 nt13.48□□□□□ -0.25
RFC3P38629 NAB2YGL122C 1578 nt13.46□□□□□ -0.25
RFC3P38629 ATS1YAL020C 1002 nt13.42□□□□□ -0.26
RFC3P38629 YER088W-BYER088W-B 147 nt13.4□□□□□ -0.26
RFC3P38629 FIS1YIL065C 468 nt13.29□□□□□ -0.28
RFC3P38629 YJR120WYJR120W 351 nt13.24□□□□□ -0.29
RFC3P38629 RSB1YOR049C 1065 nt13.22□□□□□ -0.29
RFC3P38629 DAL1YIR027C 1383 nt13.2□□□□□ -0.3
RFC3P38629 MEP2YNL142W 1500 nt13.18□□□□□ -0.3
RFC3P38629 FPR4YLR449W 1179 nt13.16□□□□□ -0.3
RFC3P38629 TIR1YER011W 765 nt13.15□□□□□ -0.3
RFC3P38629 SSA1YAL005C 1929 nt13.13□□□□□ -0.31
RFC3P38629 PHO4YFR034C 939 nt13.1□□□□□ -0.31
RFC3P38629 BDF1YLR399C 2061 nt13.04□□□□□ -0.32
RFC3P38629 INM2YDR287W 879 nt13.03□□□□□ -0.32
RFC3P38629 RPP2BYDR382W 333 nt13.03□□□□□ -0.32
RFC3P38629 YPS1YLR120C 1710 nt13.02□□□□□ -0.33
RFC3P38629 DCW1YKL046C 1350 nt13.01□□□□□ -0.33
RFC3P38629 YHR165W-AYHR165W-A 312 nt12.9□□□□□ -0.34
RFC3P38629 SRB2YHR041C 633 nt12.88□□□□□ -0.35
RFC3P38629 YBL100CYBL100C 315 nt12.87□□□□□ -0.35
RFC3P38629 YDR095CYDR095C 411 nt12.86□□□□□ -0.35
RFC3P38629 TAT1YBR069C 1860 nt12.86□□□□□ -0.35
RFC3P38629 EMI2YDR516C 1503 nt12.79□□□□□ -0.36
RFC3P38629 YBR220CYBR220C 1683 nt12.73□□□□□ -0.37
RFC3P38629 BDH2YAL061W 1254 nt12.71□□□□□ -0.37
RFC3P38629 FUN26YAL022C 1554 nt12.7□□□□□ -0.38
RFC3P38629 YMR090WYMR090W 684 nt12.67□□□□□ -0.38
RFC3P38629 YDL221WYDL221W 552 nt12.65□□□□□ -0.38
RFC3P38629 PTP1YDL230W 1008 nt12.65□□□□□ -0.38
RFC3P38629 CAC2YML102W 1407 nt12.64□□□□□ -0.39
RFC3P38629 ALF1YNL148C 765 nt12.6□□□□□ -0.39
RFC3P38629 RPP2AYOL039W 321 nt12.6□□□□□ -0.39
RFC3P38629 SDH1YKL148C 1923 nt12.59□□□□□ -0.39
RFC3P38629 TRM9YML014W 840 nt12.54□□□□□ -0.4
RFC3P38629 PST2YDR032C 597 nt12.52□□□□□ -0.41
RFC3P38629 WWM1YFL010C 636 nt12.51□□□□□ -0.41
RFC3P38629 CCT6YDR188W 1641 nt12.47□□□□□ -0.41
RFC3P38629 IRC15YPL017C 1500 nt12.47□□□□□ -0.41
RFC3P38629 SIS1YNL007C 1059 nt12.44□□□□□ -0.42
RFC3P38629 SCC4YER147C 1875 nt12.44□□□□□ -0.42
RFC3P38629 LSM3YLR438C-A 270 nt12.42□□□□□ -0.42
RFC3P38629 GIS3YLR094C 1509 nt12.37□□□□□ -0.43
RFC3P38629 SUF2tP(AGG)C 72 nt12.36□□□□□ -0.43
RFC3P38629 SUF10tP(AGG)N 72 nt12.36□□□□□ -0.43
RFC3P38629 PCH2YBR186W 1695 nt12.35□□□□□ -0.43
RFC3P38629 GFD2YCL036W 1701 nt12.34□□□□□ -0.43
RFC3P38629 ART5YGR068C 1761 nt12.32□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms