RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W VHC1P38329 1120 aa1.3□□□□□ -2.2
SPT21YMR179W YHR131CP38835 850 aa1.3□□□□□ -2.2
SPT21YMR179W TFG2P41896 400 aaPredicted RBP1.3□□□□□ -2.2
SPT21YMR179W YJL055WP47044 245 aa1.3□□□□□ -2.2
SPT21YMR179W YGR111WP53265 400 aa1.3□□□□□ -2.2
SPT21YMR179W RPT4P53549 437 aaKnown RBP1.3□□□□□ -2.2
SPT21YMR179W KTR5P53966 522 aaPredicted RBP1.3□□□□□ -2.2
SPT21YMR179W HOT1Q03213 719 aa1.3□□□□□ -2.2
SPT21YMR179W ACL4Q03771 387 aa1.3□□□□□ -2.2
SPT21YMR179W MMR1Q06324 491 aa1.3□□□□□ -2.2
SPT21YMR179W IRC25Q07951 179 aa1.3□□□□□ -2.2
SPT21YMR179W MUM3Q08750 479 aa1.3□□□□□ -2.2
SPT21YMR179W VPS54Q12071 889 aa1.3□□□□□ -2.2
SPT21YMR179W SPE3Q12074 293 aaKnown RBP1.3□□□□□ -2.2
SPT21YMR179W RIP1P08067 215 aa1.29□□□□□ -2.2
SPT21YMR179W URA4P20051 364 aa1.29□□□□□ -2.2
SPT21YMR179W BRF1P29056 596 aa1.29□□□□□ -2.2
SPT21YMR179W HIR2P32480 875 aa1.29□□□□□ -2.2
SPT21YMR179W VPH1P32563 840 aaKnown RBP1.29□□□□□ -2.2
SPT21YMR179W ARA1P38115 344 aa1.29□□□□□ -2.2
SPT21YMR179W SER3P40054 469 aa1.29□□□□□ -2.2
SPT21YMR179W SEC28P40509 296 aaKnown RBP1.29□□□□□ -2.2
SPT21YMR179W EFM4P40516 257 aa1.29□□□□□ -2.2
SPT21YMR179W IGO1P53897 168 aa1.29□□□□□ -2.2
SPT21YMR179W YMR130WQ04223 302 aa1.29□□□□□ -2.2
SPT21YMR179W UAF30Q08747 228 aa1.29□□□□□ -2.2
SPT21YMR179W TIM18Q08749 192 aa1.29□□□□□ -2.2
SPT21YMR179W YPR022CQ12139 1133 aa1.29□□□□□ -2.2
SPT21YMR179W PKH2Q12236 1081 aaKnown RBP1.29□□□□□ -2.2
SPT21YMR179W VAM3Q12241 283 aa1.29□□□□□ -2.2
SPT21YMR179W RPN5Q12250 445 aaKnown RBP1.29□□□□□ -2.2
SPT21YMR179W HSP42Q12329 375 aa1.29□□□□□ -2.2
SPT21YMR179W SEC63P14906 663 aa1.29□□□□□ -2.2
SPT21YMR179W CLN1P20437 546 aa1.29□□□□□ -2.2
SPT21YMR179W GEX1P25596 615 aa1.29□□□□□ -2.2
SPT21YMR179W KRE2P27809 442 aa1.29□□□□□ -2.2
SPT21YMR179W PRP21P32524 280 aaPredicted RBP1.29□□□□□ -2.2
SPT21YMR179W GYP6P32806 458 aa1.29□□□□□ -2.2
SPT21YMR179W LTV1P34078 463 aa1.29□□□□□ -2.2
SPT21YMR179W CBP4P37267 147 aa1.29□□□□□ -2.2
SPT21YMR179W YHR054CP38780 354 aa1.29□□□□□ -2.2
SPT21YMR179W RPS0BP46654 252 aaKnown RBP1.29□□□□□ -2.2
SPT21YMR179W MDM30Q05930 598 aa1.29□□□□□ -2.2
SPT21YMR179W DCI1Q08558 271 aa1.29□□□□□ -2.2
SPT21YMR179W RPL1AP0CX43 217 aaKnown RBP1.28□□□□□ -2.2
SPT21YMR179W RPL1BP0CX44 217 aaKnown RBP1.28□□□□□ -2.2
SPT21YMR179W SPO7P18410 259 aa1.28□□□□□ -2.2
SPT21YMR179W POP5P28005 173 aa1.28□□□□□ -2.2
SPT21YMR179W BEM1P29366 551 aa1.28□□□□□ -2.2
SPT21YMR179W SIN4P32259 974 aa1.28□□□□□ -2.2
SPT21YMR179W PUP2P32379 260 aa1.28□□□□□ -2.2
SPT21YMR179W REC114P32841 428 aa1.28□□□□□ -2.2
SPT21YMR179W HEL1P36113 551 aa1.28□□□□□ -2.2
SPT21YMR179W MMS4P38257 691 aa1.28□□□□□ -2.2
SPT21YMR179W RFC3P38629 340 aa1.28□□□□□ -2.2
SPT21YMR179W CCT2P39076 527 aaKnown RBP1.28□□□□□ -2.2
SPT21YMR179W CAJ1P39101 391 aa1.28□□□□□ -2.2
SPT21YMR179W SAS2P40963 338 aa1.28□□□□□ -2.2
SPT21YMR179W ECM27P47144 725 aa1.28□□□□□ -2.2
SPT21YMR179W TOM22P49334 152 aa1.28□□□□□ -2.2
SPT21YMR179W PCP1P53259 346 aa1.28□□□□□ -2.2
SPT21YMR179W NCS2P53923 493 aaPredicted RBP1.28□□□□□ -2.2
SPT21YMR179W DCS1Q06151 350 aa1.28□□□□□ -2.2
SPT21YMR179W DIS3Q08162 1001 aaKnown RBP1.28□□□□□ -2.2
SPT21YMR179W RKM1Q08961 583 aaPredicted RBP1.28□□□□□ -2.2
SPT21YMR179W AEP3Q12089 606 aa1.28□□□□□ -2.2
SPT21YMR179W ARO3P14843 370 aaKnown RBP1.28□□□□□ -2.2
SPT21YMR179W SLY1P22213 666 aa1.28□□□□□ -2.2
SPT21YMR179W RHB1P25378 209 aa1.28□□□□□ -2.2
SPT21YMR179W CSE2P33308 149 aa1.28□□□□□ -2.2
SPT21YMR179W AIM10P39965 576 aaKnown RBP1.28□□□□□ -2.2
SPT21YMR179W VHS2P40463 436 aa1.28□□□□□ -2.2
SPT21YMR179W YJR011CP47086 261 aaPredicted RBP1.28□□□□□ -2.2
SPT21YMR179W YGR016WP53209 190 aa1.28□□□□□ -2.2
SPT21YMR179W YNR048WP53740 393 aa1.28□□□□□ -2.2
SPT21YMR179W HSP31Q04432 237 aa1.28□□□□□ -2.2
SPT21YMR179W SNX3Q08826 162 aaKnown RBP1.28□□□□□ -2.2
SPT21YMR179W PLP2Q12017 286 aa1.28□□□□□ -2.2
SPT21YMR179W MED2Q12124 431 aa1.28□□□□□ -2.2
SPT21YMR179W FRE6Q12473 712 aa1.28□□□□□ -2.2
SPT21YMR179W MTR10Q99189 972 aa1.28□□□□□ -2.2
SPT21YMR179W SPT7P35177 1332 aa1.27□□□□□ -2.21
SPT21YMR179W YLR278CQ05854 1341 aa1.27□□□□□ -2.21
SPT21YMR179W TY1B-AO13527 1196 aaKnown RBP1.27□□□□□ -2.21
SPT21YMR179W ECM25P32525 599 aa1.27□□□□□ -2.21
SPT21YMR179W SOR1P35497 357 aaKnown RBP1.27□□□□□ -2.21
SPT21YMR179W ZTA1P38230 334 aaKnown RBP1.27□□□□□ -2.21
SPT21YMR179W SEO1P39709 593 aa1.27□□□□□ -2.21
SPT21YMR179W YIF1P53845 314 aaKnown RBP1.27□□□□□ -2.21
SPT21YMR179W DSL1P53847 754 aa1.27□□□□□ -2.21
SPT21YMR179W RHO5P53879 331 aaKnown RBP1.27□□□□□ -2.21
SPT21YMR179W OCA2P53949 197 aa1.27□□□□□ -2.21
SPT21YMR179W YDR387CQ04162 555 aa1.27□□□□□ -2.21
SPT21YMR179W YLR456WQ06199 204 aa1.27□□□□□ -2.21
SPT21YMR179W SOR2Q07786 357 aa1.27□□□□□ -2.21
SPT21YMR179W IES4Q08561 116 aa1.27□□□□□ -2.21
SPT21YMR179W SMF3Q12078 473 aaPredicted RBP1.27□□□□□ -2.21
SPT21YMR179W NFI1Q12216 726 aa1.27□□□□□ -2.21
SPT21YMR179W AHC1Q12433 566 aa1.27□□□□□ -2.21
SPT21YMR179W SKS1Q12505 502 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms