RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C KAP120Q02932 1032 aa3.52□□□□□ -1.85
RPF2YKR081C DON1Q05610 365 aa3.52□□□□□ -1.85
RPF2YKR081C SCM3Q12334 223 aa3.52□□□□□ -1.85
RPF2YKR081C YRF1-4O13559 1382 aa3.51□□□□□ -1.85
RPF2YKR081C NAM2P11325 894 aa3.51□□□□□ -1.85
RPF2YKR081C HSP26P15992 214 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
RPF2YKR081C MRP21P38175 177 aa3.51□□□□□ -1.85
RPF2YKR081C RRN10P38204 145 aa3.51□□□□□ -1.85
RPF2YKR081C YHR131CP38835 850 aa3.51□□□□□ -1.85
RPF2YKR081C AIM10P39965 576 aaKnown RBP3.51□□□□□ -1.85
RPF2YKR081C GPD2P41911 440 aaKnown RBP3.51□□□□□ -1.85
RPF2YKR081C MDM1Q01846 1127 aa3.51□□□□□ -1.85
RPF2YKR081C PLP2Q12017 286 aa3.51□□□□□ -1.85
RPF2YKR081C BUG1Q12191 341 aa3.51□□□□□ -1.85
RPF2YKR081C SWE1P32944 819 aa3.5□□□□□ -1.85
RPF2YKR081C YJR085CP47131 105 aaKnown RBP3.5□□□□□ -1.85
RPF2YKR081C SRB7P47822 140 aa3.5□□□□□ -1.85
RPF2YKR081C NUP116Q02630 1113 aa3.5□□□□□ -1.85
RPF2YKR081C NDE2Q07500 545 aa3.5□□□□□ -1.85
RPF2YKR081C DIS3Q08162 1001 aaKnown RBP3.5□□□□□ -1.85
RPF2YKR081C TPT1Q12272 230 aaKnown RBP3.5□□□□□ -1.85
RPF2YKR081C ATG34Q12292 412 aa3.5□□□□□ -1.85
RPF2YKR081C IZH2Q12442 317 aa3.5□□□□□ -1.85
RPF2YKR081C YCR051WP25631 222 aa3.49□□□□□ -1.85
RPF2YKR081C RRP1P35178 278 aaPredicted RBP3.49□□□□□ -1.85
RPF2YKR081C CHK1P38147 527 aa3.49□□□□□ -1.85
RPF2YKR081C RRP4P38792 359 aaKnown RBP3.49□□□□□ -1.85
RPF2YKR081C YIL029CP40538 142 aa3.49□□□□□ -1.85
RPF2YKR081C YMR155WQ03795 547 aa3.49□□□□□ -1.85
RPF2YKR081C RAX1Q08760 435 aa3.49□□□□□ -1.85
RPF2YKR081C JID1Q12350 301 aa3.49□□□□□ -1.85
RPF2YKR081C URA4P20051 364 aa3.48□□□□□ -1.85
RPF2YKR081C ADA2Q02336 434 aa3.48□□□□□ -1.85
RPF2YKR081C URH1Q04179 340 aa3.48□□□□□ -1.85
RPF2YKR081C ISN1Q99312 450 aa3.48□□□□□ -1.85
RPF2YKR081C HOM3P10869 527 aa3.47□□□□□ -1.85
RPF2YKR081C YCL068CP25593 260 aa3.47□□□□□ -1.85
RPF2YKR081C BRF1P29056 596 aa3.47□□□□□ -1.85
RPF2YKR081C NIP1P32497 812 aaKnown RBP3.47□□□□□ -1.85
RPF2YKR081C MID2P36027 376 aa3.47□□□□□ -1.85
RPF2YKR081C YBR056WP38081 501 aa3.47□□□□□ -1.85
RPF2YKR081C COX14P39103 70 aa3.47□□□□□ -1.85
RPF2YKR081C LSM5P40089 93 aaKnown RBP3.47□□□□□ -1.85
RPF2YKR081C YMR130WQ04223 302 aa3.47□□□□□ -1.85
RPF2YKR081C ROY1Q04847 553 aa3.47□□□□□ -1.85
RPF2YKR081C JNM1P36224 373 aa3.46□□□□□ -1.86
RPF2YKR081C SBE22P38814 852 aa3.46□□□□□ -1.86
RPF2YKR081C DFG10P40526 253 aa3.46□□□□□ -1.86
RPF2YKR081C DCS1Q06151 350 aa3.46□□□□□ -1.86
RPF2YKR081C RRP9Q06506 573 aaKnown RBP3.46□□□□□ -1.86
RPF2YKR081C MED2Q12124 431 aa3.46□□□□□ -1.86
RPF2YKR081C AHC1Q12433 566 aa3.46□□□□□ -1.86
RPF2YKR081C TY1B-AO13527 1196 aaKnown RBP3.45□□□□□ -1.86
RPF2YKR081C ADE4P04046 510 aaKnown RBP3.45□□□□□ -1.86
RPF2YKR081C MSI1P13712 422 aa3.45□□□□□ -1.86
RPF2YKR081C FUR1P18562 216 aaKnown RBP3.45□□□□□ -1.86
RPF2YKR081C RPB5P20434 215 aa3.45□□□□□ -1.86
RPF2YKR081C MIG3P39943 394 aa3.45□□□□□ -1.86
RPF2YKR081C CCE1Q03702 353 aa3.45□□□□□ -1.86
RPF2YKR081C RIF2Q06208 395 aa3.45□□□□□ -1.86
RPF2YKR081C RRG1Q12167 365 aaPredicted RBP3.45□□□□□ -1.86
RPF2YKR081C YGK3Q12222 375 aaPredicted RBP3.45□□□□□ -1.86
RPF2YKR081C AFI1Q99222 893 aa3.45□□□□□ -1.86
RPF2YKR081C IMA3P0CW40 589 aa3.44□□□□□ -1.86
RPF2YKR081C IMA4P0CW41 589 aa3.44□□□□□ -1.86
RPF2YKR081C AAT2P23542 418 aaKnown RBP3.44□□□□□ -1.86
RPF2YKR081C PRR1P28708 518 aa3.44□□□□□ -1.86
RPF2YKR081C PHA2P32452 334 aa3.44□□□□□ -1.86
RPF2YKR081C BYE1P36106 594 aa3.44□□□□□ -1.86
RPF2YKR081C ATP3P38077 311 aaKnown RBP3.44□□□□□ -1.86
RPF2YKR081C RTC2P38279 296 aa3.44□□□□□ -1.86
RPF2YKR081C YFR057WP43625 151 aa3.44□□□□□ -1.86
RPF2YKR081C MRM2P53123 320 aa3.44□□□□□ -1.86
RPF2YKR081C OCA2P53949 197 aa3.44□□□□□ -1.86
RPF2YKR081C ACL4Q03771 387 aa3.44□□□□□ -1.86
RPF2YKR081C MDM36Q06820 579 aa3.44□□□□□ -1.86
RPF2YKR081C IMA2Q08295 589 aa3.44□□□□□ -1.86
RPF2YKR081C YDL012CQ12489 107 aa3.44□□□□□ -1.86
RPF2YKR081C SPT10P35208 640 aa3.43□□□□□ -1.86
RPF2YKR081C SLX1P38324 304 aa3.43□□□□□ -1.86
RPF2YKR081C YGR250CP53316 781 aaKnown RBP3.43□□□□□ -1.86
RPF2YKR081C BNI5P53890 448 aaKnown RBP3.43□□□□□ -1.86
RPF2YKR081C SNT309Q06091 175 aaPredicted RBP3.43□□□□□ -1.86
RPF2YKR081C CMS1Q07897 291 aaKnown RBP3.43□□□□□ -1.86
RPF2YKR081C SMF3Q12078 473 aaPredicted RBP3.43□□□□□ -1.86
RPF2YKR081C TFB1P32776 642 aa3.42□□□□□ -1.86
RPF2YKR081C YPS6P40583 537 aa3.42□□□□□ -1.86
RPF2YKR081C BIR1P47134 954 aa3.42□□□□□ -1.86
RPF2YKR081C RPT4P53549 437 aaKnown RBP3.42□□□□□ -1.86
RPF2YKR081C HOT1Q03213 719 aa3.42□□□□□ -1.86
RPF2YKR081C MMT1Q03218 510 aa3.42□□□□□ -1.86
RPF2YKR081C RTN1Q04947 295 aaKnown RBP3.42□□□□□ -1.86
RPF2YKR081C SIM1P40472 476 aa3.41□□□□□ -1.86
RPF2YKR081C TOM22P49334 152 aa3.41□□□□□ -1.86
RPF2YKR081C MST27P53176 234 aa3.41□□□□□ -1.86
RPF2YKR081C STD1Q02794 444 aa3.41□□□□□ -1.86
RPF2YKR081C MMR1Q06324 491 aa3.41□□□□□ -1.86
RPF2YKR081C CEX1Q12453 761 aa3.41□□□□□ -1.86
RPF2YKR081C MTR10Q99189 972 aa3.41□□□□□ -1.86
RPF2YKR081C COX3P00420 269 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms