Protein–RNA interactions for Protein: Q04947

RTN1, Reticulon-like protein 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTN1Q04947 YML009W-BYML009W-B 477 nt21.09■□□□□ 0.97
RTN1Q04947 NSR1YGR159C 1245 nt20.74■□□□□ 0.91
RTN1Q04947 NOP1YDL014W 984 nt20.59■□□□□ 0.89
RTN1Q04947 YKL036CYKL036C 393 nt19.19■□□□□ 0.66
RTN1Q04947 MDJ1YFL016C 1536 nt18.23■□□□□ 0.51
RTN1Q04947 Q0297Q0297 156 nt18.06■□□□□ 0.48
RTN1Q04947 YJL027CYJL027C 417 nt17.96■□□□□ 0.47
RTN1Q04947 SRX1YKL086W 384 nt17.96■□□□□ 0.47
RTN1Q04947 SCS3YGL126W 1143 nt17.55■□□□□ 0.4
RTN1Q04947 YCR051WYCR051W 669 nt17.09■□□□□ 0.33
RTN1Q04947 YOL085CYOL085C 342 nt16.6■□□□□ 0.25
RTN1Q04947 PKP1YIL042C 1185 nt16.34■□□□□ 0.21
RTN1Q04947 RPP1BYDL130W 321 nt16.22■□□□□ 0.19
RTN1Q04947 DBP2YNL112W 1641 nt16.18■□□□□ 0.18
RTN1Q04947 TRN1tP(UGG)A 72 nt16.11■□□□□ 0.17
RTN1Q04947 SUF9tP(UGG)F 72 nt16.11■□□□□ 0.17
RTN1Q04947 SUF8tP(UGG)H 72 nt16.11■□□□□ 0.17
RTN1Q04947 tP(UGG)LtP(UGG)L 72 nt16.11■□□□□ 0.17
RTN1Q04947 SUF7tP(UGG)M 72 nt16.11■□□□□ 0.17
RTN1Q04947 tP(UGG)N1tP(UGG)N1 72 nt16.11■□□□□ 0.17
RTN1Q04947 tP(UGG)N2tP(UGG)N2 72 nt16.11■□□□□ 0.17
RTN1Q04947 tP(UGG)O1tP(UGG)O1 72 nt16.11■□□□□ 0.17
RTN1Q04947 SUF11tP(UGG)O2 72 nt16.11■□□□□ 0.17
RTN1Q04947 CCC1YLR220W 969 nt15.99■□□□□ 0.15
RTN1Q04947 SCJ1YMR214W 1134 nt15.81■□□□□ 0.12
RTN1Q04947 ATS1YAL020C 1002 nt15.76■□□□□ 0.11
RTN1Q04947 YBR190WYBR190W 312 nt15.48■□□□□ 0.07
RTN1Q04947 PET122YER153C 765 nt15.47■□□□□ 0.07
RTN1Q04947 SCR1SCR1 522 nt15.4■□□□□ 0.06
RTN1Q04947 tP(UGG)O3tP(UGG)O3 72 nt15.33■□□□□ 0.04
RTN1Q04947 RVS167YDR388W 1449 nt15.33■□□□□ 0.04
RTN1Q04947 RTC3YHR087W 336 nt15.19■□□□□ 0.02
RTN1Q04947 RRN5YLR141W 1092 nt15.05■□□□□ -0
RTN1Q04947 SHR5YOL110W 714 nt14.82□□□□□ -0.04
RTN1Q04947 RSB1YOR049C 1065 nt14.82□□□□□ -0.04
RTN1Q04947 YDJ1YNL064C 1230 nt14.81□□□□□ -0.04
RTN1Q04947 YER088W-BYER088W-B 147 nt14.75□□□□□ -0.05
RTN1Q04947 PST2YDR032C 597 nt14.54□□□□□ -0.08
RTN1Q04947 GAR1YHR089C 618 nt14.48□□□□□ -0.09
RTN1Q04947 DEP1YAL013W 1218 nt14.34□□□□□ -0.11
RTN1Q04947 URN1YPR152C 1398 nt14.27□□□□□ -0.12
RTN1Q04947 RPN10YHR200W 807 nt14.14□□□□□ -0.15
RTN1Q04947 YNL208WYNL208W 600 nt14.13□□□□□ -0.15
RTN1Q04947 YKL097CYKL097C 411 nt14.11□□□□□ -0.15
RTN1Q04947 OPI9YLR338W 858 nt14.01□□□□□ -0.17
RTN1Q04947 TIR1YER011W 765 nt13.97□□□□□ -0.17
RTN1Q04947 SHU1YHL006C 453 nt13.91□□□□□ -0.18
RTN1Q04947 SAH1YER043C 1350 nt13.87□□□□□ -0.19
RTN1Q04947 PUT4YOR348C 1884 nt13.87□□□□□ -0.19
RTN1Q04947 SSA1YAL005C 1929 nt13.74□□□□□ -0.21
RTN1Q04947 ARE1YCR048W 1833 nt13.69□□□□□ -0.22
RTN1Q04947 YAL037C-BYAL037C-B 975 nt13.64□□□□□ -0.23
RTN1Q04947 YJR018WYJR018W 363 nt13.63□□□□□ -0.23
RTN1Q04947 PUN1YLR414C 792 nt13.62□□□□□ -0.23
RTN1Q04947 YHR049C-AYHR049C-A 297 nt13.54□□□□□ -0.24
RTN1Q04947 SRB2YHR041C 633 nt13.53□□□□□ -0.24
RTN1Q04947 YOR139CYOR139C 393 nt13.48□□□□□ -0.25
RTN1Q04947 POA1YBR022W 534 nt13.48□□□□□ -0.25
RTN1Q04947 RPP2BYDR382W 333 nt13.44□□□□□ -0.26
RTN1Q04947 YJR120WYJR120W 351 nt13.42□□□□□ -0.26
RTN1Q04947 PTC2YER089C 1395 nt13.42□□□□□ -0.26
RTN1Q04947 WWM1YFL010C 636 nt13.39□□□□□ -0.27
RTN1Q04947 YGR021WYGR021W 873 nt13.39□□□□□ -0.27
RTN1Q04947 NPL3YDR432W 1245 nt13.36□□□□□ -0.27
RTN1Q04947 HOM6YJR139C 1080 nt13.33□□□□□ -0.28
RTN1Q04947 MNP1YGL068W 585 nt13.31□□□□□ -0.28
RTN1Q04947 BUD23YCR047C 828 nt13.27□□□□□ -0.29
RTN1Q04947 NAB2YGL122C 1578 nt13.2□□□□□ -0.3
RTN1Q04947 BDH2YAL061W 1254 nt13.18□□□□□ -0.3
RTN1Q04947 YOL037CYOL037C 354 nt13.18□□□□□ -0.3
RTN1Q04947 YFL021C-AYFL021C-A 855 nt13.17□□□□□ -0.3
RTN1Q04947 RKM5YLR137W 1104 nt13.14□□□□□ -0.31
RTN1Q04947 BSC6YOL137W 1494 nt13.14□□□□□ -0.31
RTN1Q04947 INM2YDR287W 879 nt13.12□□□□□ -0.31
RTN1Q04947 FPR4YLR449W 1179 nt13.09□□□□□ -0.31
RTN1Q04947 DAL1YIR027C 1383 nt13.08□□□□□ -0.31
RTN1Q04947 SSA3YBL075C 1950 nt13.07□□□□□ -0.32
RTN1Q04947 LSM3YLR438C-A 270 nt13.05□□□□□ -0.32
RTN1Q04947 YBL100CYBL100C 315 nt13.04□□□□□ -0.32
RTN1Q04947 FIS1YIL065C 468 nt13.02□□□□□ -0.33
RTN1Q04947 PHO4YFR034C 939 nt12.95□□□□□ -0.34
RTN1Q04947 tM(CAU)CtM(CAU)C 72 nt12.94□□□□□ -0.34
RTN1Q04947 IMT4tM(CAU)E 72 nt12.94□□□□□ -0.34
RTN1Q04947 IMT3tM(CAU)J3 72 nt12.94□□□□□ -0.34
RTN1Q04947 IMT1tM(CAU)O1 72 nt12.94□□□□□ -0.34
RTN1Q04947 IMT2tM(CAU)P 72 nt12.94□□□□□ -0.34
RTN1Q04947 TRM9YML014W 840 nt12.92□□□□□ -0.34
RTN1Q04947 FUN26YAL022C 1554 nt12.88□□□□□ -0.35
RTN1Q04947 YLR281CYLR281C 468 nt12.84□□□□□ -0.35
RTN1Q04947 PUS2YGL063W 1113 nt12.81□□□□□ -0.36
RTN1Q04947 WHI5YOR083W 888 nt12.79□□□□□ -0.36
RTN1Q04947 CCT6YDR188W 1641 nt12.74□□□□□ -0.37
RTN1Q04947 ALF1YNL148C 765 nt12.68□□□□□ -0.38
RTN1Q04947 SUF2tP(AGG)C 72 nt12.65□□□□□ -0.38
RTN1Q04947 SUF10tP(AGG)N 72 nt12.65□□□□□ -0.38
RTN1Q04947 YLR154C-GYLR154C-G 150 nt12.61□□□□□ -0.39
RTN1Q04947 YPS1YLR120C 1710 nt12.59□□□□□ -0.39
RTN1Q04947 YDR095CYDR095C 411 nt12.56□□□□□ -0.4
RTN1Q04947 DSK2YMR276W 1122 nt12.54□□□□□ -0.4
RTN1Q04947 MOT3YMR070W 1473 nt12.53□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms