Protein–RNA interactions for Protein: P28708

PRR1, Serine/threonine-protein kinase PRR1, yeastyeast

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRR1P28708 YML009W-BYML009W-B 477 nt22.07■■□□□ 1.12
PRR1P28708 NSR1YGR159C 1245 nt21.82■■□□□ 1.08
PRR1P28708 NOP1YDL014W 984 nt21.53■■□□□ 1.04
PRR1P28708 YKL036CYKL036C 393 nt20.04■□□□□ 0.8
PRR1P28708 MDJ1YFL016C 1536 nt19.19■□□□□ 0.66
PRR1P28708 Q0297Q0297 156 nt18.94■□□□□ 0.62
PRR1P28708 SRX1YKL086W 384 nt18.84■□□□□ 0.61
PRR1P28708 YJL027CYJL027C 417 nt18.73■□□□□ 0.59
PRR1P28708 SCS3YGL126W 1143 nt18.33■□□□□ 0.52
PRR1P28708 YCR051WYCR051W 669 nt17.86■□□□□ 0.45
PRR1P28708 YOL085CYOL085C 342 nt17.39■□□□□ 0.37
PRR1P28708 DBP2YNL112W 1641 nt17.1■□□□□ 0.33
PRR1P28708 PKP1YIL042C 1185 nt17.08■□□□□ 0.32
PRR1P28708 RPP1BYDL130W 321 nt16.98■□□□□ 0.31
PRR1P28708 TRN1tP(UGG)A 72 nt16.92■□□□□ 0.3
PRR1P28708 SUF9tP(UGG)F 72 nt16.92■□□□□ 0.3
PRR1P28708 SUF8tP(UGG)H 72 nt16.92■□□□□ 0.3
PRR1P28708 tP(UGG)LtP(UGG)L 72 nt16.92■□□□□ 0.3
PRR1P28708 SUF7tP(UGG)M 72 nt16.92■□□□□ 0.3
PRR1P28708 tP(UGG)N1tP(UGG)N1 72 nt16.92■□□□□ 0.3
PRR1P28708 tP(UGG)N2tP(UGG)N2 72 nt16.92■□□□□ 0.3
PRR1P28708 tP(UGG)O1tP(UGG)O1 72 nt16.92■□□□□ 0.3
PRR1P28708 SUF11tP(UGG)O2 72 nt16.92■□□□□ 0.3
PRR1P28708 CCC1YLR220W 969 nt16.75■□□□□ 0.27
PRR1P28708 ATS1YAL020C 1002 nt16.47■□□□□ 0.23
PRR1P28708 SCJ1YMR214W 1134 nt16.47■□□□□ 0.23
PRR1P28708 YBR190WYBR190W 312 nt16.32■□□□□ 0.2
PRR1P28708 PET122YER153C 765 nt16.21■□□□□ 0.19
PRR1P28708 tP(UGG)O3tP(UGG)O3 72 nt16.09■□□□□ 0.17
PRR1P28708 SCR1SCR1 522 nt16.05■□□□□ 0.16
PRR1P28708 RVS167YDR388W 1449 nt16.03■□□□□ 0.16
PRR1P28708 RTC3YHR087W 336 nt15.94■□□□□ 0.14
PRR1P28708 RRN5YLR141W 1092 nt15.78■□□□□ 0.12
PRR1P28708 SHR5YOL110W 714 nt15.56■□□□□ 0.08
PRR1P28708 YDJ1YNL064C 1230 nt15.55■□□□□ 0.08
PRR1P28708 YER088W-BYER088W-B 147 nt15.47■□□□□ 0.07
PRR1P28708 RSB1YOR049C 1065 nt15.46■□□□□ 0.07
PRR1P28708 PST2YDR032C 597 nt15.24■□□□□ 0.03
PRR1P28708 GAR1YHR089C 618 nt15.17■□□□□ 0.02
PRR1P28708 DEP1YAL013W 1218 nt15.05■□□□□ -0
PRR1P28708 URN1YPR152C 1398 nt15□□□□□ -0.01
PRR1P28708 YNL208WYNL208W 600 nt14.85□□□□□ -0.03
PRR1P28708 RPN10YHR200W 807 nt14.79□□□□□ -0.04
PRR1P28708 OPI9YLR338W 858 nt14.76□□□□□ -0.05
PRR1P28708 PUT4YOR348C 1884 nt14.71□□□□□ -0.05
PRR1P28708 YKL097CYKL097C 411 nt14.68□□□□□ -0.06
PRR1P28708 TIR1YER011W 765 nt14.66□□□□□ -0.06
PRR1P28708 SAH1YER043C 1350 nt14.63□□□□□ -0.07
PRR1P28708 SHU1YHL006C 453 nt14.56□□□□□ -0.08
PRR1P28708 SSA3YBL075C 1950 nt14.55□□□□□ -0.08
PRR1P28708 ARE1YCR048W 1833 nt14.5□□□□□ -0.09
PRR1P28708 SSA1YAL005C 1929 nt14.46□□□□□ -0.09
PRR1P28708 YJR018WYJR018W 363 nt14.32□□□□□ -0.12
PRR1P28708 PUN1YLR414C 792 nt14.31□□□□□ -0.12
PRR1P28708 SRB2YHR041C 633 nt14.29□□□□□ -0.12
PRR1P28708 YAL037C-BYAL037C-B 975 nt14.29□□□□□ -0.12
PRR1P28708 YHR049C-AYHR049C-A 297 nt14.26□□□□□ -0.13
PRR1P28708 POA1YBR022W 534 nt14.26□□□□□ -0.13
PRR1P28708 YJR120WYJR120W 351 nt14.19□□□□□ -0.14
PRR1P28708 PTC2YER089C 1395 nt14.13□□□□□ -0.15
PRR1P28708 YOR139CYOR139C 393 nt14.11□□□□□ -0.15
PRR1P28708 RPP2BYDR382W 333 nt14.06□□□□□ -0.16
PRR1P28708 WWM1YFL010C 636 nt14.05□□□□□ -0.16
PRR1P28708 YGR021WYGR021W 873 nt13.99□□□□□ -0.17
PRR1P28708 HOM6YJR139C 1080 nt13.99□□□□□ -0.17
PRR1P28708 BUD23YCR047C 828 nt13.94□□□□□ -0.18
PRR1P28708 MNP1YGL068W 585 nt13.93□□□□□ -0.18
PRR1P28708 NAB2YGL122C 1578 nt13.92□□□□□ -0.18
PRR1P28708 BSC6YOL137W 1494 nt13.9□□□□□ -0.18
PRR1P28708 NPL3YDR432W 1245 nt13.89□□□□□ -0.19
PRR1P28708 BDH2YAL061W 1254 nt13.83□□□□□ -0.2
PRR1P28708 INM2YDR287W 879 nt13.8□□□□□ -0.2
PRR1P28708 YFL021C-AYFL021C-A 855 nt13.8□□□□□ -0.2
PRR1P28708 DAL1YIR027C 1383 nt13.77□□□□□ -0.21
PRR1P28708 RKM5YLR137W 1104 nt13.77□□□□□ -0.21
PRR1P28708 YOL037CYOL037C 354 nt13.75□□□□□ -0.21
PRR1P28708 FIS1YIL065C 468 nt13.73□□□□□ -0.21
PRR1P28708 LSM3YLR438C-A 270 nt13.71□□□□□ -0.21
PRR1P28708 FPR4YLR449W 1179 nt13.71□□□□□ -0.21
PRR1P28708 YBL100CYBL100C 315 nt13.68□□□□□ -0.22
PRR1P28708 PHO4YFR034C 939 nt13.63□□□□□ -0.23
PRR1P28708 tM(CAU)CtM(CAU)C 72 nt13.55□□□□□ -0.24
PRR1P28708 IMT4tM(CAU)E 72 nt13.55□□□□□ -0.24
PRR1P28708 IMT3tM(CAU)J3 72 nt13.55□□□□□ -0.24
PRR1P28708 IMT1tM(CAU)O1 72 nt13.55□□□□□ -0.24
PRR1P28708 IMT2tM(CAU)P 72 nt13.55□□□□□ -0.24
PRR1P28708 FUN26YAL022C 1554 nt13.54□□□□□ -0.24
PRR1P28708 TRM9YML014W 840 nt13.54□□□□□ -0.24
PRR1P28708 YLR281CYLR281C 468 nt13.46□□□□□ -0.25
PRR1P28708 CCT6YDR188W 1641 nt13.41□□□□□ -0.26
PRR1P28708 PUS2YGL063W 1113 nt13.38□□□□□ -0.27
PRR1P28708 WHI5YOR083W 888 nt13.38□□□□□ -0.27
PRR1P28708 YPS1YLR120C 1710 nt13.31□□□□□ -0.28
PRR1P28708 ALF1YNL148C 765 nt13.27□□□□□ -0.29
PRR1P28708 YDR095CYDR095C 411 nt13.25□□□□□ -0.29
PRR1P28708 SUF2tP(AGG)C 72 nt13.25□□□□□ -0.29
PRR1P28708 SUF10tP(AGG)N 72 nt13.25□□□□□ -0.29
PRR1P28708 YLR154C-GYLR154C-G 150 nt13.22□□□□□ -0.29
PRR1P28708 SPT5YML010W 3192 nt13.17□□□□□ -0.3
PRR1P28708 YPR011CYPR011C 981 nt13.16□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms