RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C MTC1P47018 478 aaKnown RBP18.26■□□□□ 0.51
RPF2YKR081C DRS1P32892 752 aaKnown RBP17.04■□□□□ 0.32
RPF2YKR081C FAP1P53971 965 aa16.72■□□□□ 0.27
RPF2YKR081C PRY3P47033 881 aa15.65■□□□□ 0.1
RPF2YKR081C PRI1P10363 409 aa15.44■□□□□ 0.06
RPF2YKR081C AAD16Q02895 342 aa15.41■□□□□ 0.06
RPF2YKR081C ISW2Q08773 1120 aa15.24■□□□□ 0.03
RPF2YKR081C RPG1P38249 964 aaKnown RBP15.07■□□□□ 0
RPF2YKR081C DIP2Q12220 943 aaPredicted RBP14.96□□□□□ -0.01
RPF2YKR081C TSR3Q12094 313 aaKnown RBP14.64□□□□□ -0.07
RPF2YKR081C HAA1Q12753 694 aaKnown RBP14.63□□□□□ -0.07
RPF2YKR081C YCK3P39962 524 aa14.56□□□□□ -0.08
RPF2YKR081C RSE1Q04693 1361 aaKnown RBP14.49□□□□□ -0.09
RPF2YKR081C AVT3P36062 692 aa14.3□□□□□ -0.12
RPF2YKR081C MRPL32P25348 183 aa14.12□□□□□ -0.15
RPF2YKR081C BFR2Q06631 534 aaKnown RBP14.12□□□□□ -0.15
RPF2YKR081C REB1P21538 810 aa14.06□□□□□ -0.16
RPF2YKR081C RPL17AP05740 184 aaKnown RBP14.04□□□□□ -0.16
RPF2YKR081C RPL17BP46990 184 aaKnown RBP14.04□□□□□ -0.16
RPF2YKR081C YGL015CP33199 130 aa13.55□□□□□ -0.24
RPF2YKR081C SPT21P35209 758 aa13.29□□□□□ -0.28
RPF2YKR081C CDC27P38042 758 aa13.28□□□□□ -0.28
RPF2YKR081C YKR023WP36119 530 aaKnown RBP13.22□□□□□ -0.29
RPF2YKR081C HOP09932 586 aa13.03□□□□□ -0.32
RPF2YKR081C DCD1P06773 312 aa12.97□□□□□ -0.33
RPF2YKR081C TFC8Q12308 588 aa12.97□□□□□ -0.33
RPF2YKR081C MAP2P38174 421 aaKnown RBP12.93□□□□□ -0.34
RPF2YKR081C UBP10P53874 792 aaPredicted RBP12.93□□□□□ -0.34
RPF2YKR081C RIM101P33400 625 aa12.86□□□□□ -0.35
RPF2YKR081C SCY1P53009 804 aa12.68□□□□□ -0.38
RPF2YKR081C BCH2P36122 765 aa12.56□□□□□ -0.4
RPF2YKR081C SLX5P32828 619 aaKnown RBP12.52□□□□□ -0.41
RPF2YKR081C TIF4632P39936 914 aaKnown RBP12.51□□□□□ -0.41
RPF2YKR081C OXP1P28273 1286 aa12.42□□□□□ -0.42
RPF2YKR081C TFA1P36100 482 aa12.42□□□□□ -0.42
RPF2YKR081C YIL055CP40523 627 aaKnown RBP12.41□□□□□ -0.42
RPF2YKR081C BUD31P25337 157 aaPredicted RBP12.38□□□□□ -0.43
RPF2YKR081C TGL3P40308 642 aa12.38□□□□□ -0.43
RPF2YKR081C PTP3P40048 928 aa12.37□□□□□ -0.43
RPF2YKR081C EPS1P40557 701 aa12.25□□□□□ -0.45
RPF2YKR081C BDF1P35817 686 aa12.2□□□□□ -0.46
RPF2YKR081C YAH1Q12184 172 aaKnown RBP12.17□□□□□ -0.46
RPF2YKR081C UBP9P39967 754 aa12.12□□□□□ -0.47
RPF2YKR081C RSM7P47150 247 aa12.12□□□□□ -0.47
RPF2YKR081C BBC1P47068 1157 aa12.09□□□□□ -0.47
RPF2YKR081C AI2P03876 854 aa12.02□□□□□ -0.49
RPF2YKR081C SIS1P25294 352 aaKnown RBP11.9□□□□□ -0.5
RPF2YKR081C YLR271WQ06152 274 aa11.86□□□□□ -0.51
RPF2YKR081C YOR238WQ08634 303 aa11.85□□□□□ -0.51
RPF2YKR081C MST1P07236 462 aa11.77□□□□□ -0.53
RPF2YKR081C YAP5P40574 245 aa11.74□□□□□ -0.53
RPF2YKR081C SSP1P38871 571 aa11.73□□□□□ -0.53
RPF2YKR081C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.72□□□□□ -0.53not detected
RPF2YKR081C NSR1P27476 414 aaKnown RBP RIP-Chip data11.71□□□□□ -0.53not detected
RPF2YKR081C YBL029C-AQ3E756 94 aa11.69□□□□□ -0.54
RPF2YKR081C PSD2P53037 1138 aaKnown RBP11.66□□□□□ -0.54
RPF2YKR081C MRM1P25270 412 aa11.6□□□□□ -0.55
RPF2YKR081C WSC3Q12215 556 aa11.56□□□□□ -0.56
RPF2YKR081C GTT3P39996 337 aa11.55□□□□□ -0.56
RPF2YKR081C VNX1P42839 908 aa11.55□□□□□ -0.56
RPF2YKR081C SPP1Q03012 353 aa11.5□□□□□ -0.57
RPF2YKR081C PIB1Q06651 286 aa11.49□□□□□ -0.57
RPF2YKR081C MGA2P40578 1113 aa11.45□□□□□ -0.58
RPF2YKR081C CST9Q06032 482 aa11.44□□□□□ -0.58
RPF2YKR081C RTG3P38165 486 aa11.36□□□□□ -0.59
RPF2YKR081C TIF11P38912 153 aaKnown RBP11.35□□□□□ -0.59
RPF2YKR081C YMR1P47147 688 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
RPF2YKR081C DBP1P24784 617 aaKnown RBP11.28□□□□□ -0.6
RPF2YKR081C VPS29P38759 282 aa11.27□□□□□ -0.61
RPF2YKR081C YFR006WP43590 535 aa11.25□□□□□ -0.61
RPF2YKR081C ULI1P43604 169 aa11.25□□□□□ -0.61
RPF2YKR081C YJL171CP46992 396 aa11.2□□□□□ -0.62
RPF2YKR081C LDB19Q12502 818 aa11.19□□□□□ -0.62
RPF2YKR081C RCR1P38212 213 aa11.17□□□□□ -0.62
RPF2YKR081C MSB4Q12317 492 aa11.17□□□□□ -0.62
RPF2YKR081C EAP1P36041 632 aaKnown RBP11.16□□□□□ -0.62
RPF2YKR081C SET4P42948 560 aa11.16□□□□□ -0.62
RPF2YKR081C STS1P38637 319 aa11.15□□□□□ -0.62
RPF2YKR081C IOC2Q12072 812 aa11.14□□□□□ -0.63
RPF2YKR081C YOL036WQ08206 761 aa11.13□□□□□ -0.63
RPF2YKR081C AIR2Q12476 344 aaKnown RBP11.13□□□□□ -0.63
RPF2YKR081C VMA1P17255 1071 aaKnown RBP11.11□□□□□ -0.63
RPF2YKR081C FKH1P40466 484 aa11.11□□□□□ -0.63
RPF2YKR081C TRP5P00931 707 aaKnown RBP11.05□□□□□ -0.64
RPF2YKR081C SAM3Q08986 587 aa11.01□□□□□ -0.65
RPF2YKR081C RTG1P32607 177 aa10.99□□□□□ -0.65
RPF2YKR081C BMT6Q12291 365 aa10.99□□□□□ -0.65
RPF2YKR081C NCR1Q12200 1170 aa10.95□□□□□ -0.66
RPF2YKR081C GYP5Q12344 894 aa10.94□□□□□ -0.66
RPF2YKR081C YNL035CP53962 389 aaKnown RBP10.93□□□□□ -0.66
RPF2YKR081C TFG1P41895 735 aaPredicted RBP10.89□□□□□ -0.67
RPF2YKR081C SEC61P32915 480 aa10.88□□□□□ -0.67
RPF2YKR081C ABP1P15891 592 aaKnown RBP10.87□□□□□ -0.67
RPF2YKR081C DCW1P36091 449 aa10.87□□□□□ -0.67
RPF2YKR081C HTA1P04911 132 aaKnown RBP10.85□□□□□ -0.67
RPF2YKR081C HTA2P04912 132 aa10.85□□□□□ -0.67
RPF2YKR081C MIF2P35201 549 aa10.85□□□□□ -0.67
RPF2YKR081C RAM2P29703 316 aa10.81□□□□□ -0.68
RPF2YKR081C JIP4Q03361 876 aa10.81□□□□□ -0.68
RPF2YKR081C MAK11P20484 414 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms