RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	TY1B-A	O13527	1196 aa	Known RBP	2.99	□□□□□ -1.93
VMA10	YHR039C-A	COX3	P00420	269 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	SCEI	P03882	235 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	LPD1	P09624	499 aa	Known RBP	2.99	□□□□□ -1.93
VMA10	YHR039C-A	CDC23	P16522	626 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	EXO70	P19658	623 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	NIP1	P32497	812 aa	Known RBP	2.99	□□□□□ -1.93
VMA10	YHR039C-A	YNK1	P36010	153 aa	Known RBP	2.99	□□□□□ -1.93
VMA10	YHR039C-A	RRP3	P38712	501 aa	Known RBP	2.99	□□□□□ -1.93
VMA10	YHR039C-A	YAT2	P40017	923 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	VHS2	P40463	436 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	SAD1	P43589	448 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	OCA2	P53949	197 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	IRC15	Q02733	499 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	RPM2	Q02773	1202 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	YLR456W	Q06199	204 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	AEP3	Q12089	606 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	MTR10	Q99189	972 aa		2.99	□□□□□ -1.93
VMA10	YHR039C-A	ECM25	P32525	599 aa		2.98	□□□□□ -1.93
VMA10	YHR039C-A	SOR1	P35497	357 aa	Known RBP	2.98	□□□□□ -1.93
VMA10	YHR039C-A	SWH1	P35845	1188 aa		2.98	□□□□□ -1.93
VMA10	YHR039C-A	ASC1	P38011	319 aa	Known RBP	2.98	□□□□□ -1.93
VMA10	YHR039C-A	ZTA1	P38230	334 aa	Known RBP	2.98	□□□□□ -1.93
VMA10	YHR039C-A	BZZ1	P38822	633 aa		2.98	□□□□□ -1.93
VMA10	YHR039C-A	DIM1	P41819	318 aa	Known RBP	2.98	□□□□□ -1.93
VMA10	YHR039C-A	TRS85	P46944	698 aa		2.98	□□□□□ -1.93
VMA10	YHR039C-A	DSL1	P53847	754 aa		2.98	□□□□□ -1.93
VMA10	YHR039C-A	YDR387C	Q04162	555 aa		2.98	□□□□□ -1.93
VMA10	YHR039C-A	VPS74	Q06385	345 aa		2.98	□□□□□ -1.93
VMA10	YHR039C-A	SOR2	Q07786	357 aa		2.98	□□□□□ -1.93
VMA10	YHR039C-A	SKS1	Q12505	502 aa		2.98	□□□□□ -1.93
VMA10	YHR039C-A	CAR1	P00812	333 aa	Known RBP	2.97	□□□□□ -1.93
VMA10	YHR039C-A	ADE4	P04046	510 aa	Known RBP	2.97	□□□□□ -1.93
VMA10	YHR039C-A	MRS3	P10566	314 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	YCR022C	P25620	114 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	SEC1	P30619	724 aa	Known RBP	2.97	□□□□□ -1.93
VMA10	YHR039C-A	APE2	P32454	952 aa	Known RBP	2.97	□□□□□ -1.93
VMA10	YHR039C-A	TRS65	P32893	560 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	FRE2	P36033	711 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	RIM2	P38127	377 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	PCA1	P38360	1216 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	PHO86	P46956	311 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	IKS1	P47042	667 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	YGR016W	P53209	190 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	PCP1	P53259	346 aa		2.97	□□□□□ -1.93
VMA10	YHR039C-A	YIF1	P53845	314 aa	Known RBP	2.97	□□□□□ -1.93
VMA10	YHR039C-A	HCR1	Q05775	265 aa	Known RBP	2.97	□□□□□ -1.93
VMA10	YHR039C-A	TPM1	P17536	199 aa	Known RBP	2.96	□□□□□ -1.94
VMA10	YHR039C-A	RPI1	P23250	407 aa	Known RBP	2.96	□□□□□ -1.94
VMA10	YHR039C-A	SMY1	P32364	656 aa	Known RBP	2.96	□□□□□ -1.94
VMA10	YHR039C-A	RRN10	P38204	145 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	FAD1	P38913	306 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	CAJ1	P39101	391 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	HAT2	P39984	401 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	ISC1	P40015	477 aa	Known RBP	2.96	□□□□□ -1.94
VMA10	YHR039C-A	GWT1	P47026	490 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	RHO5	P53879	331 aa	Known RBP	2.96	□□□□□ -1.94
VMA10	YHR039C-A	ARK1	P53974	638 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	YPL107W	Q02873	248 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	PNG1	Q02890	363 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	TAF12	Q03761	539 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	RPN9	Q04062	393 aa	Known RBP	2.96	□□□□□ -1.94
VMA10	YHR039C-A	BUG1	Q12191	341 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	FRE6	Q12473	712 aa		2.96	□□□□□ -1.94
VMA10	YHR039C-A	SPT7	P35177	1332 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	HIS4	P00815	799 aa	Known RBP	2.95	□□□□□ -1.94
VMA10	YHR039C-A	PMR1	P13586	950 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	CTR86	P25355	563 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	YCR100C	P25606	316 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	YCR041W	P37265	110 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	RRP4	P38792	359 aa	Known RBP	2.95	□□□□□ -1.94
VMA10	YHR039C-A	RTT107	P38850	1070 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	MLH1	P38920	769 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	GCD10	P41814	478 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	ELP2	P42935	788 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	YIP1	P53039	248 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	MLC1	P53141	149 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	EOS1	P53938	366 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	PRP42	Q03776	544 aa	Known RBP	2.95	□□□□□ -1.94
VMA10	YHR039C-A	YDR341C	Q05506	607 aa	Known RBP	2.95	□□□□□ -1.94
VMA10	YHR039C-A	SMF3	Q12078	473 aa	Predicted RBP	2.95	□□□□□ -1.94
VMA10	YHR039C-A	NFI1	Q12216	726 aa		2.95	□□□□□ -1.94
VMA10	YHR039C-A	ILV5	P06168	395 aa	Known RBP	2.94	□□□□□ -1.94
VMA10	YHR039C-A	ATS1	P31386	333 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	SPC110	P32380	944 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	RIM1	P32445	135 aa	Known RBP	2.94	□□□□□ -1.94
VMA10	YHR039C-A	NDC1	P32500	655 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	PTR2	P32901	601 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	RSM22	P36056	628 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	OLA1	P38219	394 aa	Known RBP	2.94	□□□□□ -1.94
VMA10	YHR039C-A	STN1	P38960	494 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	YAL037W	P39728	267 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	SHO1	P40073	367 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	GAT2	P40209	560 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	YPS6	P40583	537 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	YGL260W	P53056	76 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	ODC1	Q03028	310 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	YMR317W	Q04893	1140 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	YDR286C	Q05530	114 aa		2.94	□□□□□ -1.94
VMA10	YHR039C-A	SNT309	Q06091	175 aa	Predicted RBP	2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms